BLASTX nr result
ID: Lithospermum22_contig00011662
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00011662
(2006 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ... 645 0.0
ref|XP_002333134.1| predicted protein [Populus trichocarpa] gi|2... 598 e-168
ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [... 589 e-165
ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,... 587 e-165
ref|XP_003602198.1| RNA polymerase sigma factor rpoD [Medicago t... 586 e-165
>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
gi|302143685|emb|CBI22546.3| unnamed protein product
[Vitis vinifera]
Length = 518
Score = 645 bits (1663), Expect = 0.0
Identities = 341/519 (65%), Positives = 407/519 (78%), Gaps = 6/519 (1%)
Frame = -2
Query: 1828 MGVVTVSSSAT--RTRLGLNSIFSTDTTPLKRMSVVSFKTDKPKNASLIVTQESLSLPRD 1655
MGVVTVSSSA+ RT GLN+ FS TPL+R V++FK DK KN +L+ E + LP +
Sbjct: 1 MGVVTVSSSASASRTPFGLNAKFSNHQTPLRRPLVLAFKADKAKNIALVTPHEPIPLPIE 60
Query: 1654 NSKGNKKKLRQAKKKPERVQATTIDEVAPTTIELDYSEAAAKLESIYKRCHESSSCDTLV 1475
SK +KK+LR+A K +RV+A + DEV+P ++ELDY+EAAAKLE+IYK + +
Sbjct: 61 TSKDHKKRLRRASKPSKRVKAVSTDEVSPCSVELDYNEAAAKLENIYKLSPATDVSEAED 120
Query: 1474 KDCEAKRGRDSRKRPV----EAVKDITDSVVRSRKNKAKRLSLDKRISLRTXXXXXXXXX 1307
+ +RGR RKR +A K+++D+VVR K KRLSL+KRI+L
Sbjct: 121 LERVVRRGRQRRKRVTLADDKAEKEVSDNVVRIHNKKPKRLSLEKRIALSKMKQEKAVAS 180
Query: 1306 SQKIRSREDEEVEKIHRLLREYANSSDIVSLDWKKMKIPPVLPSSEHVWLFKLMQPMKEI 1127
QK R ++E+ E I L+REY+ S+D+VSLDWKKMKIPPVLP SEH WLFKLMQPMK +
Sbjct: 181 IQKKRDSKNED-ENIDVLVREYSASTDLVSLDWKKMKIPPVLPPSEHAWLFKLMQPMKGL 239
Query: 1126 LEVKKNLKNDLGREPTDGESAQAFNVHLFELKKNMEVGQAARNKLIKHNLRLVLFVMNKY 947
LEVK NL+ DLGREPTDGE A+A ++ +++++MEVGQAARNKLIKHNLRLVLFV+NKY
Sbjct: 240 LEVKDNLQKDLGREPTDGELAEAMSMSAVQVRRHMEVGQAARNKLIKHNLRLVLFVINKY 299
Query: 946 FQDFVQGPKFQDLCQAGVKGLITAIDRFEPNRRLRLSTYGLFWIRHAIIRSMTVSSFTKV 767
FQ+F GPKFQDLCQAGVKGLITAIDRFEP R RLSTYGLFWIRHAI+RSMT+SSFT+V
Sbjct: 300 FQEFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIMRSMTLSSFTRV 359
Query: 766 PFGLESVRVEIQKAKLELLFELQRLPTEIEIIERVRISPERYNEVMNASKSAVSLNARHS 587
FGLESVRVEIQ+AKLELLF+LQRLPTE EIIE+V ISPERY+EVM ASKS +SL+ARH+
Sbjct: 360 SFGLESVRVEIQRAKLELLFKLQRLPTEEEIIEKVGISPERYHEVMRASKSVLSLHARHA 419
Query: 586 ITQEEFINGITDVDGVEGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTL 407
TQEE+INGITDV+GV GD+ RQ A LKPKESLV+RQRYGLDGKGDRTL
Sbjct: 420 TTQEEYINGITDVEGVGGDRGRQLALLRLALDDVLDSLKPKESLVMRQRYGLDGKGDRTL 479
Query: 406 GEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRQYVF 290
GEIAGNL+ISREMVRKHEVKALMKLKHP RVDYLRQY+F
Sbjct: 480 GEIAGNLSISREMVRKHEVKALMKLKHPARVDYLRQYIF 518
>ref|XP_002333134.1| predicted protein [Populus trichocarpa] gi|222834948|gb|EEE73397.1|
predicted protein [Populus trichocarpa]
Length = 512
