BLASTX nr result

ID: Lithospermum22_contig00011821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00011821
         (901 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein lig...   146   7e-33
emb|CBI27748.3| unnamed protein product [Vitis vinifera]              146   7e-33
ref|XP_002516203.1| zinc finger protein, putative [Ricinus commu...   145   1e-32
ref|XP_002324718.1| predicted protein [Populus trichocarpa] gi|2...   142   1e-31
ref|NP_190937.1| RING/U-box domain-containing protein [Arabidops...   138   2e-30

>ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-B-like
           [Vitis vinifera]
          Length = 358

 Score =  146 bits (368), Expect = 7e-33
 Identities = 62/103 (60%), Positives = 77/103 (74%)
 Frame = +3

Query: 573 TFKCEICVDDKPMYELFVIKSCNHHYCSECITRYVASKLDDNIPHITCPTTECKGLLDLE 752
           TF CEIC+D KP+   F IK C H YCS+C+T+YVASKL DN+  I+CP   C G+L+ +
Sbjct: 122 TFVCEICIDPKPLNHSFSIKGCPHSYCSDCMTKYVASKLQDNVSRISCPAPNCTGVLEPQ 181

Query: 753 ECQEILPAQVFDRWGDALCESLFPASQKVYCPYKTCSGLLIDD 881
           +C+ ILP+ VFDRWG+ALCE+L   SQK YCPYK CS LLI D
Sbjct: 182 QCRPILPSHVFDRWGNALCEALILGSQKFYCPYKDCSALLIRD 224


>emb|CBI27748.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  146 bits (368), Expect = 7e-33
 Identities = 62/103 (60%), Positives = 77/103 (74%)
 Frame = +3

Query: 573 TFKCEICVDDKPMYELFVIKSCNHHYCSECITRYVASKLDDNIPHITCPTTECKGLLDLE 752
           TF CEIC+D KP+   F IK C H YCS+C+T+YVASKL DN+  I+CP   C G+L+ +
Sbjct: 122 TFVCEICIDPKPLNHSFSIKGCPHSYCSDCMTKYVASKLQDNVSRISCPAPNCTGVLEPQ 181

Query: 753 ECQEILPAQVFDRWGDALCESLFPASQKVYCPYKTCSGLLIDD 881
           +C+ ILP+ VFDRWG+ALCE+L   SQK YCPYK CS LLI D
Sbjct: 182 QCRPILPSHVFDRWGNALCEALILGSQKFYCPYKDCSALLIRD 224


>ref|XP_002516203.1| zinc finger protein, putative [Ricinus communis]
           gi|223544689|gb|EEF46205.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 264

 Score =  145 bits (367), Expect = 1e-32
 Identities = 66/120 (55%), Positives = 84/120 (70%), Gaps = 1/120 (0%)
 Frame = +3

Query: 525 KIDHDDGDLD-STIMLDTFKCEICVDDKPMYELFVIKSCNHHYCSECITRYVASKLDDNI 701
           K DH D D +       TF C+ICV++K + + F +K C H YC +C  RYV SKLDDN+
Sbjct: 51  KSDHTDSDEEHQENNSPTFICDICVEEKALNDSFNLKGCTHFYCIDCTVRYVTSKLDDNL 110

Query: 702 PHITCPTTECKGLLDLEECQEILPAQVFDRWGDALCESLFPASQKVYCPYKTCSGLLIDD 881
             I+CP ++C+G+L+ E C++ILP  VFDRWG ALCESL   SQK YCP+K CSGLLIDD
Sbjct: 111 ISISCPGSDCEGMLEPEYCRQILPQDVFDRWGIALCESLIDGSQKFYCPFKDCSGLLIDD 170


>ref|XP_002324718.1| predicted protein [Populus trichocarpa] gi|222866152|gb|EEF03283.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score =  142 bits (358), Expect = 1e-31
 Identities = 65/145 (44%), Positives = 94/145 (64%), Gaps = 2/145 (1%)
 Frame = +3

Query: 453 EDEVHLIDDLPP--PRKRNKCETSLSKIDHDDGDLDSTIMLDTFKCEICVDDKPMYELFV 626
           +D++ ++D LP   P ++ K  T +  +       +S I  D F C+ICV+   +   F+
Sbjct: 56  DDDIKVLDFLPEVIPSRKQKEPTFIESVAEKGQSSNSQIDPD-FVCQICVEPTILKNSFL 114

Query: 627 IKSCNHHYCSECITRYVASKLDDNIPHITCPTTECKGLLDLEECQEILPAQVFDRWGDAL 806
           IK C H YC+EC+ +YV+SKL +NI  I CP  +CKG L+ E+C+ +LP  VFDRWG+AL
Sbjct: 115 IKGCTHAYCTECMVKYVSSKLQENITKICCPVPDCKGALEPEDCRSVLPENVFDRWGNAL 174

Query: 807 CESLFPASQKVYCPYKTCSGLLIDD 881
           CE++   SQK YCP+K CS +LIDD
Sbjct: 175 CEAVILGSQKFYCPFKDCSAMLIDD 199


>ref|NP_190937.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|6729520|emb|CAB67676.1| putative protein [Arabidopsis
           thaliana] gi|21536688|gb|AAM61020.1| unknown
           [Arabidopsis thaliana] gi|332645607|gb|AEE79128.1|
           RING/U-box domain-containing protein [Arabidopsis
           thaliana]
          Length = 320

 Score =  138 bits (348), Expect = 2e-30
 Identities = 68/147 (46%), Positives = 92/147 (62%)
 Frame = +3

Query: 432 DLNLDYIEDEVHLIDDLPPPRKRNKCETSLSKIDHDDGDLDSTIMLDTFKCEICVDDKPM 611
           DL+L   ED+   I    PP  R K ++S SK               TF CEICVD K +
Sbjct: 78  DLDLYDDEDDDIRILCFAPPIHREKGQSSSSKTA-------------TFDCEICVDSKSI 124

Query: 612 YELFVIKSCNHHYCSECITRYVASKLDDNIPHITCPTTECKGLLDLEECQEILPAQVFDR 791
            E F I  C+H YC++C+++Y+A+KL DNI  I CP + C G L+ ++C++ILP +VFDR
Sbjct: 125 IESFRIGGCSHFYCNDCVSKYIAAKLQDNILSIECPVSGCSGRLEPDQCRQILPKEVFDR 184

Query: 792 WGDALCESLFPASQKVYCPYKTCSGLL 872
           WGDALCE++   S+K YCPYK CS L+
Sbjct: 185 WGDALCEAVVMRSKKFYCPYKDCSALV 211


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