BLASTX nr result

ID: Lithospermum22_contig00010384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00010384
         (915 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311076.1| predicted protein [Populus trichocarpa] gi|2...   342   9e-92
ref|XP_002270699.1| PREDICTED: ras-related protein RABF1 [Vitis ...   340   2e-91
ref|XP_002316386.1| predicted protein [Populus trichocarpa] gi|1...   340   4e-91
emb|CAA98167.1| RAB5B [Lotus japonicus] gi|388498868|gb|AFK37500...   337   2e-90
gb|ABC59814.1| small GTPase Rab5b [Nicotiana tabacum]                 335   7e-90

>ref|XP_002311076.1| predicted protein [Populus trichocarpa] gi|222850896|gb|EEE88443.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score =  342 bits (876), Expect = 9e-92
 Identities = 173/201 (86%), Positives = 182/201 (90%), Gaps = 1/201 (0%)
 Frame = +2

Query: 17  MGCSSSLPDRNP-TXXXXXXXXXXXXXDPKNLKVKLVLLGDSGVGKSCIVLRFVRGQFDP 193
           MGCSSSLPDR+                D KNL+VKLVLLGDSGVGKSCIVLRFVRGQFDP
Sbjct: 1   MGCSSSLPDRSTGRLGGLNNSESGGVVDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP 60

Query: 194 TSKVTVGASFLSQTIALQDSTTIKFEIWDTAGQERYAALAPLYYRGAAVAVIAYDITSPD 373
           TSKVT+GASFLSQTIALQDSTT+KFEIWDTAGQERYAALAPLYYRGAAVAVI YDITSP+
Sbjct: 61  TSKVTIGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPE 120

Query: 374 TFSKAQYWVKELQKHGNPDIVMALVGNKADLQEKREVPTQDGIDYAEKNGMFFIETSAKT 553
           TF+KAQYWVKELQKHG+PDIVMALVGNKADLQEKREVPTQDGIDYAEKNGMFF+ETSAKT
Sbjct: 121 TFNKAQYWVKELQKHGSPDIVMALVGNKADLQEKREVPTQDGIDYAEKNGMFFMETSAKT 180

Query: 554 ADNINQLFEEIAKRIPRPSLT 616
           ADNINQLFEEIAKR+PRPS T
Sbjct: 181 ADNINQLFEEIAKRLPRPSST 201


>ref|XP_002270699.1| PREDICTED: ras-related protein RABF1 [Vitis vinifera]
           gi|147864853|emb|CAN79376.1| hypothetical protein
           VITISV_009584 [Vitis vinifera]
           gi|296085986|emb|CBI31427.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  340 bits (873), Expect = 2e-91
 Identities = 170/198 (85%), Positives = 178/198 (89%)
 Frame = +2

Query: 17  MGCSSSLPDRNPTXXXXXXXXXXXXXDPKNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPT 196
           MGCSSSLPDRN               D KNL+VKLVLLGDSGVGKSCIVLRFVRGQFDPT
Sbjct: 1   MGCSSSLPDRNSGRLGGLNAENGGAPDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT 60

Query: 197 SKVTVGASFLSQTIALQDSTTIKFEIWDTAGQERYAALAPLYYRGAAVAVIAYDITSPDT 376
           SKVTVGASFLSQTIALQDSTT+KFEIWDTAGQERYAALAPLYYRGAAVAV+ YDITSP++
Sbjct: 61  SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITSPES 120

Query: 377 FSKAQYWVKELQKHGNPDIVMALVGNKADLQEKREVPTQDGIDYAEKNGMFFIETSAKTA 556
           F+KAQYWVKELQKHG+PDIVMALVGNKADL E REVP QDGIDYAEKNGMFFIETSAKTA
Sbjct: 121 FNKAQYWVKELQKHGSPDIVMALVGNKADLHENREVPVQDGIDYAEKNGMFFIETSAKTA 180

Query: 557 DNINQLFEEIAKRIPRPS 610
           DNINQLFEEIAKR+PRPS
Sbjct: 181 DNINQLFEEIAKRLPRPS 198


>ref|XP_002316386.1| predicted protein [Populus trichocarpa] gi|118488888|gb|ABK96253.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222865426|gb|EEF02557.1| predicted protein [Populus
           trichocarpa]
          Length = 201

 Score =  340 bits (871), Expect = 4e-91
 Identities = 173/201 (86%), Positives = 181/201 (90%), Gaps = 1/201 (0%)
 Frame = +2

