BLASTX nr result

ID: Lithospermum22_contig00011104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00011104
         (1031 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527480.1| conserved hypothetical protein [Ricinus comm...    67   5e-09
gb|ACI32850.1| S locus F-box protein 1 [Prunus spinosa]                62   2e-07
ref|XP_003594794.1| F-box protein [Medicago truncatula] gi|35548...    62   2e-07
dbj|BAC66624.1| F-box [Prunus mume]                                    62   3e-07
gb|ACI32844.1| S locus F-box protein 1, partial [Prunus spinosa]...    62   3e-07

>ref|XP_002527480.1| conserved hypothetical protein [Ricinus communis]
           gi|223533120|gb|EEF34878.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 379

 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 14/148 (9%)
 Frame = +3

Query: 27  NGLLCSSDDE----QLLTLWNPSIRSSLLLPKSDVE-SMTNERYAFGIFVDHITNDYKIL 191
           NG++C +D+     + + LWNPSI  S+ LP   +   ++N    FG   D  TNDYK++
Sbjct: 106 NGIICLTDNHSHILKRIVLWNPSIGLSVTLPLQRISYKVSNVVLGFGF--DSRTNDYKVI 163

Query: 192 RIV------DFKLVGAKIEIFRLSTGSWEVLNCQT--PFEFLDH-RQLDLKGVSYWVGVN 344
           RIV      D  +V  ++EIF LS G+W + N  +   ++   +  Q+ L+G  +WVG  
Sbjct: 164 RIVYYSTNDDSLMVPPEVEIFELSRGTWRINNSASVPAYDVSKYSSQIVLEGAIHWVGYY 223

Query: 345 FNANLILVSFNGHEELFGSAKIHVPDVI 428
               L +  +  H+E F   +  +PD I
Sbjct: 224 SPRELTIAVYVVHDEEF--KEFRMPDEI 249


>gb|ACI32850.1| S locus F-box protein 1 [Prunus spinosa]
          Length = 245

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 53/185 (28%), Positives = 82/185 (44%), Gaps = 32/185 (17%)
 Frame = +3

Query: 27  NGLLCSSDDEQLLTLWNPSIRSSLLLPKSDVESMTNERYAFGIFVDHITNDYKILRI--- 197
           NG++C S     L L NP+I+   LLPKS +         FG   D  + DYK+ RI   
Sbjct: 18  NGIVCLSPCSDNLVLCNPAIKEIKLLPKSSLPDWWGCAVGFG--YDPKSKDYKVSRIASY 75

Query: 198 ---VDFKLVGAKIEIFRLSTGSW-----EVLNCQTPFEFLDHRQLDLKGVSYWVGV---- 341
              +D  +   ++EI+ LST SW       L   T   F D+ Q+  +G+ YWVG     
Sbjct: 76  QAEIDGLIPPPRVEIYTLSTDSWREIKNNSLETDTTCFFPDYFQMYFQGICYWVGYEQPK 135

Query: 342 ------NFNANLILVSFNGHEELFGSAKIHVPD-----------VIDNRYSIECLLRLFL 470
                 +     +++ FN  +E+F +  +  PD             +  Y + C LR+ L
Sbjct: 136 QSVEYEDEEQKPMVIFFNTGDEIFHN--LLFPDSFYMYEEGSSYAYEMSYLMYCDLRIIL 193

Query: 471 FNESL 485
           +N S+
Sbjct: 194 WNGSI 198


>ref|XP_003594794.1| F-box protein [Medicago truncatula] gi|355483842|gb|AES65045.1|
           F-box protein [Medicago truncatula]
          Length = 374

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 12/142 (8%)
 Frame = +3

Query: 27  NGLLCSSD--DEQLLTLWNPSIRSSLLLPKSDVESMTN---ERYAFGIFVDHITNDYKIL 191
           NG+LC  +  D   + LWNP+     ++P +  ES+ N   +++ +G   DH ++DYK++
Sbjct: 124 NGILCIYNWFDPSQIVLWNPTTNEVHVVPSNLPESLPNVFVDQFLYGFGYDHDSDDYKVI 183

Query: 192 RIVD-----FKLVGAKIEIFRLSTGSWEVLNCQTPFEFLD--HRQLDLKGVSYWVGVNFN 350
           R+V      FK      EI+ L + SW  L+   P  F      ++ L GV +W+    N
Sbjct: 184 RVVRFREDMFKTHDPFYEIYSLRSHSWRKLDVDIPIVFYGPLSSEVYLDGVCHWLR-RIN 242

Query: 351 ANLILVSFNGHEELFGSAKIHV 416
               +VSFN   E+F +  + +
Sbjct: 243 DKTDVVSFNLSNEVFFTTPLDI 264


>dbj|BAC66624.1| F-box [Prunus mume]
          Length = 409

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 53/185 (28%), Positives = 82/185 (44%), Gaps = 32/185 (17%)
 Frame = +3

Query: 27  NGLLCSSDDEQLLTLWNPSIRSSLLLPKSDVESMTNERYAFGIFVDHITNDYKILRI--- 197
           NG++C S     L L NP+I+   LLPKS +         FG   D  + DYK+ RI   
Sbjct: 122 NGIVCISPCSDNLVLCNPAIKEIKLLPKSGLPDWWGCAVGFG--YDPKSKDYKVCRIASY 179

Query: 198 ---VDFKLVGAKIEIFRLSTGSW-----EVLNCQTPFEFLDHRQLDLKGVSYWVGV---- 341
              +D  +   ++EI+ LST SW       L   T   F D+ Q+  +G+ YWVG     
Sbjct: 180 QAEIDGLIPPPRVEIYTLSTDSWREIKNNSLETDTTCFFPDYFQMYFQGICYWVGYEQPK 239

Query: 342 ------NFNANLILVSFNGHEELFGSAKIHVPD-----------VIDNRYSIECLLRLFL 470
                 +     I++ F+  +E+F +  +  PD             +  Y + C LR+ L
Sbjct: 240 QSVEYEDEEQKPIVIFFDTGDEIFHN--LLFPDSFYKYEEGSSYAYEMSYLMYCDLRIIL 297

Query: 471 FNESL 485
           +N S+
Sbjct: 298 WNGSI 302


>gb|ACI32844.1| S locus F-box protein 1, partial [Prunus spinosa]
           gi|208972582|gb|ACI32848.1| S locus F-box protein 1,
           partial [Prunus spinosa]
          Length = 245

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 40/115 (34%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
 Frame = +3

Query: 27  NGLLCSSDDEQLLTLWNPSIRSSLLLPKSDVESMTNERYAFGIFVDHITNDYKILRI--- 197
           NG++C S     L L NP+I+   LLPKSD+         FG   D  + DYK+ RI   
Sbjct: 18  NGIVCLSPCSDNLVLCNPTIKEIKLLPKSDLPDWWGCAVGFG--YDPKSKDYKVSRIATY 75

Query: 198 ---VDFKLVGAKIEIFRLSTGSW-----EVLNCQTPFEFLDHRQLDLKGVSYWVG 338
              +D  +   ++EI+ +ST SW       L   T   F D+ Q+  +G+ YWVG
Sbjct: 76  QAEIDGLIPPPRVEIYSISTDSWREIKNNSLETDTTCFFPDYFQMYFQGICYWVG 130


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