BLASTX nr result

ID: Lithospermum22_contig00011615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00011615
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521026.1| AP-1 complex subunit gamma-2, putative [Rici...   125   3e-27
ref|XP_002323533.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|XP_002309097.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|XP_002886637.1| clathrin binding protein [Arabidopsis lyrata...   123   2e-26
gb|AAD14483.1| Strong similarity to gb|AF061286 gamma-adaptin 1 ...   122   4e-26

>ref|XP_002521026.1| AP-1 complex subunit gamma-2, putative [Ricinus communis]
           gi|223539863|gb|EEF41443.1| AP-1 complex subunit
           gamma-2, putative [Ricinus communis]
          Length = 875

 Score =  125 bits (315), Expect = 3e-27
 Identities = 57/71 (80%), Positives = 63/71 (88%)
 Frame = +3

Query: 3   NFINATAVLLKEKHHGVLITGVQLCADLCKISAEALEYFRKKHTDGLVRVLKDVANSPYS 182
           NFIN  A LLKEKHHGVLITG+QLC DLCK+S EALEYFRKK TDGLVR L+DV NSPY+
Sbjct: 177 NFINPAAALLKEKHHGVLITGIQLCTDLCKVSPEALEYFRKKCTDGLVRTLRDVVNSPYA 236

Query: 183 PEYDVSGITDP 215
           PEYD++GITDP
Sbjct: 237 PEYDIAGITDP 247


>ref|XP_002323533.1| predicted protein [Populus trichocarpa] gi|222868163|gb|EEF05294.1|
           predicted protein [Populus trichocarpa]
          Length = 875

 Score =  124 bits (310), Expect = 1e-26
 Identities = 55/71 (77%), Positives = 61/71 (85%)
 Frame = +3

Query: 3   NFINATAVLLKEKHHGVLITGVQLCADLCKISAEALEYFRKKHTDGLVRVLKDVANSPYS 182
           NFIN  A LLKEKHHGVLITG+QLC DLCK+S EALE+ RKKHTDGLV+ LKD  NSPY+
Sbjct: 177 NFINPAAALLKEKHHGVLITGIQLCTDLCKVSPEALEFLRKKHTDGLVKTLKDAVNSPYT 236

Query: 183 PEYDVSGITDP 215
           PEYD+SGI DP
Sbjct: 237 PEYDISGIADP 247


>ref|XP_002309097.1| predicted protein [Populus trichocarpa] gi|222855073|gb|EEE92620.1|
           predicted protein [Populus trichocarpa]
          Length = 877

 Score =  124 bits (310), Expect = 1e-26
 Identities = 55/71 (77%), Positives = 62/71 (87%)
 Frame = +3

Query: 3   NFINATAVLLKEKHHGVLITGVQLCADLCKISAEALEYFRKKHTDGLVRVLKDVANSPYS 182
           NFIN  A LLKEKHHGVLITG+QLC DLCK+S EALE+ RKKHT+GLVR LKDV NSPY+
Sbjct: 177 NFINPAAALLKEKHHGVLITGIQLCTDLCKVSPEALEFLRKKHTEGLVRTLKDVVNSPYA 236

Query: 183 PEYDVSGITDP 215
           PEYD++GI DP
Sbjct: 237 PEYDIAGIADP 247


>ref|XP_002886637.1| clathrin binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297332478|gb|EFH62896.1| clathrin binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 862

 Score =  123 bits (308), Expect = 2e-26
 Identities = 55/71 (77%), Positives = 65/71 (91%)
 Frame = +3

Query: 3   NFINATAVLLKEKHHGVLITGVQLCADLCKISAEALEYFRKKHTDGLVRVLKDVANSPYS 182
           NFIN +A LLKEKHHGVLITGV LC ++CK+S+EALEYFRKK T+GLV+ L+D+ANSPYS
Sbjct: 177 NFINPSAALLKEKHHGVLITGVHLCTEICKVSSEALEYFRKKCTEGLVKTLRDIANSPYS 236

Query: 183 PEYDVSGITDP 215
           PEYDV+GITDP
Sbjct: 237 PEYDVAGITDP 247


>gb|AAD14483.1| Strong similarity to gb|AF061286 gamma-adaptin 1 from Arabidopsis
           thaliana. EST gb|H37393 comes from this gene
           [Arabidopsis thaliana]
          Length = 867

 Score =  122 bits (305), Expect = 4e-26
 Identities = 55/71 (77%), Positives = 64/71 (90%)
 Frame = +3

Query: 3   NFINATAVLLKEKHHGVLITGVQLCADLCKISAEALEYFRKKHTDGLVRVLKDVANSPYS 182
           NFIN  A LLKEKHHGVLITGV LC ++CK+S+EALEYFRKK T+GLV+ L+D+ANSPYS
Sbjct: 177 NFINPGAALLKEKHHGVLITGVHLCTEICKVSSEALEYFRKKCTEGLVKTLRDIANSPYS 236

Query: 183 PEYDVSGITDP 215
           PEYDV+GITDP
Sbjct: 237 PEYDVAGITDP 247


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