BLASTX nr result
ID: Lithospermum22_contig00010312
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00010312 (1585 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAR64523.1| nuclear RNA binding protein [Solanum tuberosum] 86 2e-25 ref|XP_002511578.1| RNA binding protein, putative [Ricinus commu... 74 1e-21 ref|XP_002272562.2| PREDICTED: uncharacterized protein LOC100259... 69 2e-21 emb|CBI16673.3| unnamed protein product [Vitis vinifera] 69 2e-21 ref|XP_002327032.1| predicted protein [Populus trichocarpa] gi|2... 84 3e-18 >emb|CAR64523.1| nuclear RNA binding protein [Solanum tuberosum] Length = 360 Score = 85.5 bits (210), Expect(2) = 2e-25 Identities = 50/117 (42%), Positives = 66/117 (56%) Frame = -3 Query: 827 NNVTREXXXXXXXXXXXXGLALVIEEGVDEGEKDLKHKNPSVKEFTTDAKEGTPADDAGX 648 N + RE + + E DEGEK+L + PS +E D K+ PA +A Sbjct: 166 NEIKREGAGRGNWGTEADEVTQMTGEVADEGEKNLNVEKPSTEEEAGDDKKENPAAEAED 225 Query: 647 XXXXXXXXXXXXXXKVLEEKRKALQALRTEERKVDTQVFHSMQPLNKKSSDDIFIQL 477 K+LEEKRKALQAL+TEERKVDT+VF SMQ ++KK SD+IF++L Sbjct: 226 KEPEDKEMTLEEYEKLLEEKRKALQALKTEERKVDTKVFESMQQISKKPSDEIFVKL 282 Score = 58.5 bits (140), Expect(2) = 2e-25 Identities = 55/168 (32%), Positives = 68/168 (40%), Gaps = 12/168 (7%) Frame = -2 Query: 1371 MADMNPFDLLGDDELTEDPSQLIA--------AKKVSXXXXXXXXXXXXXXXXXXXA--- 1225 MAD+NPFDLLGDD+ +DPS+LIA AK+ S Sbjct: 1 MADLNPFDLLGDDD-NDDPSKLIAIHQQKVDPAKRASAPAAAAAKKQPAKLPTKPPPPTQ 59 Query: 1224 -VREAKPEPGQNTXXXXXXXXXXXXXXXXXFNREPANEENAPRNREFSGLQGAGPGIDAX 1048 VREAK E G+ FNRE +N EN RNREFSG A P Sbjct: 60 AVREAKTEFGRG-GGRGGGRGYSRGRGGGGFNREASNNENFSRNREFSG-GIAAPEYMEG 117 Query: 1047 XXXXXXXXXXXXXXXXXXXXXXXFAHGDLSDGERPRRVFDRHSGFSHG 904 F + ++ +G+RPRR F+R SG G Sbjct: 118 GRPSERRGGYGGPHAFRGGRPGGFGNEEMPEGDRPRRTFERRSGTGRG 165 >ref|XP_002511578.1| RNA binding protein, putative [Ricinus communis] gi|223548758|gb|EEF50247.1| RNA binding protein, putative [Ricinus communis] Length = 295 Score = 74.3 bits (181), Expect(2) = 1e-21 Identities = 48/118 (40%), Positives = 62/118 (52%), Gaps = 1/118 (0%) Frame = -3 Query: 827 NNVTREXXXXXXXXXXXXGLALVIEEGVDEGEKDLKHKNPSVKEFTTDAKEGTPADDAGX 648 N RE +A V EE V+EGEK++ + P + D K+ +P ++ Sbjct: 171 NEFKREGAGRGNWGTNTDEIAQVTEEAVNEGEKNMGDEKPVGEGEAVDGKKESPTNEPEE 230 Query: 647 XXXXXXXXXXXXXXKVLEEKRKALQALRTEERKVDTQVFHSMQPL-NKKSSDDIFIQL 477 KVLEEKRKALQA + EERKVDT+ F SMQ L +KK DDIFI+L Sbjct: 231 KQPEDKEMTLEEYEKVLEEKRKALQATKAEERKVDTKEFASMQQLSSKKGGDDIFIKL 288 Score = 56.6 bits (135), Expect(2) = 1e-21 Identities = 54/174 (31%), Positives = 66/174 (37%), Gaps = 18/174 (10%) Frame = -2 Query: 1371 