BLASTX nr result
ID: Lithospermum22_contig00010332
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00010332
(1132 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI15662.3| unnamed protein product [Vitis vinifera] 350 4e-94
ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containi... 350 4e-94
emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera] 349 8e-94
ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containi... 348 2e-93
ref|XP_002511191.1| pentatricopeptide repeat-containing protein,... 338 2e-90
>emb|CBI15662.3| unnamed protein product [Vitis vinifera]
Length = 657
Score = 350 bits (898), Expect = 4e-94
Identities = 179/300 (59%), Positives = 224/300 (74%), Gaps = 7/300 (2%)
Frame = +3
Query: 252 KSNGSSLWLKREKKQYNTFYAVKFSSIDQVLLARPPRPVPKTET-KKNFPEYTQVGN--- 419
KS L +K+ F ++ SS++Q L PRP PK T + N + QV
Sbjct: 35 KSFSQRLLPFNRRKRRTPFSQIRCSSLEQGL---QPRPKPKPSTIELNVGKEAQVNETQL 91
Query: 420 ---SGSICGQVEKLVLHKKYREALELFEILECEVGFELDSSTYDALISACIGLKSIRGVK 590
S +CGQ+EKLV K+Y EALELFEILE +++DS TYDAL+SACIGLKSIRGVK
Sbjct: 92 RKPSSELCGQIEKLVFFKRYHEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVK 151
Query: 591 RVFGWILDSGFELDLYMKNRVLLMHVKCGMMIDARMLFDDLPERNIVSWNIIISGLVESG 770
+VF ++++SG + D Y++NRVLLMHVKCGMMIDAR LFD++PE+NI+SWN II GLV++G
Sbjct: 152 KVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAG 211
Query: 771 DYLGAFRLFLEMWEEFDNLGSRTFAIMIRASAGLELISPGMQLHSCALKLGLCDNVYVSC 950
DY AFRLFL MW++F + GSR F MIRASAGL LI G QLHSC+LK G+ +V+V+C
Sbjct: 212 DYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVAC 271
Query: 951 ALIDMYSKCGRIDDGRIVFDMMHEKSTVGWNSIIAGYALHGYSEEALNLYNAMQNSGVKM 1130
ALIDMYSKCG I+D + VFD M EK+TVGWNSIIAGYALHGYSEEAL++Y M++SGVK+
Sbjct: 272 ALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKI 331
Score = 127 bits (318), Expect = 7e-27
Identities = 72/219 (32%), Positives = 121/219 (55%)
Frame = +3
Query: 468 YREALELFEILECEVGFELDSSTYDALISACIGLKSIRGVKRVFGWILDSGFELDLYMKN 647
Y EA LF ++ + + S + +I A GL I +++ L +G D+++
Sbjct: 213 YFEAFRLFLMMWQDFS-DAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVAC 271
Query: 648 RVLLMHVKCGMMIDARMLFDDLPERNIVSWNIIISGLVESGDYLGAFRLFLEMWEEFDNL 827
++ M+ KCG + DA+ +FD +PE+ V WN II+G G A ++ EM + +
Sbjct: 272 ALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKI 331
Query: 828 GSRTFAIMIRASAGLELISPGMQLHSCALKLGLCDNVYVSCALIDMYSKCGRIDDGRIVF 1007
+ TF+I+IR A L + Q H+ ++ G ++ + AL+D+YSK GRI+D + VF
Sbjct: 332 DNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVF 391
Query: 1008 DMMHEKSTVGWNSIIAGYALHGYSEEALNLYNAMQNSGV 1124
DMM K+ + WN++IAGY HG EA+ ++ M + G+
