BLASTX nr result

ID: Lithospermum22_contig00011081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00011081
         (1523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543397.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A...   379   e-103
ref|XP_002277399.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A...   379   e-103
ref|XP_003540274.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A...   374   e-101
gb|ACU19018.1| unknown [Glycine max]                                  372   e-100
ref|XP_004139068.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A...   362   1e-97

>ref|XP_003543397.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Glycine max]
          Length = 398

 Score =  379 bits (974), Expect = e-103
 Identities = 206/381 (54%), Positives = 249/381 (65%), Gaps = 7/381 (1%)
 Frame = +1

Query: 217  IMEEPTMSETRLTSAAAFVEGGVQDACDDSCSICLEEFCESDPATVTGCKHEYHLQCILE 396
            I+ +   SE  LTSAAAFVEGG+QDACDD+CSICLE FC+SDP+TVT CKHE+HLQCILE
Sbjct: 11   IINDDNKSEAHLTSAAAFVEGGIQDACDDACSICLEAFCDSDPSTVTSCKHEFHLQCILE 70

Query: 397  WCQRSSQCPMCLQPISLKDPSSQELLDAIEHERNMRINQPRSTAIFHHPTLGDFELQHLP 576
            WCQRSSQCPMC QPISLKDP+SQELL+A+E ERN R N  R+  IFHHPTLGDFELQHLP
Sbjct: 71   WCQRSSQCPMCWQPISLKDPTSQELLEAVERERNFRFNPSRNATIFHHPTLGDFELQHLP 130

Query: 577  VNATDSELEERIIQHLAAAAAMGGTRHLVRREGQRGRPSSQGR-HFLVFSNHXXXXXXXX 753
            V A+D++LEERIIQHLAAAAAMG  RH+ RREGQR R S+QGR HFLVFS H        
Sbjct: 131  VGASDADLEERIIQHLAAAAAMGRARHVARREGQRNRSSAQGRQHFLVFSTHPNSPPMAP 190

Query: 754  XXXXEQRSGGGPAPPVILGGSDFPLVTAGEDTGQMITLQTPVQASQV--XXXXXXXXXXX 927
                  + G     P I   +  P    GE++ Q  TL +PVQA QV             
Sbjct: 191  ASSSPSQRGDDEPTPTIDVANLSPTPATGEESSQP-TLVSPVQAEQVSASGSGTTALATD 249

Query: 928  XXXXXXXXXXXXXXXXXXXQDSVGTSDLQSLSESLKTRFSAMSTRYKESITKSTRGWRER 1107
                               QD  G S+LQS SESLK++ +A+STRYKESI+KSTRGW+ER
Sbjct: 250  HQGSSYNNRRSPNQSSPSSQDRAGPSELQSFSESLKSKLNAVSTRYKESISKSTRGWKER 309

Query: 1108 LFARNTSTPESRVQVRREADAGAATIANMMERLGTAEDNR--TNMVPET--DISSVGSSP 1275
             F+RN +  +   +VRRE +AG AT++ MMERL T ++NR  +N  P    D S  GS+ 
Sbjct: 310  WFSRNNTMSDLGSEVRREVNAGIATVSRMMERLETRDNNRSNSNSAPSNIEDGSVQGSND 369

Query: 1276 PSLTDQHSAASICGDQYHSSS 1338
             +LT  +   S+  D    +S
Sbjct: 370  QTLTAGNEGGSLVRDNNTKAS 390


>ref|XP_002277399.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A [Vitis vinifera]
            gi|296084011|emb|CBI24399.3| unnamed protein product
            [Vitis vinifera]
          Length = 393

 Score =  379 bits (974), Expect = e-103
 Identities = 208/386 (53%), Positives = 247/386 (63%), Gaps = 4/386 (1%)
 Frame = +1

Query: 220  MEEPTMSETRLTSAAAFVEGGVQDACDDSCSICLEEFCESDPATVTGCKHEYHLQCILEW 399
            MEE   SE  LTSAAAFVEGG+Q+ACDD+CSICLE FC+SDP+TVT CKHE+HLQCILEW
Sbjct: 6    MEESNKSECHLTSAAAFVEGGIQEACDDACSICLEAFCDSDPSTVTSCKHEFHLQCILEW 65

Query: 400  CQRSSQCPMCLQPISLKDPSSQELLDAIEHERNMRINQPRSTAIFHHPTLGDFELQHLPV 579
            CQRSSQCPMC QPISLKDP+SQELL+A+E ER  R N  R+  IFHHPTLGDFELQHLPV
Sbjct: 66   CQRSSQCPMCWQPISLKDPTSQELLEAVERERTFRFNPSRNATIFHHPTLGDFELQHLPV 125

Query: 580  NATDSELEERIIQHLAAAAAMGGTRHLVRREGQRGRPSSQGR-HFLVFSNHXXXXXXXXX 756
             A D+ELEERIIQHLAAAAAMG  RH+ RREGQR R S+QGR  FLVFS H         
Sbjct: 126  GANDAELEERIIQHLAAAAAMGRARHIARREGQRTRSSAQGRPQFLVFSAHPSTPQAGPA 185

