BLASTX nr result
ID: Lithospermum22_contig00011105
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00011105
(1563 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containin... 299 1e-78
emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera] 298 2e-78
ref|XP_002516892.1| nucleic acid binding protein, putative [Rici... 284 5e-74
emb|CAN74119.1| hypothetical protein VITISV_002050 [Vitis vinifera] 279 1e-72
ref|XP_002267320.1| PREDICTED: zinc finger CCCH domain-containin... 278 4e-72
>ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containing protein 32 [Vitis
vinifera] gi|297736890|emb|CBI26091.3| unnamed protein
product [Vitis vinifera]
Length = 478
Score = 299 bits (766), Expect = 1e-78
Identities = 172/327 (52%), Positives = 202/327 (61%), Gaps = 22/327 (6%)
Frame = -2
Query: 1562 HHPQPAGFQVPASATGPGALAAPVPA--MYPTLQSPSVQLSQQYLVSRNWPVGRPALLPS 1389
HHPQP Q+ S GP AL APVPA +YPT+QSPSV SQQY V RP LLPS
Sbjct: 165 HHPQPDSIQL--STPGPAALPAPVPAHTLYPTVQSPSVPSSQQY----GLVVARPPLLPS 218
Query: 1388 SYIPGAYGPMLFPPGMVTIPGWTPYPAPVG-LASSSTQLSYGESPGYGIAQLSSSASPYA 1212
SY G Y P+L PPGMV PGW+ YPAPV +AS STQ + G YG+ LS SA Y
Sbjct: 219 SYFHGPYSPVLIPPGMVPFPGWSHYPAPVSPVASPSTQPTVGSGQMYGLTPLSPSAPAYT 278
Query: 1211 GQYLP-----GPSSNNQKEHAYPERPGQPECQHYMRTGDCKYGSSCKYHHPLDWSGPRTN 1047
G Y P GPSS++QKE +PERPGQPECQ+YMRTGDCK+GSSCKYHHP +W P+TN
Sbjct: 279 GPYTPLPSSVGPSSSSQKEQIFPERPGQPECQYYMRTGDCKFGSSCKYHHPPEWDTPKTN 338
Query: 1046 ----SDGPPFHP----------NGVSKDGASSKLDHPMGXXXXXXXXXXXTGVPVAPYSV 909
G P P G+ K G + K DHPMG +PVAPY V
Sbjct: 339 CVLSPMGLPLRPGAPQCTHYAQRGICKFGPTCKFDHPMGTLSYSPSASSLADMPVAPYPV 398
Query: 908 GSSAGTLAPASSSSDLRPEHVSGSSKDATLSTQMPSINSSSGPVGEAFSNSIPSVAHSTV 729
GSS GTLAP+SSSSDLRPE +SGSSK++ + S+++SSG VG FS S P HS+
Sbjct: 399 GSSMGTLAPSSSSSDLRPELISGSSKESLSTRMSSSMSTSSGSVGSIFSKSGP--GHSST 456
Query: 728 QQHGQSSTLASSSTGNAAQGGEVHPSS 648
QQ QSS STG+++ E H SS
Sbjct: 457 QQPVQSS---GPSTGSSS--SEAHTSS 478
Score = 65.1 bits (157), Expect = 5e-08
Identities = 35/76 (46%), Positives = 41/76 (53%), Gaps = 14/76 (18%)
Frame = -2
Query: 1163 YPERPGQPECQHYMRTGDCKYGSSCKYHHPLDWSG---PRT-NSDGPPFHP--------- 1023
+PER GQP CQ YM+TG CK+G+SCKYHHP G P T N G P P
Sbjct: 92 FPERVGQPVCQFYMKTGTCKFGASCKYHHPRQGGGTVSPVTLNYFGYPLRPGEKECSYYV 151
Query: 1022 -NGVSKDGASSKLDHP 978
G+ K G + K HP
Sbjct: 152 KTGLCKFGETCKFHHP 167
>emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera]
Length = 518
Score = 298 bits (764), Expect = 2e-78
