BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00011042
         (1454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271571.1| PREDICTED: uncharacterized protein LOC100251...   445   e-122
ref|XP_002519751.1| conserved hypothetical protein [Ricinus comm...   430   e-118
ref|XP_002331856.1| predicted protein [Populus trichocarpa] gi|2...   429   e-118
ref|XP_003629892.1| Ribosome maturation factor rimM [Medicago tr...   407   e-111
ref|NP_568663.2| RimM-like 16S rRNA processing protein [Arabidop...   403   e-110

>ref|XP_002271571.1| PREDICTED: uncharacterized protein LOC100251997 [Vitis vinifera]
            gi|297740629|emb|CBI30811.3| unnamed protein product
            [Vitis vinifera]
          Length = 665

 Score =  445 bits (1145), Expect = e-122
 Identities = 238/434 (54%), Positives = 309/434 (71%), Gaps = 9/434 (2%)
 Frame = -1

Query: 1277 ISPLYXXXXXXXXXTHESCSEFIEVGYVYSVHGLQGQVRIKSDTDFPELRFSQPGKRWLR 1098
            +SPL+         T +  SEF+EVGY+ SVHGLQG++R+K +TDFPELRF++PG RWLR
Sbjct: 56   LSPLHSTATEEVLETSKVESEFVEVGYISSVHGLQGEIRVKPNTDFPELRFAEPGIRWLR 115

Query: 1097 QEVSGREVVQEMELVEGIGHPGQKGWIVKFNGIDTVEEAQKLIGSTVLVVDEDRPVLEDD 918
            Q+ SG+E ++E+ELVEG GHPGQK WI+KF GIDTVEEA++L+GS++LV ++DRP LE+ 
Sbjct: 116  QQFSGKETIREVELVEGRGHPGQKTWILKFGGIDTVEEAKQLVGSSLLVREDDRPELEEG 175

Query: 917  EFYTRDLVGLRVILKETGEPVGVVVNVFDSGANDLLHVKLNSSVDISQEDENLKLGLDKS 738
            EFY+RDL+G+RV LKETGEPVG VVNVF +GANDLL V L+ SV       N K     S
Sbjct: 176  EFYSRDLLGMRVTLKETGEPVGTVVNVFSTGANDLLQVMLDPSVKTPDHTGNPKSETGVS 235

Query: 737  GPLVWIPFVEAIVPDVDLNKGEMLITPPKGLLELNIRSDEKSKKERRQLEWKERKKFQKR 558
            GPLVW+PFVEAIVP+VD+NK EM ITPPKGLLELN+RS E+SKKERRQLEWK+R+KFQ+R
Sbjct: 236  GPLVWVPFVEAIVPNVDMNKREMQITPPKGLLELNLRSHERSKKERRQLEWKQRRKFQRR 295

Query: 557  LIAAKKKLCEMEQQHVFHGFRCGEKDQRSALANQIVRVNSKLLQQAMFSTETQPKRSNFG 378
            LIAAKKKL EMEQQHVFHGFR G+K QRS LA+QIV VNSKLLQQA+ + E   +R +  
Sbjct: 296  LIAAKKKLHEMEQQHVFHGFRFGQKAQRSLLADQIVGVNSKLLQQALQNIELSSQRWSSS 355

Query: 377  EFIS---------SLHIKNKIIKDFSSDGTGEHTYLEFKSIGNSLAHSGKLACVLASEDW 225
            EFIS         +L +  K +    S+   +  + E +  G  L   GK+A VL   D 
Sbjct: 356  EFISTKLTKLGQRTLKVSKKCLTTPGSEEKLDSNF-ELQEKGLHLMSKGKMAIVLFVNDS 414

Query: 224  TKFSRQTAYNEHDYEVDEEDSCLLVKTLLNEESEFIKIDHRPSVPLVLIVPTNSIGTLQQ 45
             K  R +     D E    +S   ++TLL+++   +K + R SVPL+++ P + + +L+ 
Sbjct: 415  EKHGRCSVPELVDSE-SAGNSTSFLQTLLSDDRISLKKEDRVSVPLIMVSPAHEVHSLEN 473

Query: 44   LFIDHDYFAFSSEK 3
            LF +HD+FAF  +K
Sbjct: 474  LFSNHDHFAFDPKK 487


>ref|XP_002519751.1| conserved hypothetical protein [Ricinus communis]
            gi|223541168|gb|EEF42724.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 631

 Score =  430 bits (1106), Expect = e-118
 Identities = 226/415 (54%), Positives = 300/415 (72%), Gaps = 10/415 (2%)
 Frame = -1