Score = 598 bits (1541), Expect = e-168
Identities = 325/516 (62%), Positives = 391/516 (75%), Gaps = 4/516 (0%)
Frame = -2
Query: 1828 MGVVTVSSSATRTRLGLNSIFSTDTTPLKRMSVVSFKTDKPKNASLIVTQESLSLPRDNS 1649
MGVV+VSSSA+RT LGL++ FST + KR +V+FK DK N SL+ E + LP + +
Sbjct: 1 MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKADKSNNTSLVAPHEQIPLPVETT 60
Query: 1648 KGNKKKLRQAKKKPERVQATTIDEVAPTTIELDYSEAAAKLESIYKRCHESSSCDTLVKD 1469
KG KK+L ++KK R++A EV+P T+ +DY+EAAAKLE+IYK + + D
Sbjct: 61 KG-KKRLGKSKKSSNRLKAVRT-EVSPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDAS 118
Query: 1468 CEAKRGRDSRKRPVEAVKDITDS----VVRSRKNKAKRLSLDKRISLRTXXXXXXXXXSQ 1301
+RGR +++ E K+ D +VR+R KAKRLSL+KRISLR +
Sbjct: 119 GVIRRGRQRKRKISEGGKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVSSAG 178
Query: 1300 KIRSREDEEVEKIHRLLREYANSSDIVSLDWKKMKIPPVLPSSEHVWLFKLMQPMKEILE 1121
K + R++E EKI L+REY+ S+D+VSLDWKKMKIPPVL SSEHVWLFKLMQPMK +L+
Sbjct: 179 KRKDRKNEN-EKIDDLVREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQ 237
Query: 1120 VKKNLKNDLGREPTDGESAQAFNVHLFELKKNMEVGQAARNKLIKHNLRLVLFVMNKYFQ 941
VK++L+ +LG EPTD E A+A N+ + +++K + VG+AARNKLIKHNLRLVLFV+ KYFQ
Sbjct: 238 VKEHLQENLGGEPTDVELAKAINMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKYFQ 297
Query: 940 DFVQGPKFQDLCQAGVKGLITAIDRFEPNRRLRLSTYGLFWIRHAIIRSMTVSSFTKVPF 761
DF G KFQD CQAGVKGLITAIDRFEP RR RLSTYGLFWIRHAIIRSMT+SSFT+V F
Sbjct: 298 DFANGTKFQDFCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSF 357
Query: 760 GLESVRVEIQKAKLELLFELQRLPTEIEIIERVRISPERYNEVMNASKSAVSLNARHSIT 581
GLES+R EIQKAKLEL F+L+R P E EIIE+VRISPERY+EV ASK +SL++RH T
Sbjct: 358 GLESIRSEIQKAKLELWFQLKRQPMEDEIIEKVRISPERYHEVTRASKPVLSLHSRHKTT 417
Query: 580 QEEFINGITDVDGVEGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGE 401
QEEFI GI DVDG GD RRQ A LKPKESLV+RQRYGLDGKGDRTLGE
Sbjct: 418 QEEFIGGIADVDG--GDDRRQSALLRLALDDVLDSLKPKESLVVRQRYGLDGKGDRTLGE 475
Query: 400 IAGNLNISREMVRKHEVKALMKLKHPTRVDYLRQYV 293
IAGNLNISREMVRKHEVKALMKLKHPTRVDYLR+YV
Sbjct: 476 IAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYV 511
>ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223547495|gb|EEF48990.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 501
Score = 589 bits (1518), Expect = e-165
Identities = 319/516 (61%), Positives = 387/516 (75%), Gaps = 4/516 (0%)
Frame = -2
Query: 1828 MGVVTVSSSATRTRLGLNSIFSTDTTPLKRMSVVSFKTDKPKNASLIVTQESLSLPRDNS 1649
MGVVT SSSA RT LGL+ FST + +KR VV+FK DK + L+ +E LP + S
Sbjct: 1 MGVVTASSSAARTPLGLSLKFSTYRSTVKRSLVVAFKEDKANDIILVPPRERTPLPIETS 60
Query: 1648 KGNKKKLRQAKKKPERVQATTIDEVAPTTIELDYSEAAAKLESIYKRCHESSSCDTLVKD 1469
KG K++ T EV+ T+E+DY+EAAAKLE+IYK + + D +
Sbjct: 61 KGKKRR------------GKTNREVSSGTLEVDYNEAAAKLENIYKLSPATDTSDVDING 108
Query: 1468 CEAKRGRDSRKRPVE----AVKDITDSVVRSRKNKAKRLSLDKRISLRTXXXXXXXXXSQ 1301