Query: 757  XXXEQRSGGGPAPPVILGGSDFPLVTA-GEDTGQMITLQTPVQASQV--XXXXXXXXXXX 927
                 + G     P I       L TA GE++ ++ T Q   QA ++             
Sbjct: 186  SSSPAQRGEDEPAPAITAAMPSSLPTAVGEESSRLTTSQLSSQAEEITASASGSIIHTTN 245

Query: 928  XXXXXXXXXXXXXXXXXXXQDSVGTSDLQSLSESLKTRFSAMSTRYKESITKSTRGWRER 1107
                               QD  G S+ QS SE+LK+RF+A+S RYKESI+KSTRGW+ER
Sbjct: 246  QHGTSSNNRRSPGQSLPSGQDKAGPSEFQSFSETLKSRFNAVSMRYKESISKSTRGWKER 305

Query: 1108 LFARNTSTPESRVQVRREADAGAATIANMMERLGTAEDNRTNMVPETDISSVGSSPPSLT 1287
            LF+RNTS  +    VRRE +AG AT++ MME L T +++RT     +D SS  +S PSL 
Sbjct: 306  LFSRNTSMADIGSDVRREVNAGIATVSRMMEHLETRDNSRTTPSSVSD-SSEDTSSPSLG 364

Query: 1288 DQHSAASICGDQYHSSSTDENPQPPC 1365
            DQ  A +      H+   D N Q  C
Sbjct: 365  DQRMAET----SAHNPLGDTNVQASC 386


>ref|XP_003540274.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Glycine max]
          Length = 401

 Score =  374 bits (959), Expect = e-101
 Identities = 193/335 (57%), Positives = 232/335 (69%), Gaps = 3/335 (0%)
 Frame = +1

Query: 238  SETRLTSAAAFVEGGVQDACDDSCSICLEEFCESDPATVTGCKHEYHLQCILEWCQRSSQ 417
            SE  LTSAAAFVEGG+QDACDD+CSICLE FC+SDP+TVT CKHE+HLQCILEWCQRSSQ
Sbjct: 21   SEAHLTSAAAFVEGGIQDACDDACSICLEAFCDSDPSTVTSCKHEFHLQCILEWCQRSSQ 80

Query: 418  CPMCLQPISLKDPSSQELLDAIEHERNMRINQPRSTAIFHHPTLGDFELQHLPVNATDSE 597
            CPMC QPISLKDP+SQELL+A+E ERN R N  R+  IFHHPTLGDFELQHLPV A+D++
Sbjct: 81   CPMCWQPISLKDPTSQELLEAVERERNFRFNPSRNATIFHHPTLGDFELQHLPVGASDAD 140

Query: 598  LEERIIQHLAAAAAMGGTRHLVRREGQRGRPSSQGR-HFLVFSNHXXXXXXXXXXXXEQR 774
            LEERIIQHLAAAAAMG  RH+ RREGQR R S+QGR HFLVFS +              +
Sbjct: 141  LEERIIQHLAAAAAMGRARHIARREGQRNRSSAQGRPHFLVFSTNPNSPPMAPASSSPSQ 200

Query: 775  SGGGPAPPVILGGSDFPLVTAGEDTGQMITLQTPVQASQV--XXXXXXXXXXXXXXXXXX 948
             G     P I   +  P    GE++ Q +TL  P+QA QV                    
Sbjct: 201  RGDDEPIPTIAVANLSPTPATGEESSQ-LTLVPPIQAEQVSASGSGSTALATDHQGSSYN 259

Query: 949  XXXXXXXXXXXXQDSVGTSDLQSLSESLKTRFSAMSTRYKESITKSTRGWRERLFARNTS 1128
                        QD  G S+LQS SESLK++ +A+STRYKESI+KSTRGW+ER F+RN +
Sbjct: 260  NRRSPNQSSPSSQDRAGPSELQSFSESLKSKLNAVSTRYKESISKSTRGWKERWFSRNNT 319

Query: 1129 TPESRVQVRREADAGAATIANMMERLGTAEDNRTN 1233
              +   +VRRE +AG AT++ MMERL T+++NR+N
Sbjct: 320  MSDLGSEVRREVNAGIATVSRMMERLETSDNNRSN 354


>gb|ACU19018.1| unknown [Glycine max]
          Length = 401

 Score =  372 bits (955), Expect = e-100
 Identities = 192/335 (57%), Positives = 231/335 (68%), Gaps = 3/335 (0%)
 Frame = +1

Query: 238  SETRLTSAAAFVEGGVQDACDDSCSICLEEFCESDPATVTGCKHEYHLQCILEWCQRSSQ 417
            SE  LTSAAAFVEGG+QDACDD+CSICLE FC+SDP+TVT CKHE+HLQCILEWCQRSSQ
Sbjct: 21   SEAHLTSAAAFVEGGIQDACDDACSICLEAFCDSDPSTVTSCKHEFHLQCILEWCQRSSQ 80

