BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00011689
         (2100 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_828978.1| replication factor A 51kDa subunit [Trypanosoma...    61   1e-06
ref|XP_002866409.1| hypothetical protein ARALYDRAFT_496254 [Arab...    57   9e-06

>ref|XP_828978.1| replication factor A 51kDa subunit [Trypanosoma brucei TREU927]
            gi|70834364|gb|EAN79866.1| replication factor A, 51kDa
            subunit, putative [Trypanosoma brucei brucei strain 927/4
            GUTat10.1] gi|261334907|emb|CBH17901.1| replication
            factor A, 51kDa subunit, putative [Trypanosoma brucei
            gambiense DAL972]
          Length = 463

 Score = 61.2 bits (147), Expect = 1e-06
 Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 9/147 (6%)
 Frame = +2

Query: 1073 GVSLSSKNSSSFTINPPIEAVAELKSWFDSLPQSDLQNIMIDQSIAISKELVCKGSMEVY 1252
            GV+LS+   SSF +NP I  V +L+ WF+S    D+ ++ +  + A+        S E Y
Sbjct: 215  GVTLSTTMQSSFDVNPNIPDVKKLREWFESTGGRDVSSLSMQGNNALG----LASSGETY 270

Query: 1253 T-VAEIDNLLESG-------DYWVKGFLQLSEEHQKLFYVGCSNCHSKIDIEDA-GIHYQ 1405
                 ID++   G       DY     + +  +    +Y  C  C+ K+ +E A G  ++
Sbjct: 271  RGYKYIDDITTEGLGKGPKPDYIDLRCVPVYLKQDTQWYDACPQCNKKVMLEGAMGDRFR 330

Query: 1406 CHVCNKNIVTTLRPLVAMIVSDHTSTV 1486
            C  C+++IV T R LV++ V+D+ S V
Sbjct: 331  CEKCDQSIVPTQRYLVSIQVTDNVSQV 357


>ref|XP_002866409.1| hypothetical protein ARALYDRAFT_496254 [Arabidopsis lyrata subsp.
            lyrata] gi|297312244|gb|EFH42668.1| hypothetical protein
            ARALYDRAFT_496254 [Arabidopsis lyrata subsp. lyrata]
          Length = 631

 Score = 56.6 bits (135), Expect(2) = 9e-06
 Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 11/176 (6%)
 Frame = +2

Query: 1073 GVSLSSKNSSSFTINPPIEAVAELKSWFDSLPQSDLQNIMIDQSIAISKELVCKGSMEVY 1252
            GVSLS+ + S+  INP      +LKSWFDS    ++    I   ++ S +    GS  +Y
Sbjct: 396  GVSLSTISRSNVVINPESPEAKKLKSWFDS-EGKEISMSSIGSGMSPSSK---NGSRSMY 451

Query: 1253 T----VAEIDNLLESGD-----YWVKGFLQLSEEHQKLFYVGCSNCHSKI-DIEDAGIHY 1402
            T    ++ I +    G+     +  + ++   +  Q ++Y  C  C+ K+ +  D+G  Y
Sbjct: 452  TDRVLLSHITSNPSLGEEKPVFFSTRAYISFIKPDQTMWYQACKTCNKKVTEALDSG--Y 509

Query: 1403 QCHVCNKNI-VTTLRPLVAMIVSDHTSTVKAIAMGDTTETILQNSISNIAKLTKSG 1567
             C  C K     +LR ++A+ V+D +      +  D  E IL  S  ++ KL   G
Sbjct: 510  WCEGCQKKYEECSLRYIMAVKVTDSSGETWISSFNDEAEKILGCSADDLNKLRSEG 565



 Score = 21.2 bits (43), Expect(2) = 9e-06
 Identities = 13/45 (28%), Positives = 19/45 (42%)
 Frame = +1

Query: 865 KIPIKVSLWEEMLFAMGPTLETAGRNLSVVVAIRLTVKNYGGKKL 999
           K  + VSLW ++   +G  L        VV    L V ++ G  L
Sbjct: 355 KKTVVVSLWNDLATGIGQELLDMADKSPVVAIKSLKVGDFQGVSL 399