Query: 1217 EFIEVGYVYSVHGLQGQVRIKSDTDFPELRFSQPGKRWLRQEVSGREVVQEMELVEGIGH 1038
            EF+EVGY+ SVHGLQG++ +K  TDFPELRFSQPG+RWLRQ++SG++++QE+EL+EG G+
Sbjct: 39   EFVEVGYLSSVHGLQGEICVKPSTDFPELRFSQPGRRWLRQQISGKDMIQEVELIEGRGY 98

Query: 1037 PGQKGWIVKFNGIDTVEEAQKLIGSTVLVVDEDRPVLEDDEFYTRDLVGLRVILKETGEP 858
             GQK WI++F+GIDTVE+A++L+GST+LV ++DRP LE+ +FYTRDLVG+RVILKETG+ 
Sbjct: 99   HGQKSWILRFDGIDTVEQARQLVGSTLLVREDDRPELEEGDFYTRDLVGMRVILKETGQC 158

Query: 857  VGVVVNVFDSGANDLLHVKLNSSVDISQEDENLKLG-LDKSGPLVWIPFVEAIVPDVDLN 681
            VG VVNVFDSGA DLL V L  +  + +  E L       S PLVW+PFVEAIVPDVD+ 
Sbjct: 159  VGTVVNVFDSGAGDLLQVMLCPTEGVPEGTEKLMTAETGVSSPLVWVPFVEAIVPDVDMT 218

Query: 680  KGEMLITPPKGLLELNIRSDEKSKKERRQLEWKERKKFQKRLIAAKKKLCEMEQQHVFHG 501
            K EM ITPPKGLL+LNIRSDE+SKKERRQLEWKERKKFQ+RLIAAKKKLCEMEQ+HVF G
Sbjct: 219  KREMWITPPKGLLKLNIRSDERSKKERRQLEWKERKKFQRRLIAAKKKLCEMEQKHVFDG 278

Query: 500  FRCGEKDQRSALANQIVRVNSKLLQQAMFSTETQPKRSNFGEFIS---------SLHIKN 348
             R GEK QRS+LA+QIV VNSKLLQQA+ +     +R    E IS         SL +  
Sbjct: 279  LRYGEKPQRSSLADQIVGVNSKLLQQALQNIGISFQRWGITELISATRTKLIQRSLKLSK 338

Query: 347  KIIKDFSSDGTGEHTYLEFKSIGNSLAHSGKLACVLASEDWTKFSRQTAYNEHDYEVDEE 168
            K +   +++      Y + +  G +L  +GK+  VL   +  K     + +  D +  E+
Sbjct: 339  KCLTPCATE-ESLTAYFDMQDKGLNLLSTGKVGIVLVVNEVDKNGTSHSPDVVDTKNSED 397

Query: 167  DSCLLVKTLLNEESEFIKIDHRPSVPLVLIVPTNSIGTLQQLFIDHDYFAFSSEK 3
             +  L++  L+++  F+K++ R  VPLVL+ P   I +L++LF D+DYF F ++K
Sbjct: 398  LAFSLLQKSLSDDQSFLKMEDRAFVPLVLVCPMQEIRSLKKLFSDNDYFGFDTDK 452


>ref|XP_002331856.1| predicted protein [Populus trichocarpa] gi|222875374|gb|EEF12505.1|
            predicted protein [Populus trichocarpa]
          Length = 673

 Score =  429 bits (1104), Expect = e-118
 Identities = 231/419 (55%), Positives = 303/419 (72%), Gaps = 10/419 (2%)
 Frame = -1

Query: 1229 ESCSEFIEVGYVYSVHGLQGQVRIKSDTDFPELRFSQPGKRWLRQEVSGREVVQEMELVE 1050
            +S SEF+EVGY+ +VHGLQG++ +K  TDFPELRFS+PG+RWLRQ VSG++V++E+ELVE
Sbjct: 79   KSESEFVEVGYISNVHGLQGEISVKPTTDFPELRFSKPGRRWLRQLVSGKDVIREVELVE 138

Query: 1049 GIGHPGQKGWIVKFNGIDTVEEAQKLIGSTVLVVDEDRPVLEDDEFYTRDLVGLRVILKE 870
            G GH G+K WI+KF GIDTV+ A+ L+GST+LV + +RP LE+ EFY+RDL+G+RVILKE
Sbjct: 139  GRGHHGRKSWILKFGGIDTVDRAKLLVGSTLLVREYERPELEEGEFYSRDLIGMRVILKE 198

Query: 869  TGEPVGVVVNVFDSGANDLLHVKLNSSVDI---SQEDENLKLGLDKSGPLVWIPFVEAIV 699
            TGE VG VVNVFD+G NDLL V L +S D+   + + +  + G+  SG L W+PFVEAIV
Sbjct: 199  TGECVGTVVNVFDNGGNDLLQVMLYTSSDVPGGTGKSKPAEAGV--SGHLAWVPFVEAIV 256

