BLASTX nr result

ID: Lithospermum22_contig00011086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00011086
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519577.1| Eukaryotic translation initiation factor 3 s...   171   6e-41
ref|XP_002284709.1| PREDICTED: eukaryotic translation initiation...   166   3e-39
ref|XP_002305897.1| predicted protein [Populus trichocarpa] gi|2...   164   7e-39
gb|ABK92969.1| unknown [Populus trichocarpa]                          164   7e-39
ref|XP_004155737.1| PREDICTED: eukaryotic translation initiation...   159   2e-37

>ref|XP_002519577.1| Eukaryotic translation initiation factor 3 subunit, putative
           [Ricinus communis] gi|223541235|gb|EEF42788.1|
           Eukaryotic translation initiation factor 3 subunit,
           putative [Ricinus communis]
          Length = 222

 Score =  171 bits (434), Expect = 6e-41
 Identities = 84/125 (67%), Positives = 98/125 (78%)
 Frame = -2

Query: 376 MEDWEDVPVPDILKKEPVKSTWDDEDVDDNAIKESWEDEDEPEPAPKTGPPVDKISKKTV 197
           MEDWED  +P ++ KE  KS WDDEDVDDN +KESWEDEDEP P P   PP +K +KK V
Sbjct: 1   MEDWEDEQIPPLILKEQPKSKWDDEDVDDNDVKESWEDEDEPAPEPVAKPPPEKATKKPV 60

Query: 196 AKTSEKKGKAIEVAKVDPAVEELDPVAEKLRQQRLVEEADYKATAELFGKKSDEKTIDNF 17
            K+ EKKGK + VAK +   + LDPVAEKLRQQRLVEEADY++T ELFGK+ DEKT+DNF
Sbjct: 61  TKSIEKKGKTV-VAKEES--QPLDPVAEKLRQQRLVEEADYRSTTELFGKRGDEKTLDNF 117

Query: 16  IPKSE 2
           IPKSE
Sbjct: 118 IPKSE 122


>ref|XP_002284709.1| PREDICTED: eukaryotic translation initiation factor 3 subunit J
           [Vitis vinifera] gi|296088327|emb|CBI36772.3| unnamed
           protein product [Vitis vinifera]
          Length = 222

 Score =  166 bits (419), Expect = 3e-39
 Identities = 82/127 (64%), Positives = 97/127 (76%), Gaps = 2/127 (1%)
 Frame = -2

Query: 376 MEDWEDVPVPDILKKEPVKSTWDDEDVDDNAIKESWEDEDEPEPAPKTGPPVDKISKKTV 197
           MEDWED P+  + KKE  K+ WDDED+DD+ +KESWEDEDEP PAP   PP +K  KK V
Sbjct: 1   MEDWEDEPITPLGKKEEPKNKWDDEDLDDDNVKESWEDEDEPAPAPVIQPPAEKPPKKPV 60

Query: 196 AKTSEKKGKAIEVAKVDPAVEE--LDPVAEKLRQQRLVEEADYKATAELFGKKSDEKTID 23
            K +EKKGKA+E      AV E  LDPVAEK+RQQRL+EEADYK+T ELF K+ DEKT+D
Sbjct: 61  EKATEKKGKAVE------AVTEVTLDPVAEKIRQQRLIEEADYKSTTELFAKRGDEKTLD 114

Query: 22  NFIPKSE 2
           +FIPKSE
Sbjct: 115 SFIPKSE 121


>ref|XP_002305897.1| predicted protein [Populus trichocarpa] gi|222848861|gb|EEE86408.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  164 bits (416), Expect = 7e-39
 Identities = 78/125 (62%), Positives = 96/125 (76%)
 Frame = -2

Query: 376 MEDWEDVPVPDILKKEPVKSTWDDEDVDDNAIKESWEDEDEPEPAPKTGPPVDKISKKTV 197
           MEDWED  VP ++ K+  KS WDDEDVD++ +KESWEDEDEP+PAP   PP +   KK  
Sbjct: 1   MEDWEDEQVPPLVAKDQPKSKWDDEDVDEDDVKESWEDEDEPDPAPVVKPPPEMAPKKPA 60

Query: 196 AKTSEKKGKAIEVAKVDPAVEELDPVAEKLRQQRLVEEADYKATAELFGKKSDEKTIDNF 17
            K++EKKG   +V K  P    LDP+AEKLRQQRLVEEAD+++TAELFGKK DEK++D+F
Sbjct: 61  VKSTEKKGNTTDVVKDQP----LDPLAEKLRQQRLVEEADFRSTAELFGKKDDEKSLDSF 116

Query: 16  IPKSE 2
           IPKSE
Sbjct: 117 IPKSE 121


>gb|ABK92969.1| unknown [Populus trichocarpa]
          Length = 222

 Score =  164 bits (416), Expect = 7e-39
 Identities = 78/125 (62%), Positives = 96/125 (76%)
 Frame = -2

Query: 376 MEDWEDVPVPDILKKEPVKSTWDDEDVDDNAIKESWEDEDEPEPAPKTGPPVDKISKKTV 197
           MEDWED  VP ++ K+  KS WDDEDVD++ +KESWEDEDEP+PAP   PP +   KK  
Sbjct: 1   MEDWEDEQVPPLVAKDQPKSKWDDEDVDEDDVKESWEDEDEPDPAPVVKPPPEMAPKKPA 60

Query: 196 AKTSEKKGKAIEVAKVDPAVEELDPVAEKLRQQRLVEEADYKATAELFGKKSDEKTIDNF 17
            K++EKKG   +V K  P    LDP+AEKLRQQRLVEEAD+++TAELFGKK DEK++D+F
Sbjct: 61  VKSTEKKGNTTDVVKDQP----LDPLAEKLRQQRLVEEADFRSTAELFGKKDDEKSLDSF 116

Query: 16  IPKSE 2
           IPKSE
Sbjct: 117 IPKSE 121


>ref|XP_004155737.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           J-like [Cucumis sativus]
          Length = 220

 Score =  159 bits (403), Expect = 2e-37
 Identities = 79/125 (63%), Positives = 95/125 (76%)
 Frame = -2

Query: 376 MEDWEDVPVPDILKKEPVKSTWDDEDVDDNAIKESWEDEDEPEPAPKTGPPVDKISKKTV 197
           M+DW+D  +P + K++P K+ WDDEDVD+N +KESWEDEDEP PAP   PP +   KK  
Sbjct: 1   MDDWDDENIPPLQKEQP-KNKWDDEDVDENDVKESWEDEDEPAPAPVVKPP-EAAPKKPA 58

Query: 196 AKTSEKKGKAIEVAKVDPAVEELDPVAEKLRQQRLVEEADYKATAELFGKKSDEKTIDNF 17
           AK +EKKGK ++V    P    LDP+AEKLRQQRLVEEADYK+T ELF KK DEKT+DNF
Sbjct: 59  AKATEKKGKIVDVEPEQP----LDPLAEKLRQQRLVEEADYKSTTELFKKKGDEKTLDNF 114

Query: 16  IPKSE 2
           IPKSE
Sbjct: 115 IPKSE 119


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