BLASTX nr result
ID: Lithospermum22_contig00011473
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00011473
(1461 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002321729.1| predicted protein [Populus trichocarpa] gi|2... 389 e-164
ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like i... 377 e-160
ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [... 369 e-160
emb|CBI15710.3| unnamed protein product [Vitis vinifera] 369 e-157
ref|XP_003602781.1| RNA pseudourine synthase [Medicago truncatul... 362 e-157
>ref|XP_002321729.1| predicted protein [Populus trichocarpa] gi|222868725|gb|EEF05856.1|
predicted protein [Populus trichocarpa]
Length = 388
Score = 389 bits (998), Expect(2) = e-164
Identities = 186/249 (74%), Positives = 214/249 (85%)
Frame = +3
Query: 570 VHPCGQYRKNTIVGILEAEHGLAPLFPVHRLDRLVSGLLILARNASRADLFRQEIESGKV 749
VHPCGQYRKNT+VG+L+AEHGLAPLFPVHRLDRLVSGLLILARNA+RADLFRQEIE+GKV
Sbjct: 141 VHPCGQYRKNTVVGVLQAEHGLAPLFPVHRLDRLVSGLLILARNATRADLFRQEIEAGKV 200
Query: 750 QKQYIARVIGVFPENELVMNANVHYNAREGRSTVEVGDDYGNDENLLKGKAACTKFTRIS 929
QKQY+A+VIGVFPE+E +++ NV+YNAREGRSTVEVG+ D + +KGK ACTKFTRI
Sbjct: 201 QKQYVAKVIGVFPEDEQIVDVNVNYNAREGRSTVEVGNSC--DGSPIKGKTACTKFTRIG 258
Query: 930 TNGTHSIVLCEPVTGRTHQIRVHLQYTGHPIANDMLYLSESVVNRSSEGLAADRAASRSV 1109
TNG HSIVLC+P+TGRTHQIRVHLQYTGHPIAND+LYLSE+V NRSSEG+ ADRAA
Sbjct: 259 TNGIHSIVLCKPITGRTHQIRVHLQYTGHPIANDILYLSENVTNRSSEGVNADRAAHSPN 318
Query: 1110 GSLMLDCYETSNEKSGGDSCEDFSIDPMCTNCPNLAPKGYDGHEEGLFLHCVRYTGEGWS 1289
L+ + S++K + EDF IDPMCTNCPNL PKGYDGHEEGL+LHCV+Y+G GW
Sbjct: 319 NCLVPE--NNSSDKYEDSTEEDFDIDPMCTNCPNLVPKGYDGHEEGLWLHCVQYSGSGWV 376
Query: 1290 YDCPPPDWA 1316
Y CP PDWA
Sbjct: 377 YQCPYPDWA 385
Score = 216 bits (551), Expect(2) = e-164
Identities = 99/125 (79%), Positives = 114/125 (91%)
Frame = +1
Query: 112 MEIVWQTPANPPEHHDYIRRDGIRYVKPYYFEFISHAKNRWAGKTIVDLFSDEFKGRPPE 291
MEIVWQTPANPPE HDYI RDG R+V+PY+FEFISH KNRWAGKTIVDLF++EFKGRP +
Sbjct: 16 MEIVWQTPANPPEKHDYIFRDGRRHVRPYHFEFISHVKNRWAGKTIVDLFAEEFKGRPYD 75
Query: 292 YYVSAVKDGRIQVDGQKVPISHVVRSSQKISHFLHRHEPPVMAWDVEILHEEKDVVTVCK 471
YYVSAVK GRIQVDG+ VP+S++V+SSQKISHF+HRHEPPVMAWDV IL +E DVVTV K
Sbjct: 76 YYVSAVKCGRIQVDGEMVPVSYIVKSSQKISHFVHRHEPPVMAWDVPILDKEDDVVTVWK 135
Query: 472 PASIP 486
PA++P
Sbjct: 136 PATVP 140
>ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like isoform 2 [Vitis vinifera]