Sbjct: 392 DMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGM 430
>ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Vitis vinifera]
Length = 704
Score = 350 bits (898), Expect = 4e-94
Identities = 179/300 (59%), Positives = 224/300 (74%), Gaps = 7/300 (2%)
Frame = +3
Query: 252 KSNGSSLWLKREKKQYNTFYAVKFSSIDQVLLARPPRPVPKTET-KKNFPEYTQVGN--- 419
KS L +K+ F ++ SS++Q L PRP PK T + N + QV
Sbjct: 35 KSFSQRLLPFNRRKRRTPFSQIRCSSLEQGL---QPRPKPKPSTIELNVGKEAQVNETQL 91
Query: 420 ---SGSICGQVEKLVLHKKYREALELFEILECEVGFELDSSTYDALISACIGLKSIRGVK 590
S +CGQ+EKLV K+Y EALELFEILE +++DS TYDAL+SACIGLKSIRGVK
Sbjct: 92 RKPSSELCGQIEKLVFFKRYHEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVK 151
Query: 591 RVFGWILDSGFELDLYMKNRVLLMHVKCGMMIDARMLFDDLPERNIVSWNIIISGLVESG 770
+VF ++++SG + D Y++NRVLLMHVKCGMMIDAR LFD++PE+NI+SWN II GLV++G
Sbjct: 152 KVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAG 211
Query: 771 DYLGAFRLFLEMWEEFDNLGSRTFAIMIRASAGLELISPGMQLHSCALKLGLCDNVYVSC 950
DY AFRLFL MW++F + GSR F MIRASAGL LI G QLHSC+LK G+ +V+V+C
Sbjct: 212 DYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVAC 271
Query: 951 ALIDMYSKCGRIDDGRIVFDMMHEKSTVGWNSIIAGYALHGYSEEALNLYNAMQNSGVKM 1130
ALIDMYSKCG I+D + VFD M EK+TVGWNSIIAGYALHGYSEEAL++Y M++SGVK+
Sbjct: 272 ALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKI 331
Score = 127 bits (318), Expect = 7e-27
Identities = 72/219 (32%), Positives = 121/219 (55%)
Frame = +3
Query: 468 YREALELFEILECEVGFELDSSTYDALISACIGLKSIRGVKRVFGWILDSGFELDLYMKN 647
Y EA LF ++ + + S + +I A GL I +++ L +G D+++
Sbjct: 213 YFEAFRLFLMMWQDFS-DAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVAC 271
Query: 648 RVLLMHVKCGMMIDARMLFDDLPERNIVSWNIIISGLVESGDYLGAFRLFLEMWEEFDNL 827
++ M+ KCG + DA+ +FD +PE+ V WN II+G G A ++ EM + +
Sbjct: 272 ALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKI 331
Query: 828 GSRTFAIMIRASAGLELISPGMQLHSCALKLGLCDNVYVSCALIDMYSKCGRIDDGRIVF 1007
+ TF+I+IR A L + Q H+ ++ G ++ + AL+D+YSK GRI+D + VF
Sbjct: 332 DNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVF 391
Query: 1008 DMMHEKSTVGWNSIIAGYALHGYSEEALNLYNAMQNSGV 1124
DMM K+ + WN++IAGY HG EA+ ++ M + G+
Sbjct: 392 DMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGM 430
>emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
Length = 704
Score = 349 bits (895), Expect = 8e-94
Identities = 179/300 (59%), Positives = 223/300 (74%), Gaps = 7/300 (2%)
Frame = +3
Query: 252 KSNGSSLWLKREKKQYNTFYAVKFSSIDQVLLARPPRPVPKTET-KKNFPEYTQVGN--- 419
KS L +K+ F ++ SS++Q L PRP PK T + N + QV