Identities = 172/327 (52%), Positives = 202/327 (61%), Gaps = 22/327 (6%)
Frame = -2
Query: 1562 HHPQPAGFQVPASATGPGALAAPVPA--MYPTLQSPSVQLSQQYLVSRNWPVGRPALLPS 1389
HHPQP Q+ S GP AL APVPA +YP +QSPSV SQQY V RP LLPS
Sbjct: 205 HHPQPDSIQL--STPGPAALPAPVPAHTLYPXVQSPSVPSSQQY----GLVVARPPLLPS 258
Query: 1388 SYIPGAYGPMLFPPGMVTIPGWTPYPAPVG-LASSSTQLSYGESPGYGIAQLSSSASPYA 1212
SYI G Y P+L PPGMV PGW+ YPAPV +AS STQ + G YG+ LS SA Y
Sbjct: 259 SYIHGPYSPVLIPPGMVPFPGWSHYPAPVSPVASPSTQPTVGSGQMYGLTPLSPSAPAYT 318
Query: 1211 GQYLP-----GPSSNNQKEHAYPERPGQPECQHYMRTGDCKYGSSCKYHHPLDWSGPRTN 1047
G Y P GPSS++QKE +PERPGQPECQ+YMRTGDCK+GSSCKYHHP +W P+TN
Sbjct: 319 GPYTPLPSSVGPSSSSQKEQIFPERPGQPECQYYMRTGDCKFGSSCKYHHPPEWDTPKTN 378
Query: 1046 ----SDGPPFHP----------NGVSKDGASSKLDHPMGXXXXXXXXXXXTGVPVAPYSV 909
G P P G+ K G + K DHPMG +PVAPY V
Sbjct: 379 CVLSPMGLPLRPGAPQCTHYAQRGICKFGPTCKFDHPMGTLSYSPSASSLADMPVAPYPV 438
Query: 908 GSSAGTLAPASSSSDLRPEHVSGSSKDATLSTQMPSINSSSGPVGEAFSNSIPSVAHSTV 729
GSS GTLAP+SSSSDLRPE +SGSSK++ + S+++SSG VG FS S P HS+
Sbjct: 439 GSSMGTLAPSSSSSDLRPELISGSSKESLSTRMSSSMSTSSGSVGSIFSKSGP--GHSST 496
Query: 728 QQHGQSSTLASSSTGNAAQGGEVHPSS 648
QQ QSS STG+++ E H SS
Sbjct: 497 QQPVQSS---GPSTGSSS--SEAHTSS 518
Score = 65.1 bits (157), Expect = 5e-08
Identities = 35/76 (46%), Positives = 41/76 (53%), Gaps = 14/76 (18%)
Frame = -2
Query: 1163 YPERPGQPECQHYMRTGDCKYGSSCKYHHPLDWSG---PRT-NSDGPPFHP--------- 1023
+PER GQP CQ YM+TG CK+G+SCKYHHP G P T N G P P
Sbjct: 132 FPERVGQPVCQFYMKTGTCKFGASCKYHHPRQGGGTVSPVTLNYFGYPLRPGEKECSYYV 191
Query: 1022 -NGVSKDGASSKLDHP 978
G+ K G + K HP
Sbjct: 192 KTGLCKFGETCKFHHP 207
>ref|XP_002516892.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223543980|gb|EEF45506.1| nucleic acid binding protein,
putative [Ricinus communis]
Length = 481
Score = 284 bits (726), Expect = 5e-74
Identities = 164/327 (50%), Positives = 201/327 (61%), Gaps = 22/327 (6%)
Frame = -2
Query: 1562 HHPQPAGFQVPASATGPGALAAPVPA------MYPTLQSPSVQLSQQYLVSRNWPVGRPA 1401
HHPQPA Q+ A + P APVPA +YP +QSPSV +QQY V RP
Sbjct: 163 HHPQPANLQIQAQS--PALQVAPVPAPVPASALYPNVQSPSVPSTQQY----GLVVARPP 216
Query: 1400 LLPSSYIPGAYGPMLFPPGMVTIPGWTPYPAPVG-LASSSTQLSYGESPGYGIAQLSSSA 1224
LLP SY+ G YGPML PG+V P W+PYP P+ +AS STQL G S YGI QLS SA
Sbjct: 217 LLPGSYVQGPYGPMLVSPGVVPYPSWSPYPGPISPVASPSTQLGVG-SGVYGITQLSPSA 275
Query: 1223 SPYAGQYLPGPSSNNQKEH-AYPERPGQPECQHYMRTGDCKYGSSCKYHHPLDWSGPRTN 1047
Y G Y PSS+NQKE ++PERPGQPECQ+YM+TGDCK+GSSCKYHHP + P+TN
Sbjct: 276 PAYTGGYQAMPSSSNQKEQPSFPERPGQPECQYYMKTGDCKFGSSCKYHHPPELIAPKTN 335