gi|359491114|ref|XP_002280549.2| PREDICTED: RNA
pseudourine synthase 7-like isoform 1 [Vitis vinifera]
Length = 386
Score = 377 bits (969), Expect(2) = e-160
Identities = 185/250 (74%), Positives = 213/250 (85%), Gaps = 1/250 (0%)
Frame = +3
Query: 570 VHPCGQYRKNTIVGILEAEHGLAPLFPVHRLDRLVSGLLILARNASRADLFRQEIESGKV 749
VHPCGQYRKNT+VGIL+AEHGLAPLFP+HRLDRLVSGLLILAR+AS+AD FRQ+IE+G V
Sbjct: 136 VHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILARSASKADSFRQQIEAGMV 195
Query: 750 QKQYIARVIGVFPENELVMNANVHYNAREGRSTVEVGDDYGNDENLLKGKAACTKFTRIS 929
QKQYIA+V GVFP++E V+N NV+YNAREGRSTVEVG+ GN LKGK+ACTKFTRIS
Sbjct: 196 QKQYIAKVTGVFPDDEQVVNVNVNYNAREGRSTVEVGNCCGNTP--LKGKSACTKFTRIS 253
Query: 930 TNGTHSIVLCEPVTGRTHQIRVHLQYTGHPIANDMLYLSESVVNRSSEGLAADRAASRSV 1109
TNGTHSIVLCEP+TGRTHQIRVHLQYTGHPIANDMLYLSE V+RS++GL+ADRAA+ S
Sbjct: 254 TNGTHSIVLCEPITGRTHQIRVHLQYTGHPIANDMLYLSEFSVDRSTKGLSADRAAANSG 313
Query: 1110 GSLMLDCYETS-NEKSGGDSCEDFSIDPMCTNCPNLAPKGYDGHEEGLFLHCVRYTGEGW 1286
SL ++ +E +S DFSIDPMCTNCPNL PKGYD EEGL+LHC+RY G W
Sbjct: 314 CSLPSSSPKSCVDEYCDDNSTVDFSIDPMCTNCPNLTPKGYDEDEEGLWLHCIRYCGPDW 373
Query: 1287 SYDCPPPDWA 1316
Y+CP P+WA
Sbjct: 374 VYECPHPEWA 383
Score = 216 bits (551), Expect(2) = e-160
Identities = 98/135 (72%), Positives = 120/135 (88%), Gaps = 3/135 (2%)
Frame = +1
Query: 91 MKRKPED---MEIVWQTPANPPEHHDYIRRDGIRYVKPYYFEFISHAKNRWAGKTIVDLF 261
MKR+ ++ MEIVWQTPANPPE HDYI R+G R+V+PYYFEFISH KNRWAGKTIVDLF
Sbjct: 1 MKRRRDEAAEMEIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLF 60
Query: 262 SDEFKGRPPEYYVSAVKDGRIQVDGQKVPISHVVRSSQKISHFLHRHEPPVMAWDVEILH 441
++EFKGRP +YYV+AV+ GRIQVDG+ VP+S++VRSSQKISHF+HRHEPPV+A DV +L
Sbjct: 61 TEEFKGRPYDYYVNAVQSGRIQVDGEMVPVSYIVRSSQKISHFVHRHEPPVLALDVSVLQ 120
Query: 442 EEKDVVTVCKPASIP 486
+E DV+T+CKPAS+P
Sbjct: 121 KEPDVLTICKPASVP 135
>ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
gi|223550244|gb|EEF51731.1| ribosomal pseudouridine
synthase, putative [Ricinus communis]
Length = 385
Score = 369 bits (948), Expect(2) = e-160
Identities = 179/252 (71%), Positives = 210/252 (83%)
Frame = +3
Query: 570 VHPCGQYRKNTIVGILEAEHGLAPLFPVHRLDRLVSGLLILARNASRADLFRQEIESGKV 749
VHPCGQYRKNT+VGIL+AEH LAPLFPVHRLDRLVSGLLILARNA +ADLFRQEIE+G V
Sbjct: 138 VHPCGQYRKNTVVGILQAEHNLAPLFPVHRLDRLVSGLLILARNALKADLFRQEIEAGMV 197
Query: 750 QKQYIARVIGVFPENELVMNANVHYNAREGRSTVEVGDDYGNDENLLKGKAACTKFTRIS 929
