BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00011552
         (1568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313317.1| predicted protein [Populus trichocarpa] gi|2...   602   e-169
emb|CBI24939.3| unnamed protein product [Vitis vinifera]              599   e-169
ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containi...   598   e-168
ref|XP_002517779.1| pentatricopeptide repeat-containing protein,...   578   e-162
ref|XP_003544432.1| PREDICTED: pentatricopeptide repeat-containi...   563   e-158

>ref|XP_002313317.1| predicted protein [Populus trichocarpa] gi|222849725|gb|EEE87272.1|
            predicted protein [Populus trichocarpa]
          Length = 474

 Score =  602 bits (1551), Expect = e-169
 Identities = 293/434 (67%), Positives = 357/434 (82%), Gaps = 4/434 (0%)
 Frame = -2

Query: 1507 PNKLTTNSSKGSQQSNET----KSKKELSRILRTEAAIRAIEKKATSNKYNNLLPKAVLE 1340
            P  LT  SSK       T    +SKKELSRILRTEAAI+AIE+KA S KYNNL PKAVLE
Sbjct: 25   PQFLTIQSSKWCPDPTSTGLQRQSKKELSRILRTEAAIKAIEQKANSKKYNNLWPKAVLE 84

Query: 1339 ALNHAIQQNNWESALKIFGLLRKQYWYEPRTQTYTKLLVMLGKCRQPSQADFLFEIMKAD 1160
            AL+ AI++N WESALKIF LLRKQ+WYEPRT+TYTKLL+MLGKCRQP +  FLFE+M +D
Sbjct: 85   ALDDAIKENQWESALKIFELLRKQHWYEPRTKTYTKLLMMLGKCRQPEEGSFLFEVMLSD 144

Query: 1159 GLKPTIDVYTALVSAYGLSGLLDKAFQIVHEMKDVYNCKPDVHTFSILIKCCTKHLRFDL 980
            GLKPTIDVYTALVSAYG SG LDKAF IV EMK +  CKPDV+T+SILI CC K  RF+L
Sbjct: 145  GLKPTIDVYTALVSAYGKSGQLDKAFSIVVEMKAISECKPDVYTYSILINCCIKLHRFEL 204

Query: 979  TKHILSEMSDLGVDCNTVTYNTIIDGYGKSKLFDLMEASLTYMIEIGTCAPDIFTFNSVV 800
             + IL+EMS LG++C+TVTYNTIIDGYGK+K+F+ ME +LT MIE G+  PD+FTFNS++
Sbjct: 205  IRGILAEMSYLGIECSTVTYNTIIDGYGKAKMFEEMENTLTDMIESGSSVPDLFTFNSII 264

Query: 799  GAYGKVGQIDKMEKWFDEFQIMGISPDVLTFNILIRSYGKLGMYEKMRSVIAFMSKRFYA 620
            GAYG  G+IDKMEKW+ EFQ+MG+  D+ TFNILIRSYGK GMY KMRSV+ FM KRF++
Sbjct: 265  GAYGSKGRIDKMEKWYTEFQLMGLRQDIKTFNILIRSYGKAGMYGKMRSVLEFMEKRFFS 324

Query: 619  PTVVTYNIIIETYGKAGQIEKMEDVFLEMKHKGMKPNTITYTSLADAYGKAGLVDKIDSL 440
            P++VT+NI IET+GKAG IE ME+ F +MKH G+KPNT+TY SL  AY KAG + K+DS+
Sbjct: 325  PSIVTHNIFIETFGKAGDIETMEEYFSKMKHLGIKPNTVTYCSLVSAYSKAGHIMKVDSI 384

Query: 439  MRQIANNDVVLDTPFFNCVISAYGSAGDMEKMVEAYLAMKDRNCRANNTTFASMIQAYNA 260
            +RQ+ N+DV+LDTPFFNCVISAYG AGD+EKM E +L M+ R C+ ++ TFA+MIQAYNA
Sbjct: 385  LRQVENSDVILDTPFFNCVISAYGRAGDIEKMSELFLGMEGRKCKPDSITFATMIQAYNA 444