Sbjct: 35 KSFSQRLLPFNRRKRRTPFSQIRCSSLEQGL---QPRPKPKPSTIELNVGKEAQVNETQL 91
Query: 420 ---SGSICGQVEKLVLHKKYREALELFEILECEVGFELDSSTYDALISACIGLKSIRGVK 590
S +CGQ+EKLV K+Y EALELFEILE +++DS TYDAL+SACIGLKSIRGVK
Sbjct: 92 RKPSSELCGQIEKLVFFKRYHEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVK 151
Query: 591 RVFGWILDSGFELDLYMKNRVLLMHVKCGMMIDARMLFDDLPERNIVSWNIIISGLVESG 770
+VF ++++SG + D Y++NRVLLMHVKCGMMIDAR LFD++PE+NI+SWN II GLV++G
Sbjct: 152 KVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAG 211
Query: 771 DYLGAFRLFLEMWEEFDNLGSRTFAIMIRASAGLELISPGMQLHSCALKLGLCDNVYVSC 950
DY AFRLFL MW+ F + GSR F MIRASAGL LI G QLHSC+LK G+ +V+V+C
Sbjct: 212 DYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVAC 271
Query: 951 ALIDMYSKCGRIDDGRIVFDMMHEKSTVGWNSIIAGYALHGYSEEALNLYNAMQNSGVKM 1130
ALIDMYSKCG I+D + VFD M EK+TVGWNSIIAGYALHGYSEEAL++Y M++SGVK+
Sbjct: 272 ALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKI 331
Score = 127 bits (319), Expect = 5e-27
Identities = 72/219 (32%), Positives = 121/219 (55%)
Frame = +3
Query: 468 YREALELFEILECEVGFELDSSTYDALISACIGLKSIRGVKRVFGWILDSGFELDLYMKN 647
Y EA LF ++ + + S + +I A GL I +++ L +G D+++
Sbjct: 213 YFEAFRLF-LMMWQXFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVAC 271
Query: 648 RVLLMHVKCGMMIDARMLFDDLPERNIVSWNIIISGLVESGDYLGAFRLFLEMWEEFDNL 827
++ M+ KCG + DA+ +FD +PE+ V WN II+G G A ++ EM + +
Sbjct: 272 ALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKI 331
Query: 828 GSRTFAIMIRASAGLELISPGMQLHSCALKLGLCDNVYVSCALIDMYSKCGRIDDGRIVF 1007
+ TF+I+IR A L + Q H+ ++ G ++ + AL+D+YSK GRI+D + VF
Sbjct: 332 DNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVF 391
Query: 1008 DMMHEKSTVGWNSIIAGYALHGYSEEALNLYNAMQNSGV 1124
DMM K+ + WN++IAGY HG EA+ ++ M + G+
Sbjct: 392 DMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGM 430
>ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
gi|449517215|ref|XP_004165641.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 348 bits (892), Expect = 2e-93
Identities = 192/333 (57%), Positives = 241/333 (72%), Gaps = 18/333 (5%)
Frame = +3
Query: 186 MDISLPLD---HHLHSRCRF---AYISTKSNGSSLWLKRE-----KKQYNTFYAVKFSSI 332
M++ LPL ++++ R + ++ S + + S L+ K +K N+F +K SS
Sbjct: 1 MNMELPLSRYQNYVYDRLQCNSTSFFSLRYSDSDLFTKTSFLSNPRKYRNSFCWIKCSSF 60
Query: 333 DQVLLARPPRPVPKTET-----KKNFP-EYTQVGNSG-SICGQVEKLVLHKKYREALELF 491
+Q L RP RP PK +K P + T V S IC Q+EKLVL KKYR+ALE+F
Sbjct: 61 EQGLRPRP-RPQPKPSKLDVGDRKETPLKETHVKKSSVGICSQIEKLVLCKKYRDALEMF 119
Query: 492 EILECEVGFELDSSTYDALISACIGLKSIRGVKRVFGWILDSGFELDLYMKNRVLLMHVK 671
EI E E GF + STYDALI+ACIGLKSIRGVKR+ +++D+GFE D YM+NRVLLMHVK