QKQY+A+V+GVFPE+E V+ N++YNAREGRST EVG+ + KGK ACTKFTRIS
Sbjct: 198 QKQYVAKVVGVFPEDEQVVGVNINYNAREGRSTAEVGNSCVDSPP--KGKTACTKFTRIS 255
Query: 930 TNGTHSIVLCEPVTGRTHQIRVHLQYTGHPIANDMLYLSESVVNRSSEGLAADRAASRSV 1109
TNGTHSIVLC+P+TGRTHQIRVHLQYTGHPIAND LYLSE +RS+EG++ADRAA S
Sbjct: 256 TNGTHSIVLCKPITGRTHQIRVHLQYTGHPIANDFLYLSEHAASRSAEGMSADRAACSS- 314
Query: 1110 GSLMLDCYETSNEKSGGDSCEDFSIDPMCTNCPNLAPKGYDGHEEGLFLHCVRYTGEGWS 1289
S + + ++ +S +DFSIDPMCTNCPNLAPKGYD +EE L+LHCV+Y+G GW
Sbjct: 315 -SYCVTPQDFCSDTHEENSVQDFSIDPMCTNCPNLAPKGYDVYEECLWLHCVQYSGPGWV 373
Query: 1290 YDCPPPDWADLT 1325
Y+CP PDWA L+
Sbjct: 374 YECPYPDWAILS 385
Score = 223 bits (568), Expect(2) = e-160
Identities = 104/137 (75%), Positives = 121/137 (88%), Gaps = 5/137 (3%)
Frame = +1
Query: 91 MKRKPE-----DMEIVWQTPANPPEHHDYIRRDGIRYVKPYYFEFISHAKNRWAGKTIVD 255
MKRK E DMEIVWQTPANPPE HDYI RDG R+V+PYYFEFISHAKNRWAGKTIVD
Sbjct: 1 MKRKREEENKNDMEIVWQTPANPPEKHDYIFRDGRRHVRPYYFEFISHAKNRWAGKTIVD 60
Query: 256 LFSDEFKGRPPEYYVSAVKDGRIQVDGQKVPISHVVRSSQKISHFLHRHEPPVMAWDVEI 435
LF++EFKGRP +YYVSAVK GRIQVDG+ VP+S++V+SSQKISHFLHRHEPPV AWD+ +
Sbjct: 61 LFAEEFKGRPYDYYVSAVKCGRIQVDGETVPVSYIVKSSQKISHFLHRHEPPVTAWDIPV 120
Query: 436 LHEEKDVVTVCKPASIP 486
L+++ DVVTV KPA++P
Sbjct: 121 LYKDPDVVTVYKPATVP 137
>emb|CBI15710.3| unnamed protein product [Vitis vinifera]
Length = 374
Score = 369 bits (947), Expect(2) = e-157
Identities = 183/250 (73%), Positives = 211/250 (84%), Gaps = 1/250 (0%)
Frame = +3
Query: 570 VHPCGQYRKNTIVGILEAEHGLAPLFPVHRLDRLVSGLLILARNASRADLFRQEIESGKV 749
VHPCGQYRKNT+VGIL+AEHGLAPLFP+HRLDRLVSGLLILAR+AS+AD FRQ+IE+G V
Sbjct: 126 VHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILARSASKADSFRQQIEAGMV 185
Query: 750 QKQYIARVIGVFPENELVMNANVHYNAREGRSTVEVGDDYGNDENLLKGKAACTKFTRIS 929
QKQYIA+V GVFP++E V+N NV+YNAREGRST VG+ GN LKGK+ACTKFTRIS
Sbjct: 186 QKQYIAKVTGVFPDDEQVVNVNVNYNAREGRST--VGNCCGNTP--LKGKSACTKFTRIS 241
Query: 930 TNGTHSIVLCEPVTGRTHQIRVHLQYTGHPIANDMLYLSESVVNRSSEGLAADRAASRSV 1109
TNGTHSIVLCEP+TGRTHQIRVHLQYTGHPIANDMLYLSE V+RS++GL+ADRAA+ S
Sbjct: 242 TNGTHSIVLCEPITGRTHQIRVHLQYTGHPIANDMLYLSEFSVDRSTKGLSADRAAANSG 301
Query: 1110 GSLMLDCYETS-NEKSGGDSCEDFSIDPMCTNCPNLAPKGYDGHEEGLFLHCVRYTGEGW 1286
SL ++ +E +S DFSIDPMCTNCPNL PKGYD EEGL+LHC+RY G W
Sbjct: 302 CSLPSSSPKSCVDEYCDDNSTVDFSIDPMCTNCPNLTPKGYDEDEEGLWLHCIRYCGPDW 361
Query: 1287 SYDCPPPDWA 1316
Y+CP P+WA
Sbjct: 362 VYECPHPEWA 371
