BLASTX nr result

ID: Lithospermum22_contig00011157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00011157
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB72814.1| putative 40S ribosomal protein S8-like protein [S...    80   3e-28
gb|ABA46755.1| unknown [Solanum tuberosum]                             74   4e-25
gb|AFK40150.1| unknown [Lotus japonicus]                               73   1e-24
ref|XP_003520991.1| PREDICTED: 40S ribosomal protein S8-like [Gl...    72   2e-24
ref|XP_004148331.1| PREDICTED: 40S ribosomal protein S8-like [Cu...    76   3e-24

>gb|ABB72814.1| putative 40S ribosomal protein S8-like protein [Solanum tuberosum]
          Length = 221

 Score = 79.7 bits (195), Expect(2) = 3e-28
 Identities = 49/101 (48%), Positives = 59/101 (58%), Gaps = 20/101 (19%)
 Frame = +2

Query: 161 LVYNASNNELVWSRVXXXXXXXXXXRMVY----------DIARKKGTMV----------A 280
           +VYNASNNELV ++              +          +I RKK +            A
Sbjct: 83  VVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGRKKKSAAKKEGEEAAEGA 142

Query: 281 AEANKSNHVQRKIQNRQKDRKIDPHVEEQFASGRLLAAITS 403
           AE  KSNHVQRK++ RQ+DRKIDPHVEEQFASGRLLAAI+S
Sbjct: 143 AEEKKSNHVQRKLEKRQQDRKIDPHVEEQFASGRLLAAISS 183



 Score = 70.5 bits (171), Expect(2) = 3e-28
 Identities = 35/49 (71%), Positives = 36/49 (73%)
 Frame = +3

Query: 6   MGISRDSMHKRRATGGXXXXXXXXXXYELGRQPGNTKLVPNEKTVRRIR 152
           MGISRDSMHKRRATGG          YE+GRQ  NTKLVPN KTVRRIR
Sbjct: 1   MGISRDSMHKRRATGGKKKSWRKKRKYEMGRQSANTKLVPNAKTVRRIR 49


>gb|ABA46755.1| unknown [Solanum tuberosum]
          Length = 224

 Score = 74.3 bits (181), Expect(2) = 4e-25
 Identities = 46/105 (43%), Positives = 54/105 (51%), Gaps = 24/105 (22%)
 Frame = +2

Query: 161 LVYNASNNELVWSRVXXXXXXXXXXRMVY----------DIARKK--------------G 268
           +VYNASNNELV ++              +          DI RKK               
Sbjct: 82  VVYNASNNELVRTQTLVKSAIIQVDAAPFKQWYLQHYGADIGRKKKGPAKKETTEEGEGA 141

Query: 269 TMVAAEANKSNHVQRKIQNRQKDRKIDPHVEEQFASGRLLAAITS 403
              A E  KSNHVQRKI+NRQKDR +DPH+EEQF  GRLLA I+S
Sbjct: 142 AAAAEETKKSNHVQRKIENRQKDRTLDPHLEEQFGGGRLLACISS 186



 Score = 65.5 bits (158), Expect(2) = 4e-25
 Identities = 35/49 (71%), Positives = 35/49 (71%)
 Frame = +3

Query: 6   MGISRDSMHKRRATGGXXXXXXXXXXYELGRQPGNTKLVPNEKTVRRIR 152
           MGISRDSMHKRRATGG          YELGRQP NTKL  N KTVRRIR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKL-SNNKTVRRIR 48


>gb|AFK40150.1| unknown [Lotus japonicus]
          Length = 217

 Score = 73.2 bits (178), Expect(2) = 1e-24
 Identities = 44/102 (43%), Positives = 55/102 (53%), Gaps = 21/102 (20%)
 Frame = +2

