BLASTX nr result

ID: Lithospermum22_contig00011614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00011614
         (1248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170092.1| PREDICTED: putative GDP-L-fucose synthase 2-...   482   e-134
ref|XP_004144717.1| PREDICTED: putative GDP-L-fucose synthase 2-...   482   e-134
ref|XP_003625896.1| GDP-L-fucose synthase [Medicago truncatula] ...   482   e-134
ref|XP_002324515.1| predicted protein [Populus trichocarpa] gi|2...   476   e-132
ref|NP_564040.1| GDP-L-fucose synthase [Arabidopsis thaliana] gi...   474   e-131

>ref|XP_004170092.1| PREDICTED: putative GDP-L-fucose synthase 2-like [Cucumis sativus]
          Length = 325

 Score =  482 bits (1241), Expect = e-134
 Identities = 234/308 (75%), Positives = 265/308 (86%)
 Frame = -1

Query: 1116 KSTKIYVAGHRGLVGSAVLRHLTRLGYTNLLFRTHSELDLTDQSAVSTFFTTHKPDYVIL 937
            KS KI+VAGHRGLVGSA++R L +LG+TNL+ R+HSELDLT QS V +FF   KP +VIL
Sbjct: 18   KSAKIFVAGHRGLVGSAIVRKLQQLGFTNLILRSHSELDLTRQSDVESFFANEKPRFVIL 77

Query: 936  AAAKVGGIHANATYPADFXXXXXXXXXXXXTSSVSHNVKKLVFLGSSCIYPKFAPQPIPE 757
            AAAKVGGIHAN TYPADF             S+  + V+KL+FLGSSCIYPKFAPQPIPE
Sbjct: 78   AAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRYGVEKLLFLGSSCIYPKFAPQPIPE 137

Query: 756  SALLTGPLEPTNEWYAIAKISGIKMCEAYKIQNKFNAISLMPTNLYGPNDNFHPENSHVL 577
             ALLTGPLEPTNEWYA+AKI+GIKMC+AY+IQ K++AIS MPTNLYGPNDNFHPENSHVL
Sbjct: 138  DALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPTNLYGPNDNFHPENSHVL 197

Query: 576  PGLLRRFHEAKMKQDVKVVVWGSGSPLREFLHVDDLADAVVFCMEEYDGLEHVNVGSGKE 397
            P L+RRFHEAK+K   +VVVWGSGSPLREFLHVDDLADAVVF MEEY  L H+NVGSGKE
Sbjct: 198  PALMRRFHEAKVKGAKEVVVWGSGSPLREFLHVDDLADAVVFLMEEYSDLGHLNVGSGKE 257

Query: 396  VSIKELAELVKEVVGFEGEIVWDGTKPDGTPRKLMDSSKLAKMGWEAKTSLKDGLVETYK 217
            VSIKELAELVKEVVGFEG++VWD +KPDGTPRKLMDSSKLA++GW  K SLKDGLV+TYK
Sbjct: 258  VSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAELGWSPKISLKDGLVDTYK 317

Query: 216  WYVENVKQ 193
            WYV+NV+Q
Sbjct: 318  WYVQNVQQ 325


>ref|XP_004144717.1| PREDICTED: putative GDP-L-fucose synthase 2-like [Cucumis sativus]
          Length = 325

 Score =  482 bits (1241), Expect = e-134
 Identities = 234/308 (75%), Positives = 265/308 (86%)
 Frame = -1

Query: 1116 KSTKIYVAGHRGLVGSAVLRHLTRLGYTNLLFRTHSELDLTDQSAVSTFFTTHKPDYVIL 937
            KS KI+VAGHRGLVGSA++R L +LG+TNL+ R+HSELDLT QS V +FF   KP +VIL
Sbjct: 18   KSAKIFVAGHRGLVGSAIVRKLQQLGFTNLILRSHSELDLTRQSDVESFFANEKPRFVIL 77

Query: 936  AAAKVGGIHANATYPADFXXXXXXXXXXXXTSSVSHNVKKLVFLGSSCIYPKFAPQPIPE 757
            AAAKVGGIHAN TYPADF             S+  + V+KL+FLGSSCIYPKFAPQPIPE
Sbjct: 78   AAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRYGVEKLLFLGSSCIYPKFAPQPIPE 137

Query: 756  SALLTGPLEPTNEWYAIAKISGIKMCEAYKIQNKFNAISLMPTNLYGPNDNFHPENSHVL 577
             ALLTGPLEPTNEWYA+AKI+GIKMC+AY+IQ K++AIS MPTNLYGPNDNFHPENSHVL
Sbjct: 138  DALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPTNLYGPNDNFHPENSHVL 197

Query: 576  PGLLRRFHEAKMKQDVKVVVWGSGSPLREFLHVDDLADAVVFCMEEYDGLEHVNVGSGKE 397
            P L+RRFHEAK+K   +VVVWGSGSPLREFLHVDDLADAVVF MEEY  L H+NVGSGKE
Sbjct: 198  PALMRRFHEAKVKGAKEVVVWGSGSPLREFLHVDDLADAVVFLMEEYSDLGHLNVGSGKE 257

Query: 396  VSIKELAELVKEVVGFEGEIVWDGTKPDGTPRKLMDSSKLAKMGWEAKTSLKDGLVETYK 217
            VSIKELAELVKEVVGFEG++VWD +KPDGTPRKLMDSSKLA++GW  K SLKDGLV+TYK
Sbjct: 258  VSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAELGWNPKISLKDGLVDTYK 317

Query: 216  WYVENVKQ 193
            WYV+NV+Q
Sbjct: 318  WYVQNVQQ 325


>ref|XP_003625896.1| GDP-L-fucose synthase [Medicago truncatula]
            gi|355500911|gb|AES82114.1| GDP-L-fucose synthase
            [Medicago truncatula]
          Length = 320

 Score =  482 bits (1241), Expect = e-134
 Identities = 230/308 (74%), Positives = 266/308 (86%)
 Frame = -1

Query: 1116 KSTKIYVAGHRGLVGSAVLRHLTRLGYTNLLFRTHSELDLTDQSAVSTFFTTHKPDYVIL 937
            KS K++V+GHRGLVGSA++R LT+LG+TNL+ RTH+ELDLT QS V  FF + KP++VI+
Sbjct: 13   KSAKVFVSGHRGLVGSAIVRKLTQLGFTNLILRTHTELDLTRQSDVEAFFASTKPEFVIV 72

Query: 936  AAAKVGGIHANATYPADFXXXXXXXXXXXXTSSVSHNVKKLVFLGSSCIYPKFAPQPIPE 757
            AAAKVGGIHAN TYPADF             S+  +  KKL+FLGSSCIYPKFAPQPIPE
Sbjct: 73   AAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRNGAKKLLFLGSSCIYPKFAPQPIPE 132

Query: 756  SALLTGPLEPTNEWYAIAKISGIKMCEAYKIQNKFNAISLMPTNLYGPNDNFHPENSHVL 577
             ALLTGPLEPTNEWYAIAKI+GIKMC+AY+IQ+K++AIS MPTNLYGPNDNFHPENSHVL
Sbjct: 133  DALLTGPLEPTNEWYAIAKIAGIKMCQAYRIQHKWDAISGMPTNLYGPNDNFHPENSHVL 192

Query: 576  PGLLRRFHEAKMKQDVKVVVWGSGSPLREFLHVDDLADAVVFCMEEYDGLEHVNVGSGKE 397
            P L+RRFHEAK+    +VVVWG+GSPLREFLHVDDLADAVVF ME+Y G+EH+NVGSGKE
Sbjct: 193  PALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMEKYSGVEHLNVGSGKE 252

Query: 396  VSIKELAELVKEVVGFEGEIVWDGTKPDGTPRKLMDSSKLAKMGWEAKTSLKDGLVETYK 217
            V+IKELAE +KEVVGFEG++VWD TKPDGTPRKLMDSSKLA +GW  K SLKDGLV+TYK
Sbjct: 253  VTIKELAESMKEVVGFEGDLVWDSTKPDGTPRKLMDSSKLAALGWTPKVSLKDGLVDTYK 312

Query: 216  WYVENVKQ 193
            WY+ENVKQ
Sbjct: 313  WYLENVKQ 320


>ref|XP_002324515.1| predicted protein [Populus trichocarpa] gi|222865949|gb|EEF03080.1|
            predicted protein [Populus trichocarpa]
          Length = 323

 Score =  476 bits (1225), Expect = e-132
 Identities = 233/306 (76%), Positives = 258/306 (84%)
 Frame = -1

Query: 1116 KSTKIYVAGHRGLVGSAVLRHLTRLGYTNLLFRTHSELDLTDQSAVSTFFTTHKPDYVIL 937
            KS KI+VAGHRGLVGSA++R L   G TNL+ R+HSELDLT QS V +FF   KP YVIL
Sbjct: 15   KSAKIFVAGHRGLVGSAIVRKLQSHGLTNLVLRSHSELDLTRQSDVDSFFAAEKPQYVIL 74

Query: 936  AAAKVGGIHANATYPADFXXXXXXXXXXXXTSSVSHNVKKLVFLGSSCIYPKFAPQPIPE 757
            AAAKVGGIHAN TYPADF             SS  H VKKL+FLGSSCIYPK APQPIPE
Sbjct: 75   AAAKVGGIHANNTYPADFIAINLQIQTNVIDSSFRHGVKKLLFLGSSCIYPKLAPQPIPE 134