Sbjct: 120 EIFELEDGFHVGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRVLLMHVK 179
Query: 672 CGMMIDARMLFDDLPERNIVSWNIIISGLVESGDYLGAFRLFLEMWEEFDNLGSRTFAIM 851
CGMMIDA LFD++P RN VSW IISG V+SG+Y+ AFRLF+ M EEF + G RTFA M
Sbjct: 180 CGMMIDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATM 239
Query: 852 IRASAGLELISPGMQLHSCALKLGLCDNVYVSCALIDMYSKCGRIDDGRIVFDMMHEKST 1031
IRASAGLE+I PG QLHSCA+K GL +++VSCALIDMYSKCG ++D VFD M +K+
Sbjct: 240 IRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTI 299
Query: 1032 VGWNSIIAGYALHGYSEEALNLYNAMQNSGVKM 1130
VGWNSIIAGYALHGYSEEAL+LY+ M++SGVKM
Sbjct: 300 VGWNSIIAGYALHGYSEEALDLYHEMRDSGVKM 332
Score = 135 bits (341), Expect = 1e-29
Identities = 74/219 (33%), Positives = 125/219 (57%)
Frame = +3
Query: 468 YREALELFEILECEVGFELDSSTYDALISACIGLKSIRGVKRVFGWILDSGFELDLYMKN 647
Y EA LF IL E ++ T+ +I A GL+ I +++ + +G D+++
Sbjct: 214 YVEAFRLF-ILMREEFYDCGPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSC 272
Query: 648 RVLLMHVKCGMMIDARMLFDDLPERNIVSWNIIISGLVESGDYLGAFRLFLEMWEEFDNL 827
++ M+ KCG + DA +FD++P++ IV WN II+G G A L+ EM + +
Sbjct: 273 ALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKM 332
Query: 828 GSRTFAIMIRASAGLELISPGMQLHSCALKLGLCDNVYVSCALIDMYSKCGRIDDGRIVF 1007
TF+I+IR + L ++ Q+H+ ++ G +V + AL+D YSK G++DD R VF
Sbjct: 333 DHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVF 392
Query: 1008 DMMHEKSTVGWNSIIAGYALHGYSEEALNLYNAMQNSGV 1124
D M ++ + WN++IAGY HG+ EEA++++ M G+
Sbjct: 393 DRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGM 431
Score = 71.2 bits (173), Expect = 4e-10
Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 2/231 (0%)
Frame = +3
Query: 396 PEYTQVGNSGSICGQVEKLVLHKKYREALELFEILECEVGFELDSSTYDALISACIGLKS 575
P+ T VG + I G LH EAL+L+ + + G ++D T+ +I C L S
Sbjct: 295 PDKTIVGWNSIIAGYA----LHGYSEEALDLYHEMR-DSGVKMDHFTFSIIIRICSRLAS 349
Query: 576 IRGVKRVFGWILDSGFELDLYMKNRVLLMHVKCGMMIDARMLFDDLPERNIVSWNIIISG 755
+ K+V ++ +GF LD+ ++ + K G + DAR +FD + RNI+SWN +I+G
Sbjct: 350 VARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAG 409
Query: 756 LVESGDYLGAFRLFLEMWEEFDNLGSRTFAIMIRASAGLELISPGMQL-HSCALKLGLCD 932
G A +F +M E TF ++ A + L G ++ S +
Sbjct: 410 YGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKP 469
Query: 933 NVYVSCALIDMYSKCGRIDDGRIVFDMMHEKSTVG-WNSIIAGYALHGYSE 1082
+I++ + G +D+ + + T W +++ +HG E
Sbjct: 470 RAMHFACMIELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHGNLE 520
>ref|XP_002511191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550306|gb|EEF51793.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 538