Query: 259  QGMVKAAQDLENLI 218
            QGM++AAQ +EN++
Sbjct: 445  QGMIEAAQGMENMM 458


>emb|CBI24939.3| unnamed protein product [Vitis vinifera]
          Length = 485

 Score =  599 bits (1544), Expect = e-169
 Identities = 292/434 (67%), Positives = 359/434 (82%), Gaps = 1/434 (0%)
 Frame = -2

Query: 1486 SSKGSQQSNETKSKKELSRILRTEAAIRAIEKKATSNKYNNLLPKAVLEALNHAIQQNNW 1307
            SS  SQ   + + KK+LSRILRTEAAI  IE+KA S KY+ L PKAVLEAL+ AI++N +
Sbjct: 49   SSGSSQNGLQRQPKKDLSRILRTEAAISGIERKANSRKYSTLWPKAVLEALDEAIRENRY 108

Query: 1306 ESALKIFGLLRKQYWYEPRTQTYTKLLVMLGKCRQPSQADFLFEIMKADGLKPTIDVYTA 1127
            ESALKIFGLLRKQ+WYEPR QTYTKLL+MLGKC+QP QA  LFE+M ++GL+PT+DVYTA
Sbjct: 109  ESALKIFGLLRKQHWYEPRCQTYTKLLMMLGKCKQPEQASLLFEVMLSEGLRPTLDVYTA 168

Query: 1126 LVSAYGLSGLLDKAFQIVHEMKDVYNCKPDVHTFSILIKCCTKHLRFDLTKHILSEMSDL 947
            LVSAYG SG LDKAF  V +MK V +CKPDV+T+SILIKCCT   RFDL + I +EMS L
Sbjct: 169  LVSAYGHSGQLDKAFCTVEDMKSVSDCKPDVYTYSILIKCCTTLGRFDLIERIFTEMSYL 228

Query: 946  GVDCNTVTYNTIIDGYGKSKLFDLMEASLTYMIEIGTCAPDIFTFNSVVGAYGKVGQIDK 767
            G++C+TVTYNTIIDGYGK+ +F+LME+SLT MIE GTC PDIFT NS + AYG  GQI+K
Sbjct: 229  GIECSTVTYNTIIDGYGKADMFELMESSLTEMIESGTCLPDIFTLNSFIWAYGNSGQIEK 288

Query: 766  MEKWFDEFQIMGISPDVLTFNILIRSYGKLGMYEKMRSVIAFMSKRFYAPTVVTYNIIIE 587
            MEKW+DEFQ+MGI PD+ TFNILIRSYGK  MYEKM SV+ FM KRFY+PT+VT+NI+IE
Sbjct: 289  MEKWYDEFQLMGIRPDIKTFNILIRSYGKACMYEKMVSVMEFMKKRFYSPTIVTFNIVIE 348

Query: 586  TYGKAGQIEKMEDVFLEMKHKGMKPNTITYTSLADAYGKAGLVDKIDSLMRQIANNDVVL 407
             +G+ G IEKME+ FL+MKH+G+KPN+ITY SL  AY KAG + K+DS++RQI N+DV L
Sbjct: 349  MFGRVGNIEKMEEFFLKMKHQGVKPNSITYCSLVSAYSKAGYLKKVDSILRQIENSDVTL 408

Query: 406  DTPFFNCVISAYGSAGDMEKMVEAYLAMKDRNCRANNTTFASMIQAYNAQGMVKAAQDLE 227
            DTPFFNCV+SAYG AGD+E+M E +L MK+R C+ +N TFA+MIQAYNAQGM++AAQ+LE
Sbjct: 409  DTPFFNCVLSAYGQAGDVERMGELFLVMKERKCKPDNITFATMIQAYNAQGMIEAAQNLE 468

Query: 226  -NLI*LKSQEVLKL 188
             N+I  K++   +L
Sbjct: 469  VNMITTKNKSGTRL 482


>ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containing protein At3g53170-like
            [Vitis vinifera]
          Length = 538

 Score =  598 bits (1542), Expect = e-168
 Identities = 291/429 (67%), Positives = 357/429 (83%), Gaps = 1/429 (0%)
 Frame = -2

Query: 1486 SSKGSQQSNETKSKKELSRILRTEAAIRAIEKKATSNKYNNLLPKAVLEALNHAIQQNNW 1307
            SS  SQ   + + KK+LSRILRTEAAI  IE+KA S KY+ L PKAVLEAL+ AI++N +
Sbjct: 49   SSGSSQNGLQRQPKKDLSRILRTEAAISGIERKANSRKYSTLWPKAVLEALDEAIRENRY 108