Query: 1046 ----SDGPPFHP----------NGVSKDGASSKLDHPMGXXXXXXXXXXXTGVPVAPYSV 909
G P P G K G + K DHPMG + +PVAPY V
Sbjct: 336 VVLSPMGLPLRPGAPHCTHYTQRGQCKFGPACKFDHPMGSLSYSPSASSLSDMPVAPYPV 395
Query: 908 GSSAGTLAPASSSSDLRPEHVSGSSKDATLSTQMPSINSSSGPVGEAFSNSIPSVAHSTV 729
GSS GTLAP+SSSS+LRPE VSGSSKD++ + S++++SG VG FS S +V HS
Sbjct: 396 GSSMGTLAPSSSSSELRPELVSGSSKDSSSTRMSSSMSTTSGMVGSIFSKS-GTVHHSGA 454
Query: 728 QQHGQSSTLASSSTGNAAQGGEVHPSS 648
Q QSS L++ S+ +++ E H SS
Sbjct: 455 QLSSQSSGLSTGSSSSSSTSIEAHTSS 481
Score = 69.3 bits (168), Expect = 3e-09
Identities = 80/277 (28%), Positives = 97/277 (35%), Gaps = 49/277 (17%)
Frame = -2
Query: 1331 PGWT-PYPAPVGLASSSTQLSYGE-SPGYGIAQLSSSASPYAGQYLPGPSSNNQKEHA-- 1164
P WT P P V L QL GE PGY + Y G S + H
Sbjct: 17 PEWTGPGPETV-LEEGDWQLGLGEVEPGYPERPEEADCIYYLRTGFCGYGSRCRFNHPRD 75
Query: 1163 --------------YPERPGQPECQHYMRTGDCKYGSSCKYHHPLDWSGPRT----NSDG 1038
+PER GQP CQ+YMRTG CK+G+SCKYHHP G N G
Sbjct: 76 RGAVLGAARAGAAEFPERVGQPVCQYYMRTGTCKFGASCKYHHPKQGGGSANPVSLNYYG 135
Query: 1037 PPFHP----------NGVSKDGASSKLDHPMGXXXXXXXXXXXTGVPVAPYSVGSSA--- 897
P P G K G + K HP V P V +SA
Sbjct: 136 YPLRPGEKECTYYVKTGQCKFGVTCKFHHPQPANLQIQAQSPALQVAPVPAPVPASALYP 195
Query: 896 GTLAPASSSSD------LRPEHVSGSSKDATLSTQM--------PSINSSSGPVGEAFSN 759
+P+ S+ RP + GS + PS + GP+ S
Sbjct: 196 NVQSPSVPSTQQYGLVVARPPLLPGSYVQGPYGPMLVSPGVVPYPSWSPYPGPISPVASP 255
Query: 758 SIPSVAHSTVQQHGQSSTLASSSTGNAAQGGEVHPSS 648
S S V Q S A + TG G + PSS
Sbjct: 256 STQLGVGSGVYGITQLSPSAPAYTG----GYQAMPSS 288
>emb|CAN74119.1| hypothetical protein VITISV_002050 [Vitis vinifera]
Length = 1388
Score = 279 bits (714), Expect = 1e-72
Identities = 168/340 (49%), Positives = 202/340 (59%), Gaps = 28/340 (8%)
Frame = -2
Query: 1562 HHPQPAGFQVPASATGPGALAAPVPAMYPTLQSPSVQLSQQYL-VSRNWPVGRPALLPSS 1386
HHPQPAG +PASA P YPT+QSPSV QY S +W V RP +LP S
Sbjct: 201 HHPQPAGTSLPASA----------PTFYPTVQSPSVPTPTQYGGTSTSWRVPRPPVLPGS 250
Query: 1385 YIPGAYGPMLFPPGMVTIPGWTPYPAPVG-LASSSTQLSYGESPGYGIAQLSSS---ASP 1218
Y+ G YGP+LFPPG+V IPGW+PY PV + S Q + G YG+ QL S+ A P
Sbjct: 251 YVQGPYGPVLFPPGVVPIPGWSPYSTPVSPVLSPGAQPTVGAGSVYGVTQLPSTHTLAGP 310
Query: 1217 YAGQYLP---GPSSNNQKEHAYPERPGQPECQHYMRTGDCKYGSSCKYHHPLDWSGPRTN 1047
YA LP GPSS+NQKE +PERPGQ ECQ+Y+RTGDCK+GSSC+YHHP +W P+TN
Sbjct: 311 YAS--LPSSAGPSSSNQKEQVFPERPGQQECQYYLRTGDCKFGSSCRYHHPREWVVPKTN 368
Query: 1046 SD----GPPFHP----------NGVSKDGASSKLDHPMGXXXXXXXXXXXTGVPVAPYSV 909
G P P NG K G++ K DHP+G T +PVAPY V