++GR +++ E A + ++VR+R K KRLSLDKRI+L+ +
Sbjct: 109 L-IRKGRQRKRKTGEGDEKAENRTSRTIVRNRAKKTKRLSLDKRIALKKNEEEEVVGPIR 167
Query: 1300 KIRSREDEEVEKIHRLLREYANSSDIVSLDWKKMKIPPVLPSSEHVWLFKLMQPMKEILE 1121
K + +D+ EKI L+R Y+ S+++VSLDW+KMKIPPVLPS+EH WLFKLMQPMK +L
Sbjct: 168 KKKDSKDDN-EKIEELVRTYSASTNLVSLDWRKMKIPPVLPSTEHAWLFKLMQPMKTLLP 226
Query: 1120 VKKNLKNDLGREPTDGESAQAFNVHLFELKKNMEVGQAARNKLIKHNLRLVLFVMNKYFQ 941
VK +L+ +LGR+PTDGE A+A N+++ +++K +EVG+AARNKLIKHNLRLV+FVMNKYFQ
Sbjct: 227 VKADLQKNLGRDPTDGELAEATNMNVEKVRKQLEVGRAARNKLIKHNLRLVMFVMNKYFQ 286
Query: 940 DFVQGPKFQDLCQAGVKGLITAIDRFEPNRRLRLSTYGLFWIRHAIIRSMTVSSFTKVPF 761
DF GP+FQDLCQAGVKGLITAIDRFEP RR +LSTY LFWIRHAIIRSMT+SSFTKV F
Sbjct: 287 DFANGPRFQDLCQAGVKGLITAIDRFEPQRRFQLSTYSLFWIRHAIIRSMTLSSFTKVSF 346
Query: 760 GLESVRVEIQKAKLELLFELQRLPTEIEIIERVRISPERYNEVMNASKSAVSLNARHSIT 581
GLESVR EIQKAKLELL ELQR PTE EIIERV IS ERY+EV+ A+K A+SL+ARH++T
Sbjct: 347 GLESVRTEIQKAKLELLIELQRRPTEEEIIERVGISAERYHEVIRAAKPALSLHARHAVT 406
Query: 580 QEEFINGITDVDGVEGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGE 401
QEEFINGITD+DG GD RRQPA LKPKESLVIRQRYGLDGKGDRTLGE
Sbjct: 407 QEEFINGITDIDG--GDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 464
Query: 400 IAGNLNISREMVRKHEVKALMKLKHPTRVDYLRQYV 293
IAGNLNISREMVRK+EVKALMKLKHP RVDYLR+YV
Sbjct: 465 IAGNLNISREMVRKYEVKALMKLKHPARVDYLRRYV 500
>ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 514
Score = 587 bits (1512), Expect = e-165
Identities = 311/516 (60%), Positives = 384/516 (74%), Gaps = 4/516 (0%)
Frame = -2
Query: 1828 MGVVTVSSSATRTRLGLNSIFSTDTTPLKRMSVVSFKTDKPKNASLIVTQESLSLPRDNS 1649
MGVVTVSS+A RT L FS ++ LKR S+V+FK DK N +L+ E ++LP +++
Sbjct: 1 MGVVTVSSAAARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60
Query: 1648 KGNKKKLRQAKKKPERVQATTIDEVAPTTIELDYSEAAAKLESIYKRCHESSSCDTLVKD 1469
KK+ K +RV+A IDE P +++LDY+EAAAKLE+I+K + D KD
Sbjct: 61 NRRKKRSGNTSKPLKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKD 120
Query: 1468 CEAKRGRDSRKRPVEAVKDITDSVVRSRKNKAKRLSLDKRISLRTXXXXXXXXXSQKIRS 1289
+KRG+ KR ++ D +VR++ + KRL LDKRI+L+ +K +
Sbjct: 121 GRSKRGQ---KRSKKSANRPGDGIVRNQTKRIKRLDLDKRIALKNKKEGKAVALLRKQKD 177
Query: 1288 REDEEVE----KIHRLLREYANSSDIVSLDWKKMKIPPVLPSSEHVWLFKLMQPMKEILE 1121
++E E +I RL+R+Y+ S+D+VSLDWKKMKIPPVLPSSEH LFKL+QPMK ++E
Sbjct: 178 TKNEADEIDDDEIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALVE 237
Query: 1120 VKKNLKNDLGREPTDGESAQAFNVHLFELKKNMEVGQAARNKLIKHNLRLVLFVMNKYFQ 941
V++ L+ LGREPT+GE A A N+++ ++++ +EVG+AARNKLIKHNLRLVLFV+NKYF+
Sbjct: 238 VQEELQKGLGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFE 297
Query: 940 DFVQGPKFQDLCQAGVKGLITAIDRFEPNRRLRLSTYGLFWIRHAIIRSMTVSSFTKVPF 761
DF GPKFQDLCQAGVKGLITAIDRFEP R+ RLSTY LFWIRHAIIRSMT+SSFT+V F
