BLASTX nr result

ID: Lithospermum22_contig00010337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00010337
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containi...   105   3e-21
emb|CBI17228.3| unnamed protein product [Vitis vinifera]              105   3e-21
ref|XP_002300166.1| predicted protein [Populus trichocarpa] gi|2...   104   6e-21
ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containi...   100   9e-20
ref|NP_171976.1| pentatricopeptide repeat-containing protein [Ar...   100   9e-20

>ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Vitis vinifera]
          Length = 677

 Score =  105 bits (263), Expect = 3e-21
 Identities = 45/54 (83%), Positives = 51/54 (94%)
 Frame = -2

Query: 337 PGVTIRIVKNLRVCGDCHSLIKYASKMSQREIILRDIKRFHHFRDGKCTCQDYW 176
           PG TIRIVKNLRVCGDCHS++KYASK+S+REIILRDIKRFHHF+DG C+C DYW
Sbjct: 624 PGSTIRIVKNLRVCGDCHSMMKYASKLSRREIILRDIKRFHHFKDGTCSCGDYW 677


>emb|CBI17228.3| unnamed protein product [Vitis vinifera]
          Length = 590

 Score =  105 bits (263), Expect = 3e-21
 Identities = 45/54 (83%), Positives = 51/54 (94%)
 Frame = -2

Query: 337 PGVTIRIVKNLRVCGDCHSLIKYASKMSQREIILRDIKRFHHFRDGKCTCQDYW 176
           PG TIRIVKNLRVCGDCHS++KYASK+S+REIILRDIKRFHHF+DG C+C DYW
Sbjct: 537 PGSTIRIVKNLRVCGDCHSMMKYASKLSRREIILRDIKRFHHFKDGTCSCGDYW 590


>ref|XP_002300166.1| predicted protein [Populus trichocarpa] gi|222847424|gb|EEE84971.1|
           predicted protein [Populus trichocarpa]
          Length = 719

 Score =  104 bits (260), Expect = 6e-21
 Identities = 43/54 (79%), Positives = 53/54 (98%)
 Frame = -2

Query: 337 PGVTIRIVKNLRVCGDCHSLIKYASKMSQREIILRDIKRFHHFRDGKCTCQDYW 176
           PG+TIRIVKNL+VCGDCHSL+KYASK+SQREI+LRD+KRFHHF+DG C+C+D+W
Sbjct: 666 PGMTIRIVKNLQVCGDCHSLMKYASKISQREIMLRDMKRFHHFKDGSCSCRDHW 719


>ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Cucumis sativus]
           gi|449505311|ref|XP_004162432.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g04840-like [Cucumis sativus]
          Length = 679

 Score =  100 bits (250), Expect = 9e-20
 Identities = 43/54 (79%), Positives = 48/54 (88%)
 Frame = -2

Query: 337 PGVTIRIVKNLRVCGDCHSLIKYASKMSQREIILRDIKRFHHFRDGKCTCQDYW 176
           PG T+RIVKNLRVC DCHS +KYASKMS+REIILRD+KRFHHF DG C+C DYW
Sbjct: 626 PGTTVRIVKNLRVCVDCHSFMKYASKMSKREIILRDMKRFHHFNDGVCSCGDYW 679


>ref|NP_171976.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75192500|sp|Q9MAT2.1|PPR10_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g04840 gi|7211995|gb|AAF40466.1|AC004809_24 F13M7.17
           [Arabidopsis thaliana] gi|332189629|gb|AEE27750.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 665

 Score =  100 bits (250), Expect = 9e-20
 Identities = 39/54 (72%), Positives = 50/54 (92%)
 Frame = -2

Query: 337 PGVTIRIVKNLRVCGDCHSLIKYASKMSQREIILRDIKRFHHFRDGKCTCQDYW 176
           PG TIRI+KNLR+CGDCHSL+KY SK+SQR+I+LRD ++FHHF+DG+C+C DYW
Sbjct: 612 PGTTIRIIKNLRICGDCHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665


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