Query: 17  MGCSSSLPDRNP-TXXXXXXXXXXXXXDPKNLKVKLVLLGDSGVGKSCIVLRFVRGQFDP 193
           MGCSSSLPDR+                D KNL+VKLVLLGDSGVGKSCIVLRFVRGQFDP
Sbjct: 1   MGCSSSLPDRSTGRLGGLNNSESGGVADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP 60

Query: 194 TSKVTVGASFLSQTIALQDSTTIKFEIWDTAGQERYAALAPLYYRGAAVAVIAYDITSPD 373
           TSKVT+GASFLSQTIALQDSTTIKFEIWDTAGQERYAALAPLYYRGAAVAVI YDITSP+
Sbjct: 61  TSKVTIGASFLSQTIALQDSTTIKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPE 120

Query: 374 TFSKAQYWVKELQKHGNPDIVMALVGNKADLQEKREVPTQDGIDYAEKNGMFFIETSAKT 553
           TF+KAQYWVKELQKHG+PDIVMALVGNKADL EKREVPTQDGI+YAEKNGMFFIETSAKT
Sbjct: 121 TFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPTQDGIEYAEKNGMFFIETSAKT 180

Query: 554 ADNINQLFEEIAKRIPRPSLT 616
           ADNINQLFEEIAKR+PRPS T
Sbjct: 181 ADNINQLFEEIAKRLPRPSST 201


>emb|CAA98167.1| RAB5B [Lotus japonicus] gi|388498868|gb|AFK37500.1| unknown [Lotus
           japonicus]
          Length = 200

 Score =  337 bits (865), Expect = 2e-90
 Identities = 170/200 (85%), Positives = 177/200 (88%)
 Frame = +2

Query: 17  MGCSSSLPDRNPTXXXXXXXXXXXXXDPKNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPT 196
           MGC SSLPDR+               D KNL+VKLVLLGDSGVGKSCIVLRFVRGQFDPT
Sbjct: 1   MGCGSSLPDRDSRPFGRDNPENGGGQDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT 60

Query: 197 SKVTVGASFLSQTIALQDSTTIKFEIWDTAGQERYAALAPLYYRGAAVAVIAYDITSPDT 376
           SKVTVGASFLSQTIALQDSTT+KFEIWDTAGQERYAALAPLYYRGAAVAVI YDITSP++
Sbjct: 61  SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPES 120

Query: 377 FSKAQYWVKELQKHGNPDIVMALVGNKADLQEKREVPTQDGIDYAEKNGMFFIETSAKTA 556
           FSKAQYWVKELQKHGNPDIVMALVGNKADL EKREV  QDGIDYAEKNGMFFIETSAKTA
Sbjct: 121 FSKAQYWVKELQKHGNPDIVMALVGNKADLLEKREVAVQDGIDYAEKNGMFFIETSAKTA 180

Query: 557 DNINQLFEEIAKRIPRPSLT 616
           DNIN+LFEEIAKR+PRP  T
Sbjct: 181 DNINELFEEIAKRLPRPPTT 200


>gb|ABC59814.1| small GTPase Rab5b [Nicotiana tabacum]
          Length = 200

 Score =  335 bits (860), Expect = 7e-90
 Identities = 168/198 (84%), Positives = 178/198 (89%)
 Frame = +2

Query: 17  MGCSSSLPDRNPTXXXXXXXXXXXXXDPKNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPT 196
           MGC+SS+ DRN               DPKNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPT
Sbjct: 1   MGCASSVADRNSGRAAGLNPDNGGAVDPKNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPT 60

Query: 197 SKVTVGASFLSQTIALQDSTTIKFEIWDTAGQERYAALAPLYYRGAAVAVIAYDITSPDT 376
           SKVTVGASFLSQTIALQDSTT+KFEIWDTAGQERYAALAPLYYRGAAVAV+ YDITSP++
Sbjct: 61  SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITSPES 120

Query: 377 FSKAQYWVKELQKHGNPDIVMALVGNKADLQEKREVPTQDGIDYAEKNGMFFIETSAKTA 556
           F+KAQYWVKELQKHG+PDIVMALVGNKADL EKREV TQDGID AEKNGMFFIETSAKTA
Sbjct: 121 FAKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVTTQDGIDCAEKNGMFFIETSAKTA 180

Query: 557 DNINQLFEEIAKRIPRPS 610
           DNINQLFEEIAKR+PRP+
Sbjct: 181 DNINQLFEEIAKRLPRPA 198


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