Query: 698  PDVDLNKGEMLITPPKGLLELNIRSDEKSKKERRQLEWKERKKFQKRLIAAKKKLCEMEQ 519
            PDV++N+ EM ITPPKGLLELN+R DE+SKKERR+LEW+ERKKFQ+RLIAAKKKLCEMEQ
Sbjct: 257  PDVNMNEREMRITPPKGLLELNLRQDERSKKERRELEWRERKKFQRRLIAAKKKLCEMEQ 316

Query: 518  QHVFHGFRCGEKDQRSALANQIVRVNSKLLQQAMFSTETQPKRSNFGEFISSL---HIKN 348
            +HVF G R G+K +R  LA+QIV VNSKLLQQA+ + E   KR +  E IS+    HIK+
Sbjct: 317  KHVFDGLRYGDKSKRGLLADQIVGVNSKLLQQALENIEISSKRCSATELISATRTKHIKS 376

Query: 347  KII--KDFSSDGTGEHTYLEFK--SIGNSLAHSGKLACVLASEDWTKFSRQTAYNEHDYE 180
             ++  K+F +    E     FK    G SL  +GK+A VL   D  K  +       D E
Sbjct: 377  SLMISKEFITCANEEKLGANFKLQEKGLSLISTGKVAIVLVLNDIEK-GKGDNPGVVDSE 435

Query: 179  VDEEDSCLLVKTLLNEESEFIKIDHRPSVPLVLIVPTNSIGTLQQLFIDHDYFAFSSEK 3
              E      ++  L+++  F+KI+ R SVPL+L+ P   I +LQ+LF ++DYFAF S K
Sbjct: 436  SSENSLLFFLQKSLSDDQTFVKIEDRVSVPLILVCPAQEIQSLQKLFSNNDYFAFDSNK 494


>ref|XP_003629892.1| Ribosome maturation factor rimM [Medicago truncatula]
            gi|355523914|gb|AET04368.1| Ribosome maturation factor
            rimM [Medicago truncatula]
          Length = 667

 Score =  407 bits (1047), Expect = e-111
 Identities = 226/450 (50%), Positives = 300/450 (66%), Gaps = 17/450 (3%)
 Frame = -1

Query: 1301 YSPTNLRPISPLYXXXXXXXXXTHESC-------SEFIEVGYVYSVHGLQGQVRIKSDTD 1143
            +SPT   PI   +          HE           F+++GYV  VHG QG VR+K +TD
Sbjct: 31   FSPTKHFPIHFHFHSLKAAITTHHEPVVVVDDNEPRFVDIGYVSGVHGFQGDVRVKPNTD 90

Query: 1142 FPELRFSQPGKRWLRQEVSGREVVQEMELVEGIGHPGQKGWIVKFNGIDTVEEAQKLIGS 963
            FPELRFS PG+RWL+Q+V G E VQE+EL EG  H GQ  WI+KF+GID+ EEA+ LIG+
Sbjct: 91   FPELRFSTPGRRWLKQKVMGGENVQEIELEEGREHSGQNCWILKFSGIDSAEEAKILIGA 150

Query: 962  TVLVVDEDRPVLEDDEFYTRDLVGLRVILKETGEPVGVVVNVFDSGANDLLHVKLNSSVD 783
            T+LV +EDRP LE+ EFYT DL G+RV +KE G+ +G V+NVF++GANDLL + L+SS D
Sbjct: 151  TLLVTEEDRPELEEGEFYTHDLNGMRVFMKENGKLLGTVINVFNNGANDLLQISLDSSFD 210

Query: 782  ISQEDENLK-LGLDKSGPLVWIPFVEAIVPDVDLNKGEMLITPPKGLLELNIRSDEKSKK 606
            +  ++   K   ++ SG LV +PFVEAIVPDVD+N+ EM ITPPKGLLELN+R D++SKK
Sbjct: 211  VLDKNGKPKPEEIEASGQLVLVPFVEAIVPDVDMNRREMHITPPKGLLELNLRFDDRSKK 270

Query: 605  ERRQLEWKERKKFQKRLIAAKKKLCEMEQQHVFHGFRCGEKDQRSALANQIVRVNSKLLQ 426
            ERRQLEWKERKKFQKRLIAAKKKL EM+QQHVFHGF+CGEK+Q S L++QIV VNS+LLQ
Sbjct: 271  ERRQLEWKERKKFQKRLIAAKKKLREMDQQHVFHGFQCGEKEQWSLLSDQIVGVNSRLLQ 330