Sbjct: 369 CVLSPLGLPLRPGVQPCTFYLQNGYCKFGSTCKFDHPLGNMRYSPSASSLTDMPVAPYPV 428
Query: 908 GSSAGTLAPASSSSDLRPEHVSGSSKDATLSTQMPSI-NSSSGPVGEAFSNSIPSVAHST 732
GSS TLAP+ SSSDLRP+ +SGS KD+ ST+MPS N++S VG FS + SV+ S
Sbjct: 429 GSSLATLAPSFSSSDLRPDFISGSKKDSH-STRMPSSGNTTSSSVGLIFSQT-GSVSLSD 486
Query: 731 VQQHGQSSTLASSST-----GNAAQGGEVHPSS*DGEFND 627
VQ GQSS SSS G A GE P + E ND
Sbjct: 487 VQLSGQSSAPLSSSRSTRQGGEATSPGEACPDPGESEIND 526
>ref|XP_002267320.1| PREDICTED: zinc finger CCCH domain-containing protein 32 isoform 1
[Vitis vinifera] gi|296086618|emb|CBI32253.3| unnamed
protein product [Vitis vinifera]
Length = 475
Score = 278 bits (710), Expect = 4e-72
Identities = 166/328 (50%), Positives = 201/328 (61%), Gaps = 23/328 (7%)
Frame = -2
Query: 1562 HHPQPAGFQVPASATGPGALAAPVPAMYPTLQSPSVQLSQQYL-VSRNWPVGRPALLPSS 1386
HHPQPAG +PASA P YPT+QSPSV QY S +W V RP +LP S
Sbjct: 163 HHPQPAGTSLPASA----------PTFYPTVQSPSVPTPTQYGGTSTSWRVPRPPVLPGS 212
Query: 1385 YIPGAYGPMLFPPGMVTIPGWTPYPAPVG-LASSSTQLSYGESPGYGIAQLSSS---ASP 1218
Y+ G YGP+LFPPG+V IPGW+PY PV + S Q + G YG+ QL S+ A P
Sbjct: 213 YVQGPYGPVLFPPGVVPIPGWSPYSTPVSPVLSPGAQPTVGAGSVYGVTQLPSTHTLAGP 272
Query: 1217 YAGQYLP---GPSSNNQKEHAYPERPGQPECQHYMRTGDCKYGSSCKYHHPLDWSGPRTN 1047
YA LP GPSS+NQKE +PERPGQ ECQ+Y+RTGDCK+GSSC+YHHP +W P+TN
Sbjct: 273 YAS--LPSSAGPSSSNQKEQVFPERPGQQECQYYLRTGDCKFGSSCRYHHPREWVVPKTN 330
Query: 1046 SD----GPPFHP----------NGVSKDGASSKLDHPMGXXXXXXXXXXXTGVPVAPYSV 909
G P P NG K G++ K DHP+G T +PVAPY V
Sbjct: 331 CVLSPLGLPLRPGVQPCTFYLQNGYCKFGSTCKFDHPLGNMRYSPSASSLTDMPVAPYPV 390
Query: 908 GSSAGTLAPASSSSDLRPEHVSGSSKDATLSTQMPSI-NSSSGPVGEAFSNSIPSVAHST 732
GSS TLAP+ SSSDLRP+ +SGS KD+ ST+MPS N++S VG FS + SV+ S
Sbjct: 391 GSSLATLAPSFSSSDLRPDFISGSKKDSH-STRMPSSGNTTSSSVGLIFSQT-GSVSLSD 448
Query: 731 VQQHGQSSTLASSSTGNAAQGGEVHPSS 648
VQ GQSS SSS + QGGEV S+
Sbjct: 449 VQLSGQSSAPLSSSR-STRQGGEVRRSN 475
Score = 60.1 bits (144), Expect = 2e-06
Identities = 44/145 (30%), Positives = 60/145 (41%), Gaps = 29/145 (20%)
Frame = -2
Query: 1325 WTPYPAPVGLASS------STQLSYGESPGY---------GIAQLSSSASPYAGQYLPGP 1191
W+P A GL S S++ SY E PG G S +
Sbjct: 21 WSPVRAVSGLEESMWRLGLSSRESYPERPGVADCVYYMKTGFCGFGSRCRYNHPRDRSSV 80
Query: 1190 SSNNQKEHAYPERPGQPECQHYMRTGDCKYGSSCKYHHPLDWSGPRT----NSDGPP--- 1032
S+ YPER G+P CQ Y++TG CK+G+SC++HHP + G + N G P
Sbjct: 81 STLRSGGGEYPERIGEPACQFYLKTGTCKFGASCRFHHPRNGGGSMSHVSLNIYGYPLRL 140
Query: 1031 -------FHPNGVSKDGASSKLDHP 978
+ G K G + K HP
Sbjct: 141 GEKECSYYLKTGQCKFGITCKFHHP 165