MADMNPFDLLGDDELTEDPSQLIAA------------------KKVSXXXXXXXXXXXXX 1246 MA MNPFDLLGDD+ EDPSQLIAA + + Sbjct: 1 MATMNPFDLLGDDD-AEDPSQLIAAAAAVPKKAQSQPLAKQQPQSLPQAKQQQPAKLPSK 59 Query: 1245 XXXXXXAVREAKPEPGQNTXXXXXXXXXXXXXXXXXFNREPANEENAPRNREFSGLQGAG 1066 AVREA+ E G ++RE +N EN+ N QGA Sbjct: 60 PLPPSQAVREARNEGGHG--GGRGAGGRGYGRGRGAYSRESSNNENSFSNTGAPAGQGAP 117 Query: 1065 PGIDAXXXXXXXXXXXXXXXXXXXXXXXXFAHGDLSDGERPRRVFDRHSGFSHG 904 DA A+G++ DGERPRR F+R SG HG Sbjct: 118 EDGDAGKTSERRSYGGARGGYRGGRRGGF-ANGEVGDGERPRRAFERRSGTGHG 170 >ref|XP_002272562.2| PREDICTED: uncharacterized protein LOC100259885 [Vitis vinifera] Length = 370 Score = 68.9 bits (167), Expect(2) = 2e-21 Identities = 48/119 (40%), Positives = 63/119 (52%), Gaps = 2/119 (1%) Frame = -3 Query: 827 NNVTREXXXXXXXXXXXXGLALVIEEGVDEGEKDLKHKNPSVKEFTTDAKEGTPADDAGX 648 N + RE L+ V EE V+EGEK+L + P +E D + P ++ Sbjct: 164 NELKREGSGRGNWGTETDELSGVTEEVVNEGEKNLGAEKPVGEEDVADGNKENPVNEPEE 223 Query: 647 XXXXXXXXXXXXXXKVLEEKRKALQALRTEERKVDT-QVFHSMQPL-NKKSSDDIFIQL 477 KVLEE+RKALQ L+TEERKVD + F SMQ L +KK +DDIFI+L Sbjct: 224 KEPEEKEMTLEEYEKVLEERRKALQTLKTEERKVDVDKEFKSMQQLSSKKGNDDIFIKL 282 Score = 61.2 bits (147), Expect(2) = 2e-21 Identities = 55/168 (32%), Positives = 69/168 (41%), Gaps = 12/168 (7%) Frame = -2 Query: 1371 MADMNPFDLLGDDELTEDPSQLIAAKKV------------SXXXXXXXXXXXXXXXXXXX 1228 MA MNPFDLLGDD+ +EDPSQLIAA+K+ + Sbjct: 1 MATMNPFDLLGDDD-SEDPSQLIAAQKIVPKKALAPTQAAAPAQQAKPAKLPSKPVPPAQ 59 Query: 1227 AVREAKPEPGQNTXXXXXXXXXXXXXXXXXFNREPANEENAPRNREFSGLQGAGPGIDAX 1048 AVRE K E G+ FNR+ AN EN+ N +G QGA D Sbjct: 60 AVREGKNESGRG--GGRGGRGYGRGRGGGGFNRDYANNENSFSNMGVAGGQGAPE--DGE 115 Query: 1047 XXXXXXXXXXXXXXXXXXXXXXXFAHGDLSDGERPRRVFDRHSGFSHG 904 F++G+ DG+RPRR F+R SG G Sbjct: 116 GGKPSERRNYGGPRPPFRGRRGGFSNGEAGDGDRPRRAFERRSGTGRG 163 >emb|CBI16673.3| unnamed protein product [Vitis vinifera] Length = 361 Score = 68.9 bits (167), Expect(2) = 2e-21 Identities = 48/119 (40%), Positives = 63/119 (52%), Gaps = 2/119 (1%) Frame = -3 Query: 827 NNVTREXXXXXXXXXXXXGLALVIEEGVDEGEKDLKHKNPSVKEFTTDAKEGTPADDAGX 648 N + RE L+ V EE V+EGEK+L + P +E D + P ++ Sbjct: 164 NELKREGSGRGNWGTETDELSGVTEEVVNEGEKNLGAEKPVGEEDVADGNKENPVNEPEE 223 Query: 647 XXXXXXXXXXXXXXKVLEEKRKALQALRTEERKVDT-QVFHSMQPL-NKKSSDDIFIQL 477 KVLEE+RKALQ L+TEERKVD + F SMQ L +KK +DDIFI+L Sbjct: 224 KEPEEKEMTLEEYEKVLEERRKALQTLKTEERKVDVDKEFKSMQQLSSKKGNDDIFIKL 282 Score = 61.2 bits (147), Expect(2) = 2e-21 Identities = 55/168 (32%), Positives = 69/168 (41%), Gaps = 12/168 (7%) Frame = -2 Query: 1371 MADMNPFDLLGDDELTEDPSQLIAAKKV------------SXXXXXXXXXXXXXXXXXXX 1228 