BLASTX nr result

ID: Lithospermum22_contig00011846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00011846
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFQ32281.1| 2S seed storage protein [Camelina sativa]               58   3e-06
gb|AFQ32284.1| 2S seed storage protein [Camelina sativa]               56   8e-06

>gb|AFQ32281.1| 2S seed storage protein [Camelina sativa]
          Length = 164

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
 Frame = +2

Query: 29  MASKL-PVFAALFVCFLVLADASFRVTTTVVDEEENPXXXXXXXXXXXXXXXXX-SCHNY 202
           MA+KL  V A L +CFL+   + +R      ++  NP                  +C  +
Sbjct: 1   MANKLFLVGATLALCFLLTNASIYRTVVEFDEDATNPMGPRQRCQREFQQSQHLRACQQF 60

Query: 203 IQRQQRSGRNDENNDW--DILDEMNPQQSVQQCCNELQQIDRDCRC 334
           ++RQ R GR  +  DW  D+     PQQ +QQCCNEL+Q D  C C
Sbjct: 61  MRRQARQGRGGDEYDWEEDMETSRRPQQLLQQCCNELRQEDPVCVC 106


>gb|AFQ32284.1| 2S seed storage protein [Camelina sativa]
          Length = 163

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
 Frame = +2

Query: 29  MASKL-PVFAALFVCFLVLADASFRVTTTVVDEEENPXXXXXXXXXXXXXXXXX-SCHNY 202
           MA+K+  V A L +CFL+   + +R      ++  NP                  +C   
Sbjct: 1   MANKIFLVCATLALCFLLTNASIYRTVVEFDEDATNPMGPRQRCQREFQQSQHLRACQQL 60

Query: 203 IQRQQRSGRNDENNDW--DILDEMNPQQSVQQCCNELQQIDRDCRC 334
           ++RQ R GR DE  DW  D+ +   PQQ +QQCCNEL+Q D  C C
Sbjct: 61  MRRQMRQGRGDEY-DWEEDMENPQRPQQLLQQCCNELRQEDPVCVC 105


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