BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00011472
         (1837 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containi...   625   e-177
ref|XP_002331159.1| predicted protein [Populus trichocarpa] gi|1...   621   e-175
ref|XP_002527905.1| pentatricopeptide repeat-containing protein,...   611   e-172
ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containi...   597   e-168
ref|XP_002886593.1| pentatricopeptide repeat-containing protein ...   587   e-165

>ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770
            [Vitis vinifera]
          Length = 489

 Score =  625 bits (1613), Expect = e-177
 Identities = 314/488 (64%), Positives = 368/488 (75%)
 Frame = +2

Query: 128  MQQFVKKKTILSRSTKRYVXXXXXXXXXXXXXXXXXVRHQLNEFLKSHKKAYKWEVGHTL 307
            M Q  + K I  RS K+Y+                 VR QLN FLKS K+ +KWEVG T+
Sbjct: 3    MPQLSRTKNIAKRS-KKYLEEALYDRLFKDGSSEVSVRQQLNHFLKSSKRVFKWEVGDTV 61

Query: 308  KLLRQRKLYSPALKLSEKMERRGMNKTVSDQAIHLDLIGKGRDISAAETYFVNLPEASKN 487
            K LR RK + PALKLSE M +RGMN T+SDQAI+LDLI K R ++AAE YF++LPE SKN
Sbjct: 62   KKLRDRKRFYPALKLSETMAKRGMNMTISDQAIYLDLITKTRGVAAAENYFIDLPETSKN 121

Query: 488  HLTYGALLNCYCKELKIEEAESLIAKMKELNLAESAMPYNSLMTLYSKTGNPEKVPAIIQ 667
            HLTYGALLNCYCKEL  E+AE+L+ +MKEL L  S+MPYNSLMTLY+K G PEK+P IIQ
Sbjct: 122  HLTYGALLNCYCKELLTEKAEALMERMKELKLGLSSMPYNSLMTLYTKIGQPEKIPTIIQ 181

Query: 668  EMKAADVMPDAFTYNVWMRALAALNDISGVERVIDEMKRDGRVLDNWTTYSNLASIYVDA 847
            E+K+ D+MPD++TYN+WMRALAA+NDISGVERVI+EMKRDGRV  +WTTYSNLASIYVDA
Sbjct: 182  ELKSLDIMPDSYTYNIWMRALAAVNDISGVERVIEEMKRDGRVASDWTTYSNLASIYVDA 241

Query: 848  GFSDXXXXXXXXXXXXNACRDLSAFQFLITLYGRTGNLLEVYRVWRSLRLAFPKMANISY 1027
            G  +            NACRDL+AFQFLITLYGR GNLLEVYRVWRSLRLAFPK AN+SY
Sbjct: 242  GVFEKAEKALKELEKRNACRDLTAFQFLITLYGRIGNLLEVYRVWRSLRLAFPKTANVSY 301

Query: 1028 LNMIQVLVNLNDLPGAEKCFREWESGRSTYDIRIANVLIGAYXXXXXXXXXXXXXXXXXX 1207
            LNMIQVLVNL DLPGAEKCFREWESG S YDIR+AN LIGAY                  
Sbjct: 302  LNMIQVLVNLKDLPGAEKCFREWESGCSIYDIRVANALIGAYAKDGLLEKAEELKEHARR 361

Query: 1208 SGAKANAKTWEIFLDYHLKNGEIKSAVNCLDNAIAIGRGDGSKWIPSTAVVQQLMEHFEQ 1387
             GAK NAKTWEIFL YHLKN E+K AV+C+ NAI+ GRGDG KW+PS  ++   M+HFEQ
Sbjct: 362  RGAKPNAKTWEIFLAYHLKNREMKQAVDCVANAISTGRGDGQKWVPSPEIIGVFMQHFEQ 421