Score = 338 bits (866), Expect = 2e-90
Identities = 178/288 (61%), Positives = 212/288 (73%), Gaps = 7/288 (2%)
Frame = +3
Query: 288 KKQYNTFYAVKFSSIDQVLLARPPRPVPK-------TETKKNFPEYTQVGNSGSICGQVE 446
+K N F + S+D+ L PRP PK E NF + S IC Q+E
Sbjct: 86 RKWRNPFAINQCCSLDRGL---QPRPKPKPSKVDIDVEEGTNFKDTRIKKPSARICSQIE 142
Query: 447 KLVLHKKYREALELFEILECEVGFELDSSTYDALISACIGLKSIRGVKRVFGWILDSGFE 626
KLVLH KYREALELFEILE + GF++ SSTYDAL+SACIGL+SI GVKRV ++L +GFE
Sbjct: 143 KLVLHGKYREALELFEILELDGGFDVGSSTYDALVSACIGLRSIPGVKRVLNYMLSNGFE 202
Query: 627 LDLYMKNRVLLMHVKCGMMIDARMLFDDLPERNIVSWNIIISGLVESGDYLGAFRLFLEM 806
D YM NRVLL+ VKCGMMI AR FD++PERN+VSWN IISGLV+ GDY AFRLFL M
Sbjct: 203 PDQYMANRVLLVQVKCGMMIHARKWFDEMPERNLVSWNTIISGLVDMGDYKEAFRLFLIM 262
Query: 807 WEEFDNLGSRTFAIMIRASAGLELISPGMQLHSCALKLGLCDNVYVSCALIDMYSKCGRI 986
WEEF + GSRTFA MI+ASAGL IS G QLHSCALK+ + D+++VSCALIDMY KCG I
Sbjct: 263 WEEFSDAGSRTFATMIQASAGLGWISIGRQLHSCALKMEVGDDIFVSCALIDMYGKCGSI 322
Query: 987 DDGRIVFDMMHEKSTVGWNSIIAGYALHGYSEEALNLYNAMQNSGVKM 1130
+D VFD M E++ V WN+IIAGYALHGYSEEAL++ M+NSGV+M
Sbjct: 323 EDAHCVFDEMPERNIVAWNTIIAGYALHGYSEEALDMVYEMRNSGVRM 370
Score = 129 bits (324), Expect = 1e-27
Identities = 74/220 (33%), Positives = 119/220 (54%)
Frame = +3
Query: 468 YREALELFEILECEVGFELDSSTYDALISACIGLKSIRGVKRVFGWILDSGFELDLYMKN 647
Y+EA LF I+ E + S T+ +I A GL I +++ L D+++
Sbjct: 252 YKEAFRLFLIMWEEFS-DAGSRTFATMIQASAGLGWISIGRQLHSCALKMEVGDDIFVSC 310
Query: 648 RVLLMHVKCGMMIDARMLFDDLPERNIVSWNIIISGLVESGDYLGAFRLFLEMWEEFDNL 827
++ M+ KCG + DA +FD++PERNIV+WN II+G G A + EM +
Sbjct: 311 ALIDMYGKCGSIEDAHCVFDEMPERNIVAWNTIIAGYALHGYSEEALDMVYEMRNSGVRM 370
Query: 828 GSRTFAIMIRASAGLELISPGMQLHSCALKLGLCDNVYVSCALIDMYSKCGRIDDGRIVF 1007
TF+I++R A L ++ Q H+ L+ G ++ + AL+D YSK GR++ R VF
Sbjct: 371 DHFTFSIVVRICARLASLNYAKQAHASLLRHGFGSDIVANSALVDFYSKWGRVETARHVF 430
Query: 1008 DMMHEKSTVGWNSIIAGYALHGYSEEALNLYNAMQNSGVK 1127
D M K+ + WN++IAGY HG ++A+ L+ M ++
Sbjct: 431 DQMPCKNVISWNALIAGYGNHGKGDDAIELFEQMLQERIR 470
Score = 62.0 bits (149), Expect = 3e-07
Identities = 40/148 (27%), Positives = 70/148 (47%)
Frame = +3
Query: 456 LHKKYREALELFEILECEVGFELDSSTYDALISACIGLKSIRGVKRVFGWILDSGFELDL 635
LH EAL++ + G +D T+ ++ C L S+ K+ +L GF D+
Sbjct: 349 LHGYSEEALDMVYEMR-NSGVRMDHFTFSIVVRICARLASLNYAKQAHASLLRHGFGSDI 407
Query: 636 YMKNRVLLMHVKCGMMIDARMLFDDLPERNIVSWNIIISGLVESGDYLGAFRLFLEMWEE 815
+ ++ + K G + AR +FD +P +N++SWN +I+G G A LF +M +E
Sbjct: 408 VANSALVDFYSKWGRVETARHVFDQMPCKNVISWNALIAGYGNHGKGDDAIELFEQMLQE 467
Query: 816 FDNLGSRTFAIMIRASAGLELISPGMQL 899
TF ++ A + L G ++
Sbjct: 468 RIRPNHVTFLAVLSACSYSGLSEHGWEI 495