BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00011477
         (1187 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161929.1| PREDICTED: tRNA pseudouridine synthase A-lik...   459   e-127
ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vi...   455   e-125
ref|XP_002331109.1| predicted protein [Populus trichocarpa] gi|2...   444   e-122
ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase A-lik...   443   e-122
gb|ABE79574.2| tRNA pseudouridine synthase [Medicago truncatula]      439   e-121

>ref|XP_004161929.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 352

 Score =  459 bits (1182), Expect = e-127
 Identities = 232/302 (76%), Positives = 261/302 (86%), Gaps = 7/302 (2%)
 Frame = +2

Query: 17  QRYLIAIEYIGTRFAGAQQQPPNFRTVVGVLQEAFRKFIGQPVSVFCSSRTDAGVHALSN 196
           QRYL+A+EYIGTRF G+QQQP N RTVVG L+EAF+KFIGQPVSVFCSSRTDAGVHALSN
Sbjct: 48  QRYLVAVEYIGTRFYGSQQQP-NCRTVVGALEEAFQKFIGQPVSVFCSSRTDAGVHALSN 106

Query: 197 VCHVDIERISKRKPGEVLPPHDPAVVKKAVNHFLQKTEGDITVIDVRSVPPNFHSRYQAQ 376
           VCHVD+ERISKRKPGEVLPPH+P VV KAVNHFLQK EGD+TV+DVRSVP +FH+RY+AQ
Sbjct: 107 VCHVDVERISKRKPGEVLPPHEPGVVHKAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQ 166

Query: 377 ERTYFYRLLSGPEALSTFEKGRAWHVPEELDILAMQEACKVLVGQHDFSSFRAAACQAKS 556
           ERTYFYRL+SGPEALS+FEK RAWHVPE L+I AMQEACKVLVG HDFSSFRAA CQA S
Sbjct: 167 ERTYFYRLVSGPEALSSFEKDRAWHVPETLNIGAMQEACKVLVGHHDFSSFRAAGCQANS 226

Query: 557 PIRTLEELSVIEVASTPYFPSHFERNQ-LGKDISGAQAAQE------FGMRIRHRCLVVT 715
           PIRTL+EL+V EVASTPYFP+  ER Q  GK+ S  +          FG+R RHRC VVT
Sbjct: 227 PIRTLDELNVCEVASTPYFPTSMERKQRQGKEESEIEVPCSETCEVGFGIRRRHRCFVVT 286

Query: 716 ARSRSFLYHQVRLLVGVLKSVGTRELTVPDVERILKAKTVTAASPMAPACGLYLGQVKYD 895
           AR+RSFLYHQVRL+VGVLK+VG+ +LTV DV RIL+AK V++A PMAPACGLYLG VKYD
Sbjct: 287 ARARSFLYHQVRLMVGVLKAVGSGDLTVGDVGRILEAKNVSSARPMAPACGLYLGHVKYD 346

Query: 896 LP 901
           LP
Sbjct: 347 LP 348


>ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vitis vinifera]
            gi|297739525|emb|CBI29707.3| unnamed protein product
            [Vitis vinifera]
          Length = 380

 Score =  455 bits (1170), Expect = e-125
 Identities = 234/324 (72%), Positives = 261/324 (80%), Gaps = 25/324 (7%)
 Frame = +2

Query: 5    NSKSQRYLIAIEYIGTRFAGAQQQPPNFRTVVGVLQEAFRKFIGQPVSVFCSSRTDAGVH 184
            N + QRYL+A+EYIGTRF+G+QQQ  N RTV G LQEAF KFIGQPVS+FCSSRTDAGVH
Sbjct: 58   NPRVQRYLVAVEYIGTRFSGSQQQL-NCRTVAGALQEAFHKFIGQPVSIFCSSRTDAGVH 116

Query: 185  ALSNVCHVDIERISKRKPGEVLPPHDPAVVKKAVNHFLQKTEGDITVIDVRSVPPNFHSR 364
            ALSNVCHVD+ERISKRKPGEVLPPH+PAVV++AVNHFLQK EGD+ VIDVR VPP+FH+R
Sbjct: 117  ALSNVCHVDVERISKRKPGEVLPPHEPAVVRRAVNHFLQKNEGDVMVIDVRCVPPDFHAR 176

Query: 365  YQAQERTYFYRLLSGPEALSTFEKGRAWHVPEELDILAMQEACKVLVGQHDFSSFRAAAC 544
            Y+A+ERTYFYRLLSGPE LS+FEK RAWHVPE+LD+LAMQ+AC+VLVG HDFSSFRAA C
Sbjct: 177  YKARERTYFYRLLSGPEPLSSFEKDRAWHVPEDLDLLAMQKACRVLVGCHDFSSFRAAGC 236