Query: 1388 TKDVEGAEGFLEIHKKAVDQLDKSLLESLLRTYATAGKTSSIMRRRVKMENVELSEDGKK 1567
             KDV+GAEGFLEI K  V+ L   + ESL+R YA AG+TS +MRRR+KMENVE+S+  KK
Sbjct: 422  EKDVDGAEGFLEILKSTVEDLGVEVFESLIRIYAAAGRTSPVMRRRLKMENVEVSDSCKK 481

Query: 1568 LLDAISLE 1591
            LL+ +S+E
Sbjct: 482  LLEEVSVE 489


>ref|XP_002331159.1| predicted protein [Populus trichocarpa] gi|118487894|gb|ABK95769.1|
            unknown [Populus trichocarpa] gi|222873242|gb|EEF10373.1|
            predicted protein [Populus trichocarpa]
          Length = 490

 Score =  621 bits (1602), Expect = e-175
 Identities = 314/487 (64%), Positives = 369/487 (75%)
 Frame = +2

Query: 131  QQFVKKKTILSRSTKRYVXXXXXXXXXXXXXXXXXVRHQLNEFLKSHKKAYKWEVGHTLK 310
            Q + + K++  RS K+Y+                 VR QLN+FLKS K+ +KWEVG T+K
Sbjct: 5    QLYGRTKSVTKRS-KKYLEEALYVRLFKEGSSEVSVRQQLNQFLKSSKRVFKWEVGDTIK 63

Query: 311  LLRQRKLYSPALKLSEKMERRGMNKTVSDQAIHLDLIGKGRDISAAETYFVNLPEASKNH 490
             LR R LY PA+KLSE M  RGMNKTVSDQAIHLDL+ K R I AAE YF++LPE SKN 
Sbjct: 64   KLRSRNLYYPAVKLSETMSSRGMNKTVSDQAIHLDLVAKTRGIPAAENYFIDLPETSKNL 123

Query: 491  LTYGALLNCYCKELKIEEAESLIAKMKELNLAESAMPYNSLMTLYSKTGNPEKVPAIIQE 670
             TYGALLNCYCKEL  EEAE+LI KMKELNL  S+M YNSLMTLY+K G PE++PAIIQE
Sbjct: 124  RTYGALLNCYCKELMTEEAEALIEKMKELNLGLSSMSYNSLMTLYTKVGQPERIPAIIQE 183

Query: 671  MKAADVMPDAFTYNVWMRALAALNDISGVERVIDEMKRDGRVLDNWTTYSNLASIYVDAG 850
            MKA +VMPD++TYNVWMRALAA+NDISGVERVI+EMKRDGRV  NWTTYSNLASIYVDAG
Sbjct: 184  MKADNVMPDSYTYNVWMRALAAVNDISGVERVIEEMKRDGRVAANWTTYSNLASIYVDAG 243

Query: 851  FSDXXXXXXXXXXXXNACRDLSAFQFLITLYGRTGNLLEVYRVWRSLRLAFPKMANISYL 1030
            + D            NA +DL AFQFLITLYGRTG L+EVYR+WRSLRLAFPK ANISYL
Sbjct: 244  YFDKAEKALKELEKINANKDLFAFQFLITLYGRTGKLIEVYRIWRSLRLAFPKTANISYL 303

Query: 1031 NMIQVLVNLNDLPGAEKCFREWESGRSTYDIRIANVLIGAYXXXXXXXXXXXXXXXXXXS 1210
            NMIQVLVNL D+PGAEKCFREWESG STYDIR+ANV+I AY                   
Sbjct: 304  NMIQVLVNLKDVPGAEKCFREWESGCSTYDIRVANVVISAYAKEGLVDKAEELKERARRR 363

Query: 1211 GAKANAKTWEIFLDYHLKNGEIKSAVNCLDNAIAIGRGDGSKWIPSTAVVQQLMEHFEQT 1390
            GAK N+KTWEIF DY+LKNG++K  V+C+ NA++ GRG+G KW+PS  +V  LM HFEQ 
Sbjct: 364  GAKPNSKTWEIFCDYYLKNGDVKLGVDCIANAVSAGRGNGQKWVPSPVIVGSLMAHFEQQ 423