Query: 425  QAMFSTETQPKRSNFGEFISSLHIKNKIIKDFSSDG--TGEHTYL-----EFKSIGNSLA 267
            +A+ S E    R N  E +S++  K       S     TG  T L       K  G  L 
Sbjct: 331  EALQSLEQPANRWNAAELVSAMEEKRIRTVQISERSLLTGSKTKLVRNIINMKEKGVELI 390

Query: 266  HSGKLACVLASEDWTKFSRQTAYNEH--DYEVDEEDSCLLVKTLLNEESEFIKIDHRPSV 93
             +GK+A VL  ++  K +    Y+    + E  E  +  +++ LL++  +F+K++ R SV
Sbjct: 391  SNGKMAIVLLLKE--KENEGCIYDPEVVENEATETSTLHMLQNLLSDHEKFVKVNDRVSV 448

Query: 92   PLVLIVPTNSIGTLQQLFIDHDYFAFSSEK 3
            PL+L+     I +L+ LF  +++FAF SEK
Sbjct: 449  PLILVSSAQQIQSLRNLFTRNNHFAFDSEK 478


>ref|NP_568663.2| RimM-like 16S rRNA processing protein [Arabidopsis thaliana]
            gi|10177579|dbj|BAB10810.1| unnamed protein product
            [Arabidopsis thaliana] gi|332008000|gb|AED95383.1|
            RimM-like 16S rRNA processing protein [Arabidopsis
            thaliana]
          Length = 653

 Score =  403 bits (1035), Expect = e-110
 Identities = 211/417 (50%), Positives = 291/417 (69%), Gaps = 12/417 (2%)
 Frame = -1

Query: 1217 EFIEVGYVYSVHGLQGQVRIKSDTDFPELRFSQPGKRWLRQEVSGREVVQEMELVEGIGH 1038
            + +EVG++  VHGLQG++ IK +TDFP+LRFS+PG+RWL+Q++ G++ + E+ELVEG  H
Sbjct: 79   DLVEVGFLSGVHGLQGEICIKPNTDFPDLRFSKPGRRWLKQQLLGQDKIDEVELVEGRPH 138

Query: 1037 PGQKGWIVKFNGIDTVEEAQKLIGSTVLVVDEDRPVLEDDEFYTRDLVGLRVILKETGEP 858
            P QK WI+KF G+D V++ ++L+G+T+L  D+DRP L++ EFY+RDLVG+RV+LKETG+ 
Sbjct: 139  PAQKSWILKFRGLDDVDQVRQLVGATLLAEDDDRPELDEGEFYSRDLVGMRVLLKETGQL 198

Query: 857  VGVVVNVFDSGANDLLHVKLNSSVDISQEDENLKLGLDKSGPLVWIPFVEAIVPDVDLNK 678
            VG V N+FD+G NDLLHV L+SS+++         G  K+  LVWIPFV+AIVPDVDL +
Sbjct: 199  VGTVANIFDNGGNDLLHVLLDSSMEVCN-------GNAKTNQLVWIPFVDAIVPDVDLER 251

Query: 677  GEMLITPPKGLLELNIRSDEKSKKERRQLEWKERKKFQKRLIAAKKKLCEMEQQHVFHGF 498
             EM ITPPKGLLE+N+R+D++SKKERRQLEWKERKK QKRLIAAKKKLCEMEQ+HVF G 
Sbjct: 252  KEMYITPPKGLLEVNMRADDRSKKERRQLEWKERKKQQKRLIAAKKKLCEMEQKHVFDGL 311

Query: 497  RCGEKDQRSALANQIVRVNSKLLQQAMFSTETQPKRSNFGEFISSLHI----------KN 348
            R GEK QR+ LA+ I+ VNS LLQ+A+ S +T  KR N  E I++L            + 
Sbjct: 312  RFGEKSQRNLLADHILNVNSTLLQKALQSIDTSSKRWNVTEEINALRARVSECNLSVSRE 371

Query: 347  KIIKDFSSDGTGEHTYLEFKSIGNSLAHSGKLACVLASEDWTKFSRQTAYNEHDYEVDEE 168
             +  D S +  G++    F   G +L   GK++  L              N+H+ E  E 
Sbjct: 372  CLSFDASKENMGDN--FSFLQQGQNLFSEGKVSICL------------VLNDHENEEPEG 417

Query: 167  DSCLL--VKTLLNEESEFIKIDHRPSVPLVLIVPTNSIGTLQQLFIDHDYFAFSSEK 3
            ++ ++  +  LL+EE  FIK + R  VPLV++ P ++I  LQ+LF D+D+F F SEK
Sbjct: 418  ENGVVSYLHALLDEEQRFIKEEDRACVPLVIVSPEHTIEALQKLFQDNDHFGFESEK 474