Query: 1306 ESALKIFGLLRKQYWYEPRTQTYTKLLVMLGKCRQPSQADFLFEIMKADGLKPTIDVYTA 1127
            ESALKIFGLLRKQ+WYEPR QTYTKLL+MLGKC+QP QA  LFE+M ++GL+PT+DVYTA
Sbjct: 109  ESALKIFGLLRKQHWYEPRCQTYTKLLMMLGKCKQPEQASLLFEVMLSEGLRPTLDVYTA 168

Query: 1126 LVSAYGLSGLLDKAFQIVHEMKDVYNCKPDVHTFSILIKCCTKHLRFDLTKHILSEMSDL 947
            LVSAYG SG LDKAF  V +MK V +CKPDV+T+SILIKCCT   RFDL + I +EMS L
Sbjct: 169  LVSAYGHSGQLDKAFCTVEDMKSVSDCKPDVYTYSILIKCCTTLGRFDLIERIFTEMSYL 228

Query: 946  GVDCNTVTYNTIIDGYGKSKLFDLMEASLTYMIEIGTCAPDIFTFNSVVGAYGKVGQIDK 767
            G++C+TVTYNTIIDGYGK+ +F+LME+SLT MIE GTC PDIFT NS + AYG  GQI+K
Sbjct: 229  GIECSTVTYNTIIDGYGKADMFELMESSLTEMIESGTCLPDIFTLNSFIWAYGNSGQIEK 288

Query: 766  MEKWFDEFQIMGISPDVLTFNILIRSYGKLGMYEKMRSVIAFMSKRFYAPTVVTYNIIIE 587
            MEKW+DEFQ+MGI PD+ TFNILIRSYGK  MYEKM SV+ FM KRFY+PT+VT+NI+IE
Sbjct: 289  MEKWYDEFQLMGIRPDIKTFNILIRSYGKACMYEKMVSVMEFMKKRFYSPTIVTFNIVIE 348

Query: 586  TYGKAGQIEKMEDVFLEMKHKGMKPNTITYTSLADAYGKAGLVDKIDSLMRQIANNDVVL 407
             +G+ G IEKME+ FL+MKH+G+KPN+ITY SL  AY KAG + K+DS++RQI N+DV L
Sbjct: 349  MFGRVGNIEKMEEFFLKMKHQGVKPNSITYCSLVSAYSKAGYLKKVDSILRQIENSDVTL 408

Query: 406  DTPFFNCVISAYGSAGDMEKMVEAYLAMKDRNCRANNTTFASMIQAYNAQGMVKAAQDLE 227
            DTPFFNCV+SAYG AGD+E+M E +L MK+R C+ +N TFA+MIQAYNAQGM++AAQ+LE
Sbjct: 409  DTPFFNCVLSAYGQAGDVERMGELFLVMKERKCKPDNITFATMIQAYNAQGMIEAAQNLE 468

Query: 226  -NLI*LKSQ 203
             N+I  K++
Sbjct: 469  VNMITTKNK 477


>ref|XP_002517779.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223543051|gb|EEF44586.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 486

 Score =  578 bits (1491), Expect = e-162
 Identities = 281/411 (68%), Positives = 341/411 (82%)
 Frame = -2

Query: 1450 SKKELSRILRTEAAIRAIEKKATSNKYNNLLPKAVLEALNHAIQQNNWESALKIFGLLRK 1271
            +KKELSR LRT+AAI+AIE+KA S+KYN L PKAVLEAL+ AI++  W+SALKIF LLRK
Sbjct: 61   TKKELSRFLRTDAAIKAIEQKADSSKYNRLWPKAVLEALDDAIKERRWKSALKIFELLRK 120

Query: 1270 QYWYEPRTQTYTKLLVMLGKCRQPSQADFLFEIMKADGLKPTIDVYTALVSAYGLSGLLD 1091
            Q+WYEPR QTYTKLL+MLGKCRQP +A  LFE+M+ +GL+PTIDVYTALVSAYG SGLL 
Sbjct: 121  QHWYEPRCQTYTKLLMMLGKCRQPEEARLLFEVMQTEGLRPTIDVYTALVSAYGESGLLA 180