Query: 545  QAKSPIRTLEELSVIEVASTPYFPSHFERNQ----------------LGKDISGAQ---- 664
            QAKSPIRTL+EL V EV  TPYFPS  ER Q                +    S A     
Sbjct: 237  QAKSPIRTLDELCVSEVLPTPYFPSITERAQNNFTEENPLACSNNAEVPDSPSTANHDRL 296

Query: 665  -----AAQEFGMRIRHRCLVVTARSRSFLYHQVRLLVGVLKSVGTRELTVPDVERILKAK 829
                 A Q FG+R RHRC +VTAR+RSFLYHQVRLLVGV+K VGT +LTV DVERIL AK
Sbjct: 297  DGFNGAGQGFGVRRRHRCFLVTARARSFLYHQVRLLVGVIKCVGTGDLTVSDVERILNAK 356

Query: 830  TVTAASPMAPACGLYLGQVKYDLP 901
            TVTAASPMAPACGLYLG V YDLP
Sbjct: 357  TVTAASPMAPACGLYLGNVNYDLP 380


>ref|XP_002331109.1| predicted protein [Populus trichocarpa] gi|222872837|gb|EEF09968.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score =  444 bits (1141), Expect = e-122
 Identities = 228/320 (71%), Positives = 254/320 (79%), Gaps = 27/320 (8%)
 Frame = +2

Query: 17  QRYLIAIEYIGTRFAGAQQQPPNFRTVVGVLQEAFRKFIGQPVSVFCSSRTDAGVHALSN 196
           QRYL+A+EYIGTRF G+QQQ  N RTVVGVLQEAF KFIGQPV++  SSRTDAGVHALSN
Sbjct: 6   QRYLVAVEYIGTRFCGSQQQL-NHRTVVGVLQEAFHKFIGQPVTICLSSRTDAGVHALSN 64

Query: 197 VCHVDIERISKRKPGEVLPPHDPAVVKKAVNHFLQKTEGDITVIDVRSVPPNFHSRYQAQ 376
           VCHVD+ERISKRKPGEVLPPH+PAVV+KAVNHFLQK EGDI V DVRSV  +FH+R++AQ
Sbjct: 65  VCHVDVERISKRKPGEVLPPHEPAVVRKAVNHFLQKKEGDIMVTDVRSVSAHFHARFKAQ 124

Query: 377 ERTYFYRLLSGPEALSTFEKGRAWHVPEELDILAMQEACKVLVGQHDFSSFRAAACQAKS 556
           ERTYFYRLL GPE LSTFEK RAWHV EELD+++MQEACKVLVG HDFSSFRA+ CQAKS
Sbjct: 125 ERTYFYRLLIGPELLSTFEKDRAWHVSEELDLVSMQEACKVLVGHHDFSSFRASGCQAKS 184

Query: 557 PIRTLEELSVIEVASTPYFPSHFERNQLGKDISGAQAAQE-------------------- 676
           P RTLEELSV+EV STPYFPS  ER Q   +  G  +                       
Sbjct: 185 PFRTLEELSVLEVVSTPYFPSITEREQNSSNGEGPHSFHNKCKTGLPTGSISNGFMAGGS 244

Query: 677 -------FGMRIRHRCLVVTARSRSFLYHQVRLLVGVLKSVGTRELTVPDVERILKAKTV 835
                  FG+R RHRC V+TARSRSFLYHQVRLLVGVLKSVGT +LTV DVERIL A+++
Sbjct: 245 NSGTDLGFGIRRRHRCYVITARSRSFLYHQVRLLVGVLKSVGTGDLTVSDVERILNARSI 304

Query: 836 TAASPMAPACGLYLGQVKYD 895
           TAASPMAPACGLYLG VKY+
Sbjct: 305 TAASPMAPACGLYLGHVKYE 324


>ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase A-like [Glycine max]
          Length = 369

 Score =  443 bits (1140), Expect = e-122
 Identities = 230/321 (71%), Positives = 258/321 (80%), Gaps = 26/321 (8%)
 Frame = +2

Query: 17   QRYLIAIEYIGTRFAGAQQQPPNFRTVVGVLQEAFRKFIGQPVSVFCSSRTDAGVHALSN 196
            QRYL+AIEYIGT F+G+Q+Q  N RTVVG L+EAF KF+GQPVSV CSSRTDAGVHALSN
Sbjct: 49   QRYLVAIEYIGTLFSGSQKQL-NVRTVVGALEEAFSKFVGQPVSVSCSSRTDAGVHALSN 107