Query: 418  CPMCLQPISLKDPSSQELLDAIEHERNMRINQPRSTAIFHHPTLGDFELQHLPVNATDSE 597
            CPMC QPISLKDP+SQELL+A+E ERN R N  R+  IFHHPTLGDFELQHLPV A+D++
Sbjct: 81   CPMCWQPISLKDPTSQELLEAVERERNFRFNPSRNATIFHHPTLGDFELQHLPVGASDAD 140

Query: 598  LEERIIQHLAAAAAMGGTRHLVRREGQRGRPSSQGR-HFLVFSNHXXXXXXXXXXXXEQR 774
            LEERIIQHLAAAAAMG  RH+ RREGQR R S+QGR HFL FS +              +
Sbjct: 141  LEERIIQHLAAAAAMGRARHIARREGQRNRSSAQGRPHFLAFSTNPNSPPMAPASSSPSQ 200

Query: 775  SGGGPAPPVILGGSDFPLVTAGEDTGQMITLQTPVQASQV--XXXXXXXXXXXXXXXXXX 948
             G     P I   +  P    GE++ Q +TL  P+QA QV                    
Sbjct: 201  RGDDEPIPTIAVANLSPTPATGEESSQ-LTLVPPIQAEQVSASGSGSTALATDHQGSSYN 259

Query: 949  XXXXXXXXXXXXQDSVGTSDLQSLSESLKTRFSAMSTRYKESITKSTRGWRERLFARNTS 1128
                        QD  G S+LQS SESLK++ +A+STRYKESI+KSTRGW+ER F+RN +
Sbjct: 260  NRRSPNQSSPSSQDRAGPSELQSFSESLKSKLNAVSTRYKESISKSTRGWKERWFSRNNT 319

Query: 1129 TPESRVQVRREADAGAATIANMMERLGTAEDNRTN 1233
              +   +VRRE +AG AT++ MMERL T+++NR+N
Sbjct: 320  MSDLGSEVRREVNAGIATVSRMMERLETSDNNRSN 354


>ref|XP_004139068.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Cucumis sativus]
          Length = 389

 Score =  362 bits (929), Expect = 1e-97
 Identities = 202/389 (51%), Positives = 249/389 (64%), Gaps = 8/389 (2%)
 Frame = +1

Query: 220  MEEPTMSETR-----LTSAAAFVEGGVQDACDDSCSICLEEFCESDPATVTGCKHEYHLQ 384
            ME PTM ET+     LTSAAAFVEGG+QDACDD+CSICLE FC+SDP+T+T CKHE+HLQ
Sbjct: 1    MESPTMDETKKSEAHLTSAAAFVEGGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQ 60

Query: 385  CILEWCQRSSQCPMCLQPISLKDPSSQELLDAIEHERNMRINQPRSTAIFHHPTLGDFEL 564
            C+LEWCQRSSQCPMC Q ISLKDP+SQELL+A+E ER+ R+N  R++ IF HPTLGDFEL
Sbjct: 61   CVLEWCQRSSQCPMCWQSISLKDPTSQELLEAVEQERSFRLNPARNSTIFRHPTLGDFEL 120

Query: 565  QHLPVNATDSELEERIIQHLAAAAAMGGTRHLVRREGQRGRPSSQGR-HFLVFSNHXXXX 741
            QHLP  A D++LEERI+QHLAAAAAMG  RH  RRE  R R    GR  FLVFS+H    
Sbjct: 121  QHLPAGANDADLEERILQHLAAAAAMGQARHSARRESHRNRSGIHGRPQFLVFSSHPNSS 180

Query: 742  XXXXXXXXEQRSGGGPAPPVILGGSDFPLVTAGEDTGQMITLQTPVQASQ--VXXXXXXX 915
                    ++    G A P I+  S  P   AGE+  Q     +PVQ  Q          
Sbjct: 181  STSPSSGDDRE---GEAAPRIMVASISPPPPAGEEAPQSNASVSPVQTDQSSPSAPQSSS 237

Query: 916  XXXXXXXXXXXXXXXXXXXXXXXQDSVGTSDLQSLSESLKTRFSAMSTRYKESITKSTRG 1095
                                   QD  G S+LQS S+SLK+RF+AMS RYK+SITKST+G
Sbjct: 238  ASASQLGSPSSERRSSSQPVPNNQDRAGPSELQSFSDSLKSRFNAMSMRYKDSITKSTKG 297

Query: 1096 WRERLFARNTSTPESRVQVRREADAGAATIANMMERLGTAEDNRTNMVPETDISSVGSSP 1275
            W+E+LF+RNTS  +   +VRRE +AG AT++ MMERL T  D R +  PE+  SSVG + 
Sbjct: 298  WKEKLFSRNTSMSDIGSEVRREVNAGIATVSRMMERLET-RDARKSSSPES--SSVGGNS 354

Query: 1276 PSLTDQHSAASICGDQYHSSSTDENPQPP 1362
            P    + +  S+  +  +S STD N + P
Sbjct: 355  P--VSESNNRSMPENGGNSPSTDTNKEGP 381


Top