Query: 1090 KAFQIVHEMKDVYNCKPDVHTFSILIKCCTKHLRFDLTKHILSEMSDLGVDCNTVTYNTI 911
            KAF  V EMK V +CKPDV+T+S+LI  CTK  RFDL   ILSEMS LGV+C+TVT+NTI
Sbjct: 181  KAFSTVDEMKSVSDCKPDVYTYSVLINICTKLHRFDLIGRILSEMSYLGVECSTVTFNTI 240

Query: 910  IDGYGKSKLFDLMEASLTYMIEIGTCAPDIFTFNSVVGAYGKVGQIDKMEKWFDEFQIMG 731
            I+GYGK+K+F  ME SLT MIEIG   PD+FTFNSV+GAYG  G+I+KMEKW++EFQ+MG
Sbjct: 241  INGYGKAKMFREMENSLTNMIEIGNSVPDLFTFNSVIGAYGNSGRIEKMEKWYNEFQLMG 300

Query: 730  ISPDVLTFNILIRSYGKLGMYEKMRSVIAFMSKRFYAPTVVTYNIIIETYGKAGQIEKME 551
            ISPD+ TFNILI+SYGK GMYEK+ SVI FM KRF+ PTVVTYNIIIET+G+AG IE M+
Sbjct: 301  ISPDIKTFNILIKSYGKAGMYEKINSVIEFMKKRFFPPTVVTYNIIIETFGRAGDIENMD 360

Query: 550  DVFLEMKHKGMKPNTITYTSLADAYGKAGLVDKIDSLMRQIANNDVVLDTPFFNCVISAY 371
            + F  MKH GMKPN ITY SL  AY KAGL+ K++S++RQ+ N+DVVLDT FFNC+I+AY
Sbjct: 361  EYFKTMKHLGMKPNAITYCSLVSAYSKAGLLMKVNSILRQVENSDVVLDTTFFNCIINAY 420

Query: 370  GSAGDMEKMVEAYLAMKDRNCRANNTTFASMIQAYNAQGMVKAAQDLENLI 218
            G AGD++KM E +L M++R C  +N TFA+MIQAY  QGM +AAQ LE ++
Sbjct: 421  GQAGDVDKMAELFLEMRERECMPDNVTFATMIQAYRGQGMTEAAQALEKMM 471


>ref|XP_003544432.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53170-like
            [Glycine max]
          Length = 481

 Score =  563 bits (1450), Expect = e-158
 Identities = 273/454 (60%), Positives = 349/454 (76%), Gaps = 7/454 (1%)
 Frame = -2

Query: 1558 ANISSAS---STTIFDRPKLPNKLTTNSSKGSQQSNETK----SKKELSRILRTEAAIRA 1400
            ++ISSA+   S+T    PK        S K S +    +      K+LSRILRTEAAIR 
Sbjct: 14   SSISSATPFTSSTNRSPPKTRRGFRVESLKRSSKPASAELVKDPNKDLSRILRTEAAIRG 73

Query: 1399 IEKKATSNKYNNLLPKAVLEALNHAIQQNNWESALKIFGLLRKQYWYEPRTQTYTKLLVM 1220
            +  KA S+ +  L PKA+LE+L+ AI++    SAL+IF LLRKQYWY+PR +TY KLL+M
Sbjct: 74   VHNKAKSSSHKQLWPKALLESLDDAIKRCRSHSALEIFALLRKQYWYQPRCRTYAKLLMM 133

Query: 1219 LGKCRQPSQADFLFEIMKADGLKPTIDVYTALVSAYGLSGLLDKAFQIVHEMKDVYNCKP 1040
            LGKCRQP +A  LFEIM ++GLKPT+DVYTALVSAYG SGLLD+AF  V +MK V +C+P
Sbjct: 134  LGKCRQPEEASLLFEIMLSEGLKPTVDVYTALVSAYGQSGLLDQAFSTVEDMKSVVDCEP 193

Query: 1039 DVHTFSILIKCCTKHLRFDLTKHILSEMSDLGVDCNTVTYNTIIDGYGKSKLFDLMEASL 860
            DV+T+SILI+CC K  RFDL +H+L+EMS LG+ CN VTYN+IIDGYGK+ +F+ M+ +L
Sbjct: 194  DVYTYSILIRCCAKFRRFDLIEHVLAEMSYLGIKCNCVTYNSIIDGYGKASMFEQMDDAL 253