Query: 197  VCHVDIERISKRKPGEVLPPHDPAVVKKAVNHFLQKTEGDITVIDVRSVPPNFHSRYQAQ 376
            VCHVDI+RISKR+PGEVLPPH+PAVV +AVNHFLQK + D+ VIDVR VP +FH+R++AQ
Sbjct: 108  VCHVDIQRISKRRPGEVLPPHEPAVVGRAVNHFLQKHDSDLMVIDVRCVPSDFHARFKAQ 167

Query: 377  ERTYFYRLLSGPEALSTFEKGRAWHVPEELDILAMQEACKVLVGQHDFSSFRAAACQAKS 556
            ERTYFYRLLSGPE LSTFEK RAWHVPEEL + AMQEAC+VLVG HDFSSFRAA CQAKS
Sbjct: 168  ERTYFYRLLSGPEPLSTFEKDRAWHVPEELSLPAMQEACRVLVGCHDFSSFRAAGCQAKS 227

Query: 557  PIRTLEELSVIEVASTPYFPSHFERNQ--------------------------LGKDISG 658
            PIRTL+ELSV EV  +PYFPS  +R Q                          + K I+ 
Sbjct: 228  PIRTLDELSVNEVIESPYFPSLMDREQHNKVSGDLRSCSNNTETDIPPISNPSIDKVITS 287

Query: 659  AQAAQEFGMRIRHRCLVVTARSRSFLYHQVRLLVGVLKSVGTRELTVPDVERILKAKTVT 838
            +Q A  FG R RHRCLVVTAR+RSFLYHQVRLLVGVLK+ GT  LT+PDVERIL AKTVT
Sbjct: 288  SQDA-GFGKRRRHRCLVVTARARSFLYHQVRLLVGVLKAAGTGNLTIPDVERILNAKTVT 346

Query: 839  AASPMAPACGLYLGQVKYDLP 901
            AASPMAPACGLYLG+VKYDLP
Sbjct: 347  AASPMAPACGLYLGEVKYDLP 367


>gb|ABE79574.2| tRNA pseudouridine synthase [Medicago truncatula]
          Length = 361

 Score =  439 bits (1129), Expect = e-121
 Identities = 225/322 (69%), Positives = 256/322 (79%), Gaps = 25/322 (7%)
 Frame = +2

Query: 11   KSQRYLIAIEYIGTRFAGAQQQPPNFRTVVGVLQEAFRKFIGQPVSVFCSSRTDAGVHAL 190
            K QRYL+A+EYIGTRF G Q+Q  + RTV GVL++AF KF+GQPVSV CSSRTDAGVHAL
Sbjct: 40   KIQRYLVAVEYIGTRFFGFQKQLTD-RTVAGVLEDAFCKFVGQPVSVVCSSRTDAGVHAL 98

Query: 191  SNVCHVDIERISKRKPGEVLPPHDPAVVKKAVNHFLQKTEGDITVIDVRSVPPNFHSRYQ 370
            SNVCHVDIERISKRKPGEVL PH+PAVV++AVNHFLQK  GD+ VIDVR VP +FH+RY+
Sbjct: 99   SNVCHVDIERISKRKPGEVLQPHEPAVVRRAVNHFLQKENGDLAVIDVRCVPSDFHARYK 158

Query: 371  AQERTYFYRLLSGPEALSTFEKGRAWHVPEELDILAMQEACKVLVGQHDFSSFRAAACQA 550
            AQERTYFYRLLSGPE LSTFEK RAWH+PEEL++ AMQEACKVLVG HDFSSFRA+ CQA
Sbjct: 159  AQERTYFYRLLSGPETLSTFEKDRAWHIPEELNLPAMQEACKVLVGHHDFSSFRASGCQA 218

Query: 551  KSPIRTLEELSVIEVASTPYFPSHFERNQ--------------------LGK-----DIS 655
            KSPIR+L+ELSV+EV  +PYFPS  +R                      LG      ++S
Sbjct: 219  KSPIRSLDELSVVEVTRSPYFPSVMDRENPINVTDDLHCFHSNSETVIPLGSSARIDEVS 278

Query: 656  GAQAAQEFGMRIRHRCLVVTARSRSFLYHQVRLLVGVLKSVGTRELTVPDVERILKAKTV 835
             ++    FG R  HRCLVVTAR+R+FLYHQVRLLVGVLK VGT  +TV DVERIL AKTV
Sbjct: 279  ASKEDVGFGKRRYHRCLVVTARARAFLYHQVRLLVGVLKDVGTGNITVTDVERILNAKTV 338

Query: 836  TAASPMAPACGLYLGQVKYDLP 901
            TA SPMAPACGLYLG+VKYDLP
Sbjct: 339  TATSPMAPACGLYLGEVKYDLP 360