BLASTX nr result

ID: Lithospermum22_contig00011333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00011333
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323197.1| predicted protein [Populus trichocarpa] gi|1...    65   6e-09
ref|XP_002523681.1| ubiquitin-conjugating enzyme e2S, putative [...    62   4e-08
gb|AFV96171.1| ubiquitin conjugating enzyme S [Camellia oleifera]      60   1e-07
ref|XP_002308845.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_002323197.1| predicted protein [Populus trichocarpa] gi|118484859|gb|ABK94296.1|
           unknown [Populus trichocarpa]
           gi|222867827|gb|EEF04958.1| predicted protein [Populus
           trichocarpa]
          Length = 264

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/63 (55%), Positives = 44/63 (69%)
 Frame = +1

Query: 7   SNAMKGGNSKNQPIPISKPTETGAGASVSVPSLSVLKQKEVSLNKIQADKKKIDARKKSL 186
           + A K GNS++QP  +    ETG   SV+ P+ S LK K+V L K+QA KKK+DARKKSL
Sbjct: 203 TTASKVGNSQDQPAAVGPTHETGMSGSVAAPTPSTLK-KDVGLTKVQAGKKKMDARKKSL 261

Query: 187 KRL 195
           KRL
Sbjct: 262 KRL 264


>ref|XP_002523681.1| ubiquitin-conjugating enzyme e2S, putative [Ricinus communis]
           gi|223537081|gb|EEF38716.1| ubiquitin-conjugating enzyme
           e2S, putative [Ricinus communis]
          Length = 269

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 36/64 (56%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
 Frame = +1

Query: 7   SNAMKGGNSKNQPIPISKPTETGAGASVSVPSLSVLKQK-EVSLNKIQADKKKIDARKKS 183
           S A KGGNS+ Q   ++   ETG G SV+V + +V  QK E    K QADKKK+DARKKS
Sbjct: 206 SVATKGGNSQEQSAAVAPVPETGVGGSVAVATPTVATQKKEAGPAKAQADKKKLDARKKS 265

Query: 184 LKRL 195
           LKRL
Sbjct: 266 LKRL 269


>gb|AFV96171.1| ubiquitin conjugating enzyme S [Camellia oleifera]
          Length = 270

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/60 (53%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
 Frame = +1

Query: 19  KGGNSKNQPIP-ISKPTETGAGASVSVPSLSVLKQKEVSLNKIQADKKKIDARKKSLKRL 195
           KGGN ++QP   ++  TETG  +        V ++KEV+L K+QADKKK+DARKKSLKRL
Sbjct: 211 KGGNGQDQPASALNSTTETGVSSDSVAAPPPVTQKKEVTLAKVQADKKKMDARKKSLKRL 270


>ref|XP_002308845.1| predicted protein [Populus trichocarpa] gi|222854821|gb|EEE92368.1|
           predicted protein [Populus trichocarpa]
          Length = 268

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/61 (54%), Positives = 42/61 (68%)
 Frame = +1

Query: 13  AMKGGNSKNQPIPISKPTETGAGASVSVPSLSVLKQKEVSLNKIQADKKKIDARKKSLKR 192
           A KGGNS++Q   +    ET    S + P+ S LK K+V L+K+QA KKK+DARKKSLKR
Sbjct: 209 ASKGGNSQDQLAVVGPMHETEVSGSAAAPTTSTLK-KDVGLSKVQAVKKKMDARKKSLKR 267

Query: 193 L 195
           L
Sbjct: 268 L 268


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