Query: 1391 KDVEGAEGFLEIHKKAVDQLDKSLLESLLRTYATAGKTSSIMRRRVKMENVELSEDGKKL 1570
            KDV+GAE  +EI KKAVD +   + ESL+RTYA AG+ S +MRRR+KMENVE+S+D +KL
Sbjct: 424  KDVDGAEDLIEILKKAVDDVAVEVFESLIRTYAAAGRKSQLMRRRLKMENVEVSDDCQKL 483

Query: 1571 LDAISLE 1591
            L+AI +E
Sbjct: 484  LEAICVE 490


>ref|XP_002527905.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223532680|gb|EEF34462.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 490

 Score =  611 bits (1576), Expect = e-172
 Identities = 312/487 (64%), Positives = 362/487 (74%)
 Frame = +2

Query: 131  QQFVKKKTILSRSTKRYVXXXXXXXXXXXXXXXXXVRHQLNEFLKSHKKAYKWEVGHTLK 310
            Q F + K +  RS K+Y+                 VR QLN+FLKS K+ YKWEVG TLK
Sbjct: 5    QLFGRTKNVAKRS-KKYLEEALYFRLFKEGSSEVKVREQLNQFLKSSKRVYKWEVGDTLK 63

Query: 311  LLRQRKLYSPALKLSEKMERRGMNKTVSDQAIHLDLIGKGRDISAAETYFVNLPEASKNH 490
             LR R LY PALKLSE M +RGMNKTVSDQAIHLDL+ K R I AAE +F++LPE SKNH
Sbjct: 64   KLRSRGLYYPALKLSEAMSKRGMNKTVSDQAIHLDLVAKTRGIPAAEIFFIDLPETSKNH 123

Query: 491  LTYGALLNCYCKELKIEEAESLIAKMKELNLAESAMPYNSLMTLYSKTGNPEKVPAIIQE 670
            LTYGALLNCYC +L  EEAE+L+ KMKELNL  S+M YNSLMTLY+K G PE++P IIQE
Sbjct: 124  LTYGALLNCYCNQLMTEEAEALMEKMKELNLGLSSMSYNSLMTLYTKIGQPERIPGIIQE 183

Query: 671  MKAADVMPDAFTYNVWMRALAALNDISGVERVIDEMKRDGRVLDNWTTYSNLASIYVDAG 850
            MK+  +MPD++TYNVWMRALAA+NDISG ERVI+EMKRDGRV  +WTTYSNLASIYVDA 
Sbjct: 184  MKSDSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTYSNLASIYVDAQ 243

Query: 851  FSDXXXXXXXXXXXXNACRDLSAFQFLITLYGRTGNLLEVYRVWRSLRLAFPKMANISYL 1030
              +            N  RD SAFQFLITLYGR GNL E+YR+WRSLRLAFPK +NISYL
Sbjct: 244  LFEKAEKTLKELEKRNVHRDHSAFQFLITLYGRIGNLHELYRIWRSLRLAFPKTSNISYL 303

Query: 1031 NMIQVLVNLNDLPGAEKCFREWESGRSTYDIRIANVLIGAYXXXXXXXXXXXXXXXXXXS 1210
            NMIQVLVNL DLPGAEKCFREWES  S YDIR+ANVLI AY                   
Sbjct: 304  NMIQVLVNLKDLPGAEKCFREWESNCSGYDIRVANVLIKAYAKKGLLEKAEELKERAIGR 363

Query: 1211 GAKANAKTWEIFLDYHLKNGEIKSAVNCLDNAIAIGRGDGSKWIPSTAVVQQLMEHFEQT 1390
            GAK NAKTWEIF DY+ +NG+IK +V CL NAI+ GRGDG KWIPS  VV   M HFEQ 
Sbjct: 364  GAKPNAKTWEIFSDYYFENGDIKLSVECLANAISKGRGDGQKWIPSPEVVASFMAHFEQQ 423