Query: 859  TYMIEIGTCAPDIFTFNSVVGAYGKVGQIDKMEKWFDEFQIMGISPDVLTFNILIRSYGK 680
              MIE G   PD+FT NS VGAYG  GQIDKMEKW+DEFQ+MGI PD+ TFN +I+SYGK
Sbjct: 254  NDMIENGNSHPDVFTLNSFVGAYGNAGQIDKMEKWYDEFQLMGIKPDITTFNTMIKSYGK 313

Query: 679  LGMYEKMRSVIAFMSKRFYAPTVVTYNIIIETYGKAGQIEKMEDVFLEMKHKGMKPNTIT 500
             GMYEKM++V+ FM KRF+ PT+VTYN +IE +GKAG+IEKM+  FL+MKH G+KPN+IT
Sbjct: 314  AGMYEKMKTVMDFMEKRFFTPTIVTYNTVIEVFGKAGEIEKMDQHFLKMKHLGVKPNSIT 373

Query: 499  YTSLADAYGKAGLVDKIDSLMRQIANNDVVLDTPFFNCVISAYGSAGDMEKMVEAYLAMK 320
            Y SL  AY K G +DK+DS+MR + N+DVVLDTPFFNC+ISAYG AG+++KM E +LAM+
Sbjct: 374  YCSLVSAYSKVGCIDKVDSIMRHVENSDVVLDTPFFNCIISAYGQAGNLKKMGELFLAMR 433

Query: 319  DRNCRANNTTFASMIQAYNAQGMVKAAQDLENLI 218
            +R C  +N TFA MIQ+YN QGM +A Q+LEN++
Sbjct: 434  ERKCEPDNITFACMIQSYNTQGMTEAVQNLENMM 467



 Score =  140 bits (353), Expect = 9e-31
 Identities = 74/291 (25%), Positives = 149/291 (51%)
 Frame = -2

Query: 1258 EPRTQTYTKLLVMLGKCRQPSQADFLFEIMKADGLKPTIDVYTALVSAYGLSGLLDKAFQ 1079
            EP   TY+ L+    K R+    + +   M   G+K     Y +++  YG + + ++   
Sbjct: 192  EPDVYTYSILIRCCAKFRRFDLIEHVLAEMSYLGIKCNCVTYNSIIDGYGKASMFEQMDD 251

Query: 1078 IVHEMKDVYNCKPDVHTFSILIKCCTKHLRFDLTKHILSEMSDLGVDCNTVTYNTIIDGY 899
             +++M +  N  PDV T +  +       + D  +    E   +G+  +  T+NT+I  Y
Sbjct: 252  ALNDMIENGNSHPDVFTLNSFVGAYGNAGQIDKMEKWYDEFQLMGIKPDITTFNTMIKSY 311

Query: 898  GKSKLFDLMEASLTYMIEIGTCAPDIFTFNSVVGAYGKVGQIDKMEKWFDEFQIMGISPD 719
            GK+ +++ M+  + +M E     P I T+N+V+  +GK G+I+KM++ F + + +G+ P+
Sbjct: 312  GKAGMYEKMKTVMDFM-EKRFFTPTIVTYNTVIEVFGKAGEIEKMDQHFLKMKHLGVKPN 370

Query: 718  VLTFNILIRSYGKLGMYEKMRSVIAFMSKRFYAPTVVTYNIIIETYGKAGQIEKMEDVFL 539
             +T+  L+ +Y K+G  +K+ S++  +           +N II  YG+AG ++KM ++FL
Sbjct: 371  SITYCSLVSAYSKVGCIDKVDSIMRHVENSDVVLDTPFFNCIISAYGQAGNLKKMGELFL 430

Query: 538  EMKHKGMKPNTITYTSLADAYGKAGLVDKIDSLMRQIANNDVVLDTPFFNC 386
             M+ +  +P+ IT+  +  +Y   G+ + + +L   + +    L T    C
Sbjct: 431  AMRERKCEPDNITFACMIQSYNTQGMTEAVQNLENMMISAKSSLGTKLIGC 481