BLASTX nr result

ID: Lithospermum22_contig00011277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00011277
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37213.1| unknown [Medicago truncatula]                          171   6e-41
gb|ADR71256.1| U6 snRNA-associated Sm-like protein LSm5 [Hevea b...   171   8e-41
ref|XP_002299989.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40
gb|AFK41754.1| unknown [Lotus japonicus]                              169   2e-40
ref|XP_004152020.1| PREDICTED: U6 snRNA-associated Sm-like prote...   169   3e-40

>gb|AFK37213.1| unknown [Medicago truncatula]
          Length = 87

 Score =  171 bits (434), Expect = 6e-41
 Identities = 83/85 (97%), Positives = 85/85 (100%)
 Frame = +3

Query: 123 NNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLKGFDVYVNMVLEDVTEYEITAEGRRV 302
           NNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTL+GFDVYVNMVLEDVTEYEITAEGRR+
Sbjct: 3   NNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRI 62

Query: 303 TKLDQILLNGNNIAILVPGGSPDPE 377
           TKLDQILLNGNNIAILVPGGSPDPE
Sbjct: 63  TKLDQILLNGNNIAILVPGGSPDPE 87


>gb|ADR71256.1| U6 snRNA-associated Sm-like protein LSm5 [Hevea brasiliensis]
          Length = 87

 Score =  171 bits (433), Expect = 8e-41
 Identities = 82/85 (96%), Positives = 85/85 (100%)
 Frame = +3

Query: 123 NNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLKGFDVYVNMVLEDVTEYEITAEGRRV 302
           NNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTL+GFDVYVNMVLEDVTEYE+TAEGRR+
Sbjct: 3   NNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEVTAEGRRI 62

Query: 303 TKLDQILLNGNNIAILVPGGSPDPE 377
           TKLDQILLNGNNIAILVPGGSPDPE
Sbjct: 63  TKLDQILLNGNNIAILVPGGSPDPE 87


>ref|XP_002299989.1| predicted protein [Populus trichocarpa]
           gi|224103927|ref|XP_002313247.1| predicted protein
           [Populus trichocarpa] gi|118484238|gb|ABK93999.1|
           unknown [Populus trichocarpa]
           gi|222847247|gb|EEE84794.1| predicted protein [Populus
           trichocarpa] gi|222849655|gb|EEE87202.1| predicted
           protein [Populus trichocarpa]
          Length = 88

 Score =  170 bits (431), Expect = 1e-40
 Identities = 85/89 (95%), Positives = 87/89 (97%)
 Frame = +3

Query: 111 MANHNNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLKGFDVYVNMVLEDVTEYEITAE 290
           MAN  NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTL+GFDVYVNMVLEDVTEYEITAE
Sbjct: 1   MAN-TNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAE 59

Query: 291 GRRVTKLDQILLNGNNIAILVPGGSPDPE 377
           GRR+TKLDQILLNGNNIAILVPGGSPDPE
Sbjct: 60  GRRITKLDQILLNGNNIAILVPGGSPDPE 88


>gb|AFK41754.1| unknown [Lotus japonicus]
          Length = 87

 Score =  169 bits (429), Expect = 2e-40
 Identities = 82/85 (96%), Positives = 85/85 (100%)
 Frame = +3

Query: 123 NNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLKGFDVYVNMVLEDVTEYEITAEGRRV 302
           +NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTL+GFDVYVNMVLEDVTEYEITAEGRR+
Sbjct: 3   SNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRI 62

Query: 303 TKLDQILLNGNNIAILVPGGSPDPE 377
           TKLDQILLNGNNIAILVPGGSPDPE
Sbjct: 63  TKLDQILLNGNNIAILVPGGSPDPE 87


>ref|XP_004152020.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like [Cucumis
           sativus] gi|449522508|ref|XP_004168268.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm5-like [Cucumis
           sativus]
          Length = 87

 Score =  169 bits (428), Expect = 3e-40
 Identities = 82/84 (97%), Positives = 84/84 (100%)
 Frame = +3

Query: 126 NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLKGFDVYVNMVLEDVTEYEITAEGRRVT 305
           NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTL+GFDVYVNMVLEDVTEYEITAEGRR+T
Sbjct: 4   NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRIT 63

Query: 306 KLDQILLNGNNIAILVPGGSPDPE 377
           KLDQILLNGNNIAILVPGGSPDPE
Sbjct: 64  KLDQILLNGNNIAILVPGGSPDPE 87


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