Query: 1391 KDVEGAEGFLEIHKKAVDQLDKSLLESLLRTYATAGKTSSIMRRRVKMENVELSEDGKKL 1570
            KDV+GAEGF+EI KKA D ++ ++ ESL+RTYA AG+TS ++RRR+KMENVE+SE G+KL
Sbjct: 424  KDVDGAEGFIEILKKATDDVEANVFESLIRTYAAAGRTSQVLRRRLKMENVEVSEAGQKL 483

Query: 1571 LDAISLE 1591
            L+ I +E
Sbjct: 484  LEMICVE 490


>ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770-like
            [Glycine max]
          Length = 490

 Score =  597 bits (1539), Expect = e-168
 Identities = 307/490 (62%), Positives = 366/490 (74%)
 Frame = +2

Query: 122  SFMQQFVKKKTILSRSTKRYVXXXXXXXXXXXXXXXXXVRHQLNEFLKSHKKAYKWEVGH 301
            S MQ + + K+++ RS K+Y+                 VR  LN F+KS K+ YKWEVG 
Sbjct: 2    SIMQLYGRSKSVVKRS-KKYLEEALYMKLFKDGSSQLIVRQSLNNFVKSRKRVYKWEVGD 60

Query: 302  TLKLLRQRKLYSPALKLSEKMERRGMNKTVSDQAIHLDLIGKGRDISAAETYFVNLPEAS 481
            TLK LR RKLY PALKLSE M +R M KTVSD AIHLDL+ K R I+AAE YFV+LPE S
Sbjct: 61   TLKKLRDRKLYQPALKLSETMAKRNMIKTVSDHAIHLDLLAKARGITAAENYFVSLPEPS 120

Query: 482  KNHLTYGALLNCYCKELKIEEAESLIAKMKELNLAESAMPYNSLMTLYSKTGNPEKVPAI 661
            KNHL YGALLNCYCKEL  E++E L+ KMKEL+L  S+MPYNSLMTLY+K G PEK+P++
Sbjct: 121  KNHLCYGALLNCYCKELMTEKSEGLMEKMKELSLPLSSMPYNSLMTLYTKVGQPEKIPSL 180

Query: 662  IQEMKAADVMPDAFTYNVWMRALAALNDISGVERVIDEMKRDGRVLDNWTTYSNLASIYV 841
            IQEMKA++VM D++TYNVWMRALAA+NDISGVERV DEMKR G+V  +WTTYSNLASI+V
Sbjct: 181  IQEMKASNVMLDSYTYNVWMRALAAVNDISGVERVHDEMKRGGQVTGDWTTYSNLASIFV 240

Query: 842  DAGFSDXXXXXXXXXXXXNACRDLSAFQFLITLYGRTGNLLEVYRVWRSLRLAFPKMANI 1021
            DAG  D            NA +DL+A+QFLITLYGRTGNL EVYRVWRSLRLAFPK ANI
Sbjct: 241  DAGLFDKAEVALKELEKRNAFKDLTAYQFLITLYGRTGNLYEVYRVWRSLRLAFPKTANI 300

Query: 1022 SYLNMIQVLVNLNDLPGAEKCFREWESGRSTYDIRIANVLIGAYXXXXXXXXXXXXXXXX 1201
            SYLNMIQVLVNL DLPGAEKCFREWE G  TYDIR+ANVLI AY                
Sbjct: 301  SYLNMIQVLVNLKDLPGAEKCFREWECGCPTYDIRVANVLIRAYVKLDMLEKAEELKERA 360

Query: 1202 XXSGAKANAKTWEIFLDYHLKNGEIKSAVNCLDNAIAIGRGDGSKWIPSTAVVQQLMEHF 1381
               GAK NAKT EIF+DY+L  G+ K AV+ L+ AI++GRG+G KW+PS+ ++  +M HF
Sbjct: 361  RRRGAKPNAKTLEIFMDYYLLKGDFKLAVDYLNEAISMGRGNGEKWVPSSRIISIMMRHF 420