Sbjct: 298 DFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSF 357
Query: 760 GLESVRVEIQKAKLELLFELQRLPTEIEIIERVRISPERYNEVMNASKSAVSLNARHSIT 581
GL+SVRVEIQ+AKLELL EL RLPTE EI +V IS ERY EVM A+K SL++RHS T
Sbjct: 358 GLDSVRVEIQRAKLELLCELHRLPTEGEITAKVGISQERYLEVMRATKPVYSLHSRHSTT 417
Query: 580 QEEFINGITDVDGVEGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGE 401
EE INGITDV+G GD RRQPA LKPKESLVIRQRYGLDGKG+RTLGE
Sbjct: 418 SEELINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGE 477
Query: 400 IAGNLNISREMVRKHEVKALMKLKHPTRVDYLRQYV 293
IAGNLNISREMVRKHEVKALMKLKHP RVDYLR+Y+
Sbjct: 478 IAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYL 513
>ref|XP_003602198.1| RNA polymerase sigma factor rpoD [Medicago truncatula]
gi|355491246|gb|AES72449.1| RNA polymerase sigma factor
rpoD [Medicago truncatula]
Length = 514
Score = 586 bits (1510), Expect = e-165
Identities = 309/514 (60%), Positives = 388/514 (75%), Gaps = 2/514 (0%)
Frame = -2
Query: 1828 MGVVTVSSSATRTRLGLNSIFSTDTTPLKRMSVVSFKTDKPKNASLIVTQESLSLPRDNS 1649
MGVVTVSSSA RT LGLN+ FST LKR V+FK DK + +L+ TQE + +
Sbjct: 1 MGVVTVSSSAARTPLGLNAKFSTHHPVLKRPLTVAFKGDKQNDTALVATQEKIPTQVKPA 60
Query: 1648 KGNKKKLRQAKKKPERVQATTIDEVAPTTIELDYSEAAAKLESIYKRCHESSSCDTLVKD 1469
K +KK++ + K P++ +A +E P+++++DY+EAAA LE+IYK + CD +
Sbjct: 61 KTHKKRIAKTNKLPKKPRAVCTEETFPSSLDVDYNEAAAILENIYKLSPTTDICDADYIE 120
Query: 1468 CEAKRGRDSRKRPVEAVKDITDS--VVRSRKNKAKRLSLDKRISLRTXXXXXXXXXSQKI 1295
+ KR K+ + K+ ++S VVR++K KAKR++LD+RI+L+T ++K
Sbjct: 121 RKIKRVSRRGKKIGDVSKEDSNSDRVVRNQKTKAKRMNLDERIALKTSENSEDVIPTRKK 180
Query: 1294 RSREDEEVEKIHRLLREYANSSDIVSLDWKKMKIPPVLPSSEHVWLFKLMQPMKEILEVK 1115
R+ VEKI LLREY+ +D+VSLDWKKMKIPPVLPSSEH +LFKLMQPMK +L+VK
Sbjct: 181 RNPRSR-VEKIDELLREYSVPADLVSLDWKKMKIPPVLPSSEHAFLFKLMQPMKALLQVK 239
Query: 1114 KNLKNDLGREPTDGESAQAFNVHLFELKKNMEVGQAARNKLIKHNLRLVLFVMNKYFQDF 935
+L+ +L REPT+ E A A N+H ++KK +EVG+AARNKLIKHNLRLVLFV+N+YF DF
Sbjct: 240 DDLQKELEREPTEDEIADATNMHTTQVKKAIEVGRAARNKLIKHNLRLVLFVINRYFSDF 299
Query: 934 VQGPKFQDLCQAGVKGLITAIDRFEPNRRLRLSTYGLFWIRHAIIRSMTVSSFTKVPFGL 755
P+FQDLCQAGVKGLIT+IDRFEPNRR RLSTY LFWIRHAIIRSMT++SF++VPFGL
Sbjct: 300 ANSPRFQDLCQAGVKGLITSIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLASFSRVPFGL 359
Query: 754 ESVRVEIQKAKLELLFELQRLPTEIEIIERVRISPERYNEVMNASKSAVSLNARHSITQE 575
ESVR EI++AK+EL F+LQR PTE EIIE+V +SPERY +VM ASK +SL++RH TQE
Sbjct: 360 ESVRAEIRRAKIELSFQLQRSPTEEEIIEKVHVSPERYRDVMKASKPLLSLHSRHLTTQE 419
Query: 574 EFINGITDVDGVEGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLGEIA 395
EFING+ D GV+GD RRQPA LKPKE+LVIRQR+GLDGKGDRTLGEIA
Sbjct: 420 EFINGVVDDGGVDGDNRRQPALLRLALDDVLDSLKPKENLVIRQRFGLDGKGDRTLGEIA 479
Query: 394 GNLNISREMVRKHEVKALMKLKHPTRVDYLRQYV 293
NLNISREMVRKHEVKALMKLKH R+DYLR+YV
Sbjct: 480 SNLNISREMVRKHEVKALMKLKHSARLDYLRRYV 513