Query: 756  SALLTGPLEPTNEWYAIAKISGIKMCEAYKIQNKFNAISLMPTNLYGPNDNFHPENSHVL 577
            +ALLTGPLEPTNEWYAIAKISGIKMC+AY+IQ  ++AIS MPTNLYGPNDNFHPENSHVL
Sbjct: 135  NALLTGPLEPTNEWYAIAKISGIKMCQAYRIQYNWDAISGMPTNLYGPNDNFHPENSHVL 194

Query: 576  PGLLRRFHEAKMKQDVKVVVWGSGSPLREFLHVDDLADAVVFCMEEYDGLEHVNVGSGKE 397
            P L+RRFHEAK+ +  +VVVWG+GSPLREFLHVDDLADAVVF M++Y GLEH+NVGSGKE
Sbjct: 195  PALMRRFHEAKVNKAKEVVVWGTGSPLREFLHVDDLADAVVFLMDKYSGLEHLNVGSGKE 254

Query: 396  VSIKELAELVKEVVGFEGEIVWDGTKPDGTPRKLMDSSKLAKMGWEAKTSLKDGLVETYK 217
            V+IKELAELVKE VGFEGE+VWD +KPDGTPRKLMDSSKL  +GW  K SLKDGLV+TYK
Sbjct: 255  VTIKELAELVKEAVGFEGELVWDTSKPDGTPRKLMDSSKLLGLGWMPKISLKDGLVDTYK 314

Query: 216  WYVENV 199
            WYVENV
Sbjct: 315  WYVENV 320


>ref|NP_564040.1| GDP-L-fucose synthase [Arabidopsis thaliana]
            gi|75174832|sp|Q9LMU0.1|FCL2_ARATH RecName: Full=Putative
            GDP-L-fucose synthase 2; AltName:
            Full=GDP-4-keto-6-deoxy-D-mannose-3,
            5-epimerase-4-reductase 2; Short=AtGER2
            gi|9665067|gb|AAF97269.1|AC034106_12 Strong similarity to
            GER1 from Arabidopsis thaliana gb|AF045286. ESTs
            gb|AI996642, gb|AV533951 come from this gene [Arabidopsis
            thaliana] gi|17380848|gb|AAL36236.1| putative
            GDP-L-fucose synthetase [Arabidopsis thaliana]
            gi|20465283|gb|AAM20005.1| putative GDP-L-fucose
            synthetase [Arabidopsis thaliana]
            gi|332191529|gb|AEE29650.1| GDP-L-fucose synthase
            [Arabidopsis thaliana]
          Length = 328

 Score =  474 bits (1221), Expect = e-131
 Identities = 231/308 (75%), Positives = 260/308 (84%)
 Frame = -1

Query: 1116 KSTKIYVAGHRGLVGSAVLRHLTRLGYTNLLFRTHSELDLTDQSAVSTFFTTHKPDYVIL 937
            KS KI+VAGHRGLVGSA++R L   G+TNL+ RTHSELDLT QS V +FF T KP YVIL
Sbjct: 18   KSAKIFVAGHRGLVGSAIVRKLQDQGFTNLVLRTHSELDLTSQSDVESFFATEKPVYVIL 77

Query: 936  AAAKVGGIHANATYPADFXXXXXXXXXXXXTSSVSHNVKKLVFLGSSCIYPKFAPQPIPE 757
            AAAKVGGIHAN TYPADF             S+ +H VKKL+FLGSSCIYPKFAPQPIPE
Sbjct: 78   AAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYTHGVKKLLFLGSSCIYPKFAPQPIPE 137

Query: 756  SALLTGPLEPTNEWYAIAKISGIKMCEAYKIQNKFNAISLMPTNLYGPNDNFHPENSHVL 577
            SALLTGPLEPTNEWYAIAKI+GIKMC+AY++Q++++AIS MPTNLYG NDNFHPENSHVL
Sbjct: 138  SALLTGPLEPTNEWYAIAKIAGIKMCQAYRLQHQWDAISGMPTNLYGQNDNFHPENSHVL 197

Query: 576  PGLLRRFHEAKMKQDVKVVVWGSGSPLREFLHVDDLADAVVFCMEEYDGLEHVNVGSGKE 397
            P L+RRFHEAK     +VVVWGSGSPLREFLHVDDLADA VF M++Y G EHVNVGSG E
Sbjct: 198  PALMRRFHEAKANNADEVVVWGSGSPLREFLHVDDLADACVFLMDQYSGFEHVNVGSGVE 257

Query: 396  VSIKELAELVKEVVGFEGEIVWDGTKPDGTPRKLMDSSKLAKMGWEAKTSLKDGLVETYK 217
            V+IKELAELVKEVVGF+G++VWD TKPDGTPRKLMDSSKLA +GW  K SLKDGL +TY+
Sbjct: 258  VTIKELAELVKEVVGFKGKLVWDTTKPDGTPRKLMDSSKLASLGWTPKISLKDGLSQTYE 317

Query: 216  WYVENVKQ 193
            WY+ENV Q
Sbjct: 318  WYLENVVQ 325


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