Score = 214 bits (546), Expect(2) = e-157
Identities = 95/125 (76%), Positives = 114/125 (91%)
Frame = +1
Query: 112 MEIVWQTPANPPEHHDYIRRDGIRYVKPYYFEFISHAKNRWAGKTIVDLFSDEFKGRPPE 291
MEIVWQTPANPPE HDYI R+G R+V+PYYFEFISH KNRWAGKTIVDLF++EFKGRP +
Sbjct: 1 MEIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLFTEEFKGRPYD 60
Query: 292 YYVSAVKDGRIQVDGQKVPISHVVRSSQKISHFLHRHEPPVMAWDVEILHEEKDVVTVCK 471
YYV+AV+ GRIQVDG+ VP+S++VRSSQKISHF+HRHEPPV+A DV +L +E DV+T+CK
Sbjct: 61 YYVNAVQSGRIQVDGEMVPVSYIVRSSQKISHFVHRHEPPVLALDVSVLQKEPDVLTICK 120
Query: 472 PASIP 486
PAS+P
Sbjct: 121 PASVP 125
>ref|XP_003602781.1| RNA pseudourine synthase [Medicago truncatula]
gi|355491829|gb|AES73032.1| RNA pseudourine synthase
[Medicago truncatula]
Length = 380
Score = 362 bits (930), Expect(2) = e-157
Identities = 177/251 (70%), Positives = 205/251 (81%)
Frame = +3
Query: 570 VHPCGQYRKNTIVGILEAEHGLAPLFPVHRLDRLVSGLLILARNASRADLFRQEIESGKV 749
VHPCGQYRKNT+VGIL+AEHGLAPLFPVHRLDRLVSGLLI+ARNA++AD FRQEIE+G V
Sbjct: 137 VHPCGQYRKNTVVGILQAEHGLAPLFPVHRLDRLVSGLLIIARNATKADSFRQEIEAGLV 196
Query: 750 QKQYIARVIGVFPENELVMNANVHYNAREGRSTVEVGDDYGNDENLLKGKAACTKFTRIS 929
+KQYIA+V+G FPE+E++++AN+ YNAREGRST EV D KGK A TKFTRIS
Sbjct: 197 KKQYIAKVVGEFPEDEIIVDANIDYNAREGRSTAEVRDS-------TKGKVASTKFTRIS 249
Query: 930 TNGTHSIVLCEPVTGRTHQIRVHLQYTGHPIANDMLYLSESVVNRSSEGLAADRAASRSV 1109
+NGTHSIVLCEPVTGRTHQIRVHLQ +GHPIANDMLY+SE V+RS G ADR+A S
Sbjct: 250 SNGTHSIVLCEPVTGRTHQIRVHLQSSGHPIANDMLYISEQTVDRSINGSTADRSACISD 309
Query: 1110 GSLMLDCYETSNEKSGGDSCEDFSIDPMCTNCPNLAPKGYDGHEEGLFLHCVRYTGEGWS 1289
SL + E + +S EDF IDPMCTNCPNLAPKGYD EEGL+LHC+RY+G GW+
Sbjct: 310 ASLTSNFGEKVPKDYQENSNEDFRIDPMCTNCPNLAPKGYDTDEEGLWLHCMRYSGPGWT 369
Query: 1290 YDCPPPDWADL 1322
Y+CP PDWA L
Sbjct: 370 YECPYPDWAKL 380
Score = 220 bits (561), Expect(2) = e-157
Identities = 105/135 (77%), Positives = 120/135 (88%), Gaps = 3/135 (2%)
Frame = +1
Query: 91 MKRKPED---MEIVWQTPANPPEHHDYIRRDGIRYVKPYYFEFISHAKNRWAGKTIVDLF 261
MKRK E+ M+IVWQTPANPP DYI R+GIR+V+PYYFEFI+H KNRWAGKTIVDLF
Sbjct: 2 MKRKREEKECMDIVWQTPANPPLPQDYIVRNGIRFVRPYYFEFIAHVKNRWAGKTIVDLF 61
Query: 262 SDEFKGRPPEYYVSAVKDGRIQVDGQKVPISHVVRSSQKISHFLHRHEPPVMAWDVEILH 441
++EFKGRP EYYVSAVK GRIQVDG+ VP+S+VV+SSQKISHFLHRHEPPVMA DV ILH
Sbjct: 62 AEEFKGRPYEYYVSAVKCGRIQVDGEMVPVSYVVKSSQKISHFLHRHEPPVMACDVPILH 121
Query: 442 EEKDVVTVCKPASIP 486
+E DV+TVCKPAS+P
Sbjct: 122 KEPDVLTVCKPASVP 136