Query: 161 LVYNASNNELVWSRVXXXXXXXXXXRMVY----------DIARKK-----------GTMV 277
           +VYNASNNELV ++              +          +I RKK           G  V
Sbjct: 82  VVYNASNNELVRTQTLVKGAIVQVDAAPFKQWYLQHYGVEIGRKKKTAAKKDSTEEGEAV 141

Query: 278 AAEANKSNHVQRKIQNRQKDRKIDPHVEEQFASGRLLAAITS 403
           A +  KSNHVQRK++NRQKDR +D H+EEQF  GRLLA I+S
Sbjct: 142 AEDTKKSNHVQRKLENRQKDRTLDSHIEEQFGGGRLLACISS 183



 Score = 64.7 bits (156), Expect(2) = 1e-24
 Identities = 35/49 (71%), Positives = 35/49 (71%)
 Frame = +3

Query: 6   MGISRDSMHKRRATGGXXXXXXXXXXYELGRQPGNTKLVPNEKTVRRIR 152
           MGISRDSMHKRRATGG          YELGRQP NTKL  N KTVRRIR
Sbjct: 1   MGISRDSMHKRRATGGKQKTWRKKRKYELGRQPANTKLSSN-KTVRRIR 48


>ref|XP_003520991.1| PREDICTED: 40S ribosomal protein S8-like [Glycine max]
          Length = 220

 Score = 72.4 bits (176), Expect(2) = 2e-24
 Identities = 45/105 (42%), Positives = 55/105 (52%), Gaps = 24/105 (22%)
 Frame = +2

Query: 161 LVYNASNNELVWSRVXXXXXXXXXXRMVY----------DIARKKGTMV----------- 277
           +VYNASNNELV ++              +          +I RKK T             
Sbjct: 82  VVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGRKKKTAAKKETAEEGGDA 141

Query: 278 ---AAEANKSNHVQRKIQNRQKDRKIDPHVEEQFASGRLLAAITS 403
              A EA KSNHVQRK++ RQKDRK+D H+EEQF  GRLLA I+S
Sbjct: 142 AAAAEEAKKSNHVQRKLEKRQKDRKLDAHIEEQFGGGRLLACISS 186



 Score = 64.7 bits (156), Expect(2) = 2e-24
 Identities = 35/49 (71%), Positives = 35/49 (71%)
 Frame = +3

Query: 6   MGISRDSMHKRRATGGXXXXXXXXXXYELGRQPGNTKLVPNEKTVRRIR 152
           MGISRDSMHKRRATGG          YELGRQP NTKL  N KTVRRIR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSN-KTVRRIR 48


>ref|XP_004148331.1| PREDICTED: 40S ribosomal protein S8-like [Cucumis sativus]
           gi|449507060|ref|XP_004162922.1| PREDICTED: 40S
           ribosomal protein S8-like [Cucumis sativus]
          Length = 219

 Score = 76.3 bits (186), Expect(2) = 3e-24
 Identities = 45/102 (44%), Positives = 57/102 (55%), Gaps = 21/102 (20%)
 Frame = +2

Query: 161 LVYNASNNELVWSRVXXXXXXXXXXRMVY----------DIARKKGTMVAA--------- 283
           +VYNASNNELV ++              +          DI RKK T  +          
Sbjct: 82  VVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTSASVKKEEEGDAG 141

Query: 284 --EANKSNHVQRKIQNRQKDRKIDPHVEEQFASGRLLAAITS 403
             E  KSNHVQRKI+ RQ+DRK+DPH+EEQF+SGRL+A I+S
Sbjct: 142 TEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMACISS 183



 Score = 60.5 bits (145), Expect(2) = 3e-24
 Identities = 31/49 (63%), Positives = 35/49 (71%)
 Frame = +3

Query: 6   MGISRDSMHKRRATGGXXXXXXXXXXYELGRQPGNTKLVPNEKTVRRIR 152
           MGISRDSMHKRR TGG          YELGRQP NTKL  ++K++RRIR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKL-SSDKSIRRIR 48


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