Query: 1382 EQTKDVEGAEGFLEIHKKAVDQLDKSLLESLLRTYATAGKTSSIMRRRVKMENVELSEDG 1561
            EQ KDV+GAE FLEI KK+V+     + ESL+RTYA AG+ SS M+RR+KMENVE+SE  
Sbjct: 421  EQEKDVDGAEEFLEILKKSVESPGVEVFESLIRTYAAAGRISSAMQRRLKMENVEVSEGT 480

Query: 1562 KKLLDAISLE 1591
            +KLL+AIS+E
Sbjct: 481  QKLLEAISVE 490


>ref|XP_002886593.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297332434|gb|EFH62852.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 491

 Score =  587 bits (1512), Expect = e-165
 Identities = 294/488 (60%), Positives = 350/488 (71%)
 Frame = +2

Query: 128  MQQFVKKKTILSRSTKRYVXXXXXXXXXXXXXXXXXVRHQLNEFLKSHKKAYKWEVGHTL 307
            M+   + + +  RSTK+Y+                 VR QLN+FLK  K  +KWEVG T+
Sbjct: 3    MRHLSRSRDVTKRSTKKYIEEPLYHRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTI 62

Query: 308  KLLRQRKLYSPALKLSEKMERRGMNKTVSDQAIHLDLIGKGRDISAAETYFVNLPEASKN 487
            K LR R LY PALKLSE ME RGMNKTVSDQAIHLDL+ K R I+A E YFV+LPE SK 
Sbjct: 63   KKLRNRGLYYPALKLSEVMEERGMNKTVSDQAIHLDLVAKARGITAGENYFVDLPETSKT 122

Query: 488  HLTYGALLNCYCKELKIEEAESLIAKMKELNLAESAMPYNSLMTLYSKTGNPEKVPAIIQ 667
             LTYG+LLNCYCKEL  E+AE L+ KMKELN+  S+M YNSLMTLY+KTG  EKVPA+IQ
Sbjct: 123  ELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGQTEKVPAMIQ 182

Query: 668  EMKAADVMPDAFTYNVWMRALAALNDISGVERVIDEMKRDGRVLDNWTTYSNLASIYVDA 847
            E+KA +VMPD++TYNVWMRALAA NDISGVERVI+EM RDGRV  +WTTYSN+ASIYVDA
Sbjct: 183  ELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDA 242

Query: 848  GFSDXXXXXXXXXXXXNACRDLSAFQFLITLYGRTGNLLEVYRVWRSLRLAFPKMANISY 1027
            G S             N  RD +A+QFLITLYGR G L EVYR+WRSLRLA PK +N++Y
Sbjct: 243  GLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAMPKTSNVAY 302

Query: 1028 LNMIQVLVNLNDLPGAEKCFREWESGRSTYDIRIANVLIGAYXXXXXXXXXXXXXXXXXX 1207
            LNMIQVLV LNDLPGAE  F+EW++  STYDIRI NVLIGAY                  
Sbjct: 303  LNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAKEGLIEKAKELKEKAPR 362

Query: 1208 SGAKANAKTWEIFLDYHLKNGEIKSAVNCLDNAIAIGRGDGSKWIPSTAVVQQLMEHFEQ 1387
             G KANAKTWEIF+DY++K+G++  A+ C+  A++IG+GDG KWIPS   V+ LM +FEQ
Sbjct: 363  RGGKANAKTWEIFMDYYVKSGDMAHALECMSKAVSIGKGDGGKWIPSQETVRTLMSYFEQ 422

Query: 1388 TKDVEGAEGFLEIHKKAVDQLDKSLLESLLRTYATAGKTSSIMRRRVKMENVELSEDGKK 1567
             KDV GAE  LEI K   D +   + ESL+RTYA AGK+   MRRR+KMENVE++E  KK
Sbjct: 423  KKDVNGAENLLEILKNGTDNIGAEIFESLIRTYAAAGKSHPAMRRRLKMENVEVNEVTKK 482

Query: 1568 LLDAISLE 1591
            LLD +S E
Sbjct: 483  LLDEVSQE 490