BLASTX nr result
ID: Lithospermum22_contig00011621
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00011621
(1281 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002530895.1| dead box ATP-dependent RNA helicase, putativ... 285 2e-74
emb|CBI40225.3| unnamed protein product [Vitis vinifera] 280 6e-73
ref|XP_002268926.1| PREDICTED: uncharacterized protein LOC100260... 273 7e-71
ref|XP_004138675.1| PREDICTED: pre-mRNA-processing ATP-dependent... 263 7e-68
ref|XP_003590262.1| DEAD-box ATP-dependent RNA helicase [Medicag... 255 2e-65
>ref|XP_002530895.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223529548|gb|EEF31501.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 493
Score = 285 bits (728), Expect = 2e-74
Identities = 143/300 (47%), Positives = 200/300 (66%)
Frame = -2
Query: 1160 ENTNKVSQRVXXXXXXXXXXXXXXXRLCQGMCYSLPTIEDPFNEKLGKVDFVKKSKKPAS 981
EN++ VS RV R+CQGMC+SLPT++DPFNE+ G++D K KK
Sbjct: 23 ENSSNVSARVASIIAAKKRRLSGKRRMCQGMCFSLPTLDDPFNERHGRMDINVKDKKKKV 82
Query: 980 SKREKMKNKNSVKSLKQVEQMTMAGLGTGKTRNGTDIKSHLYCPSKFLIACLDRVQKALQ 801
+ REK++ + L EQ G PSKF I CL+ ++KAL+
Sbjct: 83 NTREKVQLNGN--DLNHQEQACDYSDG----------------PSKFFILCLNAIEKALR 124
Query: 800 QDGTLKAEEKPFFVHPWGIDFWKAYSIGEDVIETSCAEARVEEIAWIAATCTDTIAREEK 621
DGT EEKP V+PWG++F K SIG+D++ETS + +E+IAWI + D IAR+EK
Sbjct: 125 HDGTYNDEEKPLLVNPWGLEFLKFCSIGKDILETSGSSCTIEQIAWIVSIAADAIARKEK 184
Query: 620 EGQSFAGPFLVFIVPSQERASEVHQICKSLKDCGIRTVSLHSGASIDHQIHGLKSCEPEF 441
EG SF+ PFL+F+VPSQE+A++V +CK LKD G+ TVSLH+GAS+DHQI GLKSCEPEF
Sbjct: 185 EGLSFSSPFLLFLVPSQEKAAKVRMVCKPLKDLGVHTVSLHAGASLDHQIRGLKSCEPEF 244
Query: 440 VISTPERLLELVSLNAIDITGISMLVIENPEAISEGGYVNAIESIKNSIPASSHKVVFSD 261
++STPERL+EL+SL AIDITG+S LV++ +++ + G + +++SI+ SI + H V F++
Sbjct: 245 LVSTPERLMELISLKAIDITGVSFLVVDGLDSLYQDGSLGSLKSIRQSISGNPHTVAFNN 304
>emb|CBI40225.3| unnamed protein product [Vitis vinifera]
Length = 370
Score = 280 bits (716), Expect = 6e-73
Identities = 155/336 (46%), Positives = 219/336 (65%), Gaps = 10/336 (2%)
Frame = -2
Query: 1166 QEENTNKVSQRVXXXXXXXXXXXXXXXRLCQGMCYSLPTIEDPFNEKLGKVDFVK-KSKK 990
++ +++ VS RV R+C+GMC+SLPT EDPFNE+ K D + K+KK
Sbjct: 22 KDSSSSAVSARVAAIIASKKRRKSGKRRICEGMCFSLPTPEDPFNERHEKKDSKRQKTKK 81
Query: 989 PASSKREKMKNKNSVKSLKQVEQMTMAGL-----GTGKTRNGTDIKS--HLYCPSKFLIA 831
S+++ + N + + T+ G G G+ +G +S + CPSKFLI
Sbjct: 82 LVPSRQDGGLSSNGTNTA--LTNGTLDGNHIPLPGKGRIVHGQQQQSCENSDCPSKFLIL 139
Query: 830 CLDRVQKALQQDGTLK-AEEKPFFVHPWGIDFWKAYSIGEDVIETSCAEARVEEIAWIAA 654
CL +Q ALQQD E+KP FV+ WG++FWK YS G +++ETS A + +E+IAW+ +
Sbjct: 140 CLKSIQSALQQDVIFNFKEDKPLFVNEWGVEFWKCYSSGINILETSGACSTLEQIAWMIS 199
Query: 653 TCTDTIAREEKEGQSFAGPFLVFIVPSQERASEVHQICKSLKDCGIRTVSLHSGASIDHQ 474
T DTIAR+EKEG PFL+F+VPSQE+A++V +CK LK GI TVSLH GAS+DHQ
Sbjct: 200 TAADTIARKEKEGLFLTSPFLLFLVPSQEKAAKVRAVCKPLKALGIHTVSLHPGASLDHQ 259
Query: 473 IHGLKSCEPEFVISTPERLLELVSLNAIDITGISMLVIENPEAISEGGYVNAIESIKNSI 294
IHGLKSCEPEF+++TPERLLEL+SL AIDI+G+S+LV++ + + +GGY++ I+SI+ SI
Sbjct: 260 IHGLKSCEPEFLVATPERLLELISLKAIDISGVSLLVVDGLDTLCKGGYLDMIKSIRQSI 319
Query: 293 PASSHKVVFSDSQ*VYKQSGLK-LLRRARAVAKLKG 189
+ H VVFS+ G++ LLR + LKG
Sbjct: 320 SGNPHAVVFSERSSCTSVPGVEDLLRGSYCRLPLKG 355
>ref|XP_002268926.1| PREDICTED: uncharacterized protein LOC100260841 isoform 2 [Vitis
vinifera]
Length = 407
Score = 273 bits (698), Expect = 7e-71
Identities = 156/371 (42%), Positives = 223/371 (60%), Gaps = 45/371 (12%)
Frame = -2
Query: 1166 QEENTNKVSQRVXXXXXXXXXXXXXXXRLCQGMCYSLPTIEDPFNEKLGKVDFVK-KSKK 990
++ +++ VS RV R+C+GMC+SLPT EDPFNE+ K D + K+KK
Sbjct: 22 KDSSSSAVSARVAAIIASKKRRKSGKRRICEGMCFSLPTPEDPFNERHEKKDSKRQKTKK 81
Query: 989 PASSKRE-------------------------KMKNKNSVKSLKQVEQMTMAGL------ 903
S+++ + K VK++K ++ + +
Sbjct: 82 LVPSRQDGGLSSNGTNTALTNGTLDGNHVNVDHQELKRHVKNIKNEQKEVLPSIDNVGGK 141
Query: 902 ---------GTGKTRNGTDIKS--HLYCPSKFLIACLDRVQKALQQDGTLK-AEEKPFFV 759
G G+ +G +S + CPSKFLI CL +Q ALQQD E+KP FV
Sbjct: 142 SEKGKIPLPGKGRIVHGQQQQSCENSDCPSKFLILCLKSIQSALQQDVIFNFKEDKPLFV 201
Query: 758 HPWGIDFWKAYSIGEDVIETSCAEARVEEIAWIAATCTDTIAREEKEGQSFAGPFLVFIV 579
+ WG++FWK YS G +++ETS A + +E+IAW+ +T DTIAR+EKEG PFL+F+V
Sbjct: 202 NEWGVEFWKCYSSGINILETSGACSTLEQIAWMISTAADTIARKEKEGLFLTSPFLLFLV 261
Query: 578 PSQERASEVHQICKSLKDCGIRTVSLHSGASIDHQIHGLKSCEPEFVISTPERLLELVSL 399
PSQE+A++V +CK LK GI TVSLH GAS+DHQIHGLKSCEPEF+++TPERLLEL+SL
Sbjct: 262 PSQEKAAKVRAVCKPLKALGIHTVSLHPGASLDHQIHGLKSCEPEFLVATPERLLELISL 321
Query: 398 NAIDITGISMLVIENPEAISEGGYVNAIESIKNSIPASSHKVVFSDSQ*VYKQSGLK-LL 222
AIDI+G+S+LV++ + + +GGY++ I+SI+ SI + H VVFS+ G++ LL
Sbjct: 322 KAIDISGVSLLVVDGLDTLCKGGYLDMIKSIRQSISGNPHAVVFSERSSCTSVPGVEDLL 381
Query: 221 RRARAVAKLKG 189
R + LKG
Sbjct: 382 RGSYCRLPLKG 392
>ref|XP_004138675.1| PREDICTED: pre-mRNA-processing ATP-dependent RNA helicase prp5-like
[Cucumis sativus] gi|449517699|ref|XP_004165882.1|
PREDICTED: pre-mRNA-processing ATP-dependent RNA helicase
prp5-like [Cucumis sativus]
Length = 562
Score = 263 bits (672), Expect = 7e-68
Identities = 140/307 (45%), Positives = 199/307 (64%), Gaps = 33/307 (10%)
Frame = -2
Query: 1079 CQGMCYSLPTIEDPFNEKLGKVDFVKKSKKPASSKREKMKNKNSVK---SLKQV--EQMT 915
CQGMC+SLPT +DP+N++ GK D K K SSKRE K K++ +L+ V E
Sbjct: 52 CQGMCFSLPTPDDPYNDRNGKKD--TKVKPSKSSKREFPKEKSTSAPNGTLRDVCFENAR 109
Query: 914 MAGLGTGKT--------RNGTDIK--------------------SHLYCPSKFLIACLDR 819
+ G+G T R+ TD + PSKFLI CL
Sbjct: 110 SSKEGSGGTLPSGRVAKRSKTDPERTKEYGNAKGSVQGFQEEDSESSVAPSKFLILCLSA 169
Query: 818 VQKALQQDGTLKAEEKPFFVHPWGIDFWKAYSIGEDVIETSCAEARVEEIAWIAATCTDT 639
++ AL D ++K+ KP F WGI+FWK YS G+D+++TS + E+IAW+ ++ D+
Sbjct: 170 IENALYHD-SIKSINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADS 228
Query: 638 IAREEKEGQSFAGPFLVFIVPSQERASEVHQICKSLKDCGIRTVSLHSGASIDHQIHGLK 459
IAR+EKEG SF+ PFL+F+VP+QE+A+++ +CK LK G+ TVS+H GAS+ HQI GLK
Sbjct: 229 IARKEKEGSSFSSPFLLFLVPNQEKATQIRSMCKPLKALGVHTVSIHPGASLGHQIQGLK 288
Query: 458 SCEPEFVISTPERLLELVSLNAIDITGISMLVIENPEAISEGGYVNAIESIKNSIPASSH 279
SCEPEF++STPERLLELV++ AIDI+G+S+LV++ E++S GGY++ +SI+ SI + H
Sbjct: 289 SCEPEFLVSTPERLLELVAMQAIDISGVSLLVVDGLESLSRGGYLDMTQSIRKSISSKLH 348
Query: 278 KVVFSDS 258
+VFSDS
Sbjct: 349 TIVFSDS 355
>ref|XP_003590262.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355479310|gb|AES60513.1| DEAD-box ATP-dependent RNA
helicase [Medicago truncatula]
Length = 532
Score = 255 bits (651), Expect = 2e-65
Identities = 144/322 (44%), Positives = 199/322 (61%), Gaps = 19/322 (5%)
Frame = -2
Query: 1166 QEENTNKVSQRVXXXXXXXXXXXXXXXRLCQGMCYSLPTIEDPFNEKLGKVDFVKKS-KK 990
++ + N VS ++ R+C+GMC+SLP+++DPFN++ GK +F KK KK
Sbjct: 19 KQNSKNSVSAKIAAVIASKKRRKAGKRRICEGMCFSLPSLDDPFNDRQGKPEFKKKDPKK 78
Query: 989 PASSKREK---MKNKNSVKSLKQVEQMTMAGLGTGKTRNGTDIKSHLY------------ 855
SS++EK +K K SV K GT RNG + KS +
Sbjct: 79 KTSSQKEKTTPVKGK-SVPGEK----------GTAVGRNGANNKSEMVEVCCGEQHDNEV 127
Query: 854 --CPSKFLIACLDRVQKALQQDGTLK-AEEKPFFVHPWGIDFWKAYSIGEDVIETSCAEA 684
PSKF+ CL ++ AL+ D E FF++PWG++F K +S G+D+I+T A
Sbjct: 128 SDFPSKFVFWCLSAIENALRHDDAYTDGEGNSFFLNPWGLEFSKHFSTGKDLIDTGGTFA 187
Query: 683 RVEEIAWIAATCTDTIAREEKEGQSFAGPFLVFIVPSQERASEVHQICKSLKDCGIRTVS 504
E+IAW+ + D R+EK+G S PFL+F+VPS+++A +V +CK LK GI TVS
Sbjct: 188 TTEQIAWMVSAAADIFVRKEKQGLSLDTPFLLFLVPSEKKAGQVRTVCKPLKSVGIHTVS 247
Query: 503 LHSGASIDHQIHGLKSCEPEFVISTPERLLELVSLNAIDITGISMLVIENPEAISEGGYV 324
+H GAS+DHQI GLKSCEPEF+ISTPERLLELVSL AIDI+GISMLVI+ +AI + G+
Sbjct: 248 VHPGASLDHQIQGLKSCEPEFLISTPERLLELVSLKAIDISGISMLVIDGFDAICKAGHA 307
Query: 323 NAIESIKNSIPASSHKVVFSDS 258
+AI+SIK I + VVF+DS
Sbjct: 308 DAIKSIKKFISGNPSLVVFNDS 329