BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00011787
         (1131 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|2235275...   167   4e-39
ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycin...   166   1e-38
ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like prote...   164   3e-38
ref|XP_003627334.1| U6 snRNA-associated Sm-like protein LSm1 [Me...   163   6e-38
ref|NP_566476.1| U6 snRNA-associated Sm-like protein LSm1 [Arabi...   162   2e-37

>ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|223527535|gb|EEF29658.1| lsm1,
           putative [Ricinus communis]
          Length = 128

 Score =  167 bits (423), Expect = 4e-39
 Identities = 87/128 (67%), Positives = 93/128 (72%)
 Frame = +1

Query: 280 MSWASPEEIFLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACDRVIVGEL 459
           MSWA PE+I+LSTSLASY                  LRSFDQFANAVLEGAC+RVIVG+L
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERVIVGDL 60

Query: 460 YCDIPLGLYVIRGENVVLIXXXXXXXXXXXXHMTRVSVDEIRRAQKVERDAWDLKGTMRK 639
           YCDIPLGLY+IRGENVVLI            HMTRVS  EIRRAQK ERDA DLKGTMRK
Sbjct: 61  YCDIPLGLYIIRGENVVLIGELDLEKEELPPHMTRVSAAEIRRAQKAERDATDLKGTMRK 120

Query: 640 RMEFLDMD 663
           RMEFLD+D
Sbjct: 121 RMEFLDLD 128


>ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycine max]
           gi|255628281|gb|ACU14485.1| unknown [Glycine max]
          Length = 128

 Score =  166 bits (420), Expect = 1e-38
 Identities = 87/128 (67%), Positives = 93/128 (72%)
 Frame = +1

Query: 280 MSWASPEEIFLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACDRVIVGEL 459
           MSWA PE+I+LSTSLASY                 TLRSFDQFANAVLEGAC+RVIVG+L
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 60

Query: 460 YCDIPLGLYVIRGENVVLIXXXXXXXXXXXXHMTRVSVDEIRRAQKVERDAWDLKGTMRK 639
           YCDIPLGLYVIRGENVVLI            HMTRVS  EI+RAQK ER+A DLKGTMRK
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELDLEREELPEHMTRVSTAEIKRAQKAEREASDLKGTMRK 120

Query: 640 RMEFLDMD 663
           RMEFLD D
Sbjct: 121 RMEFLDFD 128


>ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis
           vinifera] gi|147803430|emb|CAN62239.1| hypothetical
           protein VITISV_033727 [Vitis vinifera]
           gi|297742980|emb|CBI35847.3| unnamed protein product
           [Vitis vinifera]
          Length = 128

 Score =  164 bits (416), Expect = 3e-38
 Identities = 86/128 (67%), Positives = 93/128 (72%)
 Frame = +1

Query: 280 MSWASPEEIFLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACDRVIVGEL 459
           MSWA PE+I+LSTSLASY                  LRSFDQFANAVLEGAC+RVIVG+L
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDNRKLLGILRSFDQFANAVLEGACERVIVGDL 60

Query: 460 YCDIPLGLYVIRGENVVLIXXXXXXXXXXXXHMTRVSVDEIRRAQKVERDAWDLKGTMRK 639
           YCDIPLGLYVIRGENVVLI            HMTRVS  EI+RAQK ER+A DLKGTMRK
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELDLEKEELPPHMTRVSAAEIKRAQKAEREASDLKGTMRK 120

Query: 640 RMEFLDMD 663
           RMEFLD+D
Sbjct: 121 RMEFLDLD 128


>ref|XP_003627334.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
           gi|355521356|gb|AET01810.1| U6 snRNA-associated Sm-like
           protein LSm1 [Medicago truncatula]
          Length = 131

 Score =  163 bits (413), Expect = 6e-38
 Identities = 87/131 (66%), Positives = 96/131 (73%), Gaps = 3/131 (2%)
 Frame = +1

Query: 280 MSWASPEEIFLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACDRVIVGEL 459
           MSWA+PE+++LSTSLASY                 TLRSFDQFANAVLEGAC+RVIVG+L
Sbjct: 1   MSWAAPEDLYLSTSLASYLDKKLLILLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 60

Query: 460 YCDIPLGLYVIRGENVVLIXXXXXXXXXXXXHMTRVSVDEIR---RAQKVERDAWDLKGT 630
           YCDIPLGLYVIRGENVVLI            HMTRV  +EIR   RAQKVERDA +LKGT
Sbjct: 61  YCDIPLGLYVIRGENVVLIGEMDVEREELPPHMTRVPTEEIRRGIRAQKVERDASELKGT 120

Query: 631 MRKRMEFLDMD 663
           MRKRMEFLD+D
Sbjct: 121 MRKRMEFLDLD 131


>ref|NP_566476.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana]
           gi|30682974|ref|NP_850580.1| U6 snRNA-associated Sm-like
           protein LSm1 [Arabidopsis thaliana]
           gi|21536995|gb|AAM61336.1| Sm protein, putative
           [Arabidopsis thaliana] gi|27754337|gb|AAO22620.1|
           putative Sm protein [Arabidopsis thaliana]
           gi|28393853|gb|AAO42334.1| putative Sm protein
           [Arabidopsis thaliana] gi|332641944|gb|AEE75465.1| U6
           snRNA-associated Sm-like protein LSm1 [Arabidopsis
           thaliana] gi|332641945|gb|AEE75466.1| U6
           snRNA-associated Sm-like protein LSm1 [Arabidopsis
           thaliana]
          Length = 128

 Score =  162 bits (409), Expect = 2e-37
 Identities = 86/128 (67%), Positives = 92/128 (71%)
 Frame = +1

Query: 280 MSWASPEEIFLSTSLASYXXXXXXXXXXXXXXXXXTLRSFDQFANAVLEGACDRVIVGEL 459
           MSWA PEEI+LSTSLASY                 TLRSFDQFANAVLEGAC+RVIVGE 
Sbjct: 1   MSWAGPEEIYLSTSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQ 60

Query: 460 YCDIPLGLYVIRGENVVLIXXXXXXXXXXXXHMTRVSVDEIRRAQKVERDAWDLKGTMRK 639
           YCDIPLGLYVIRGENVVLI            HM RVS  EI+RAQKVER+A +L+GTMRK
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELDTEREELPPHMIRVSEAEIKRAQKVEREASELRGTMRK 120

Query: 640 RMEFLDMD 663
           RMEFLD D
Sbjct: 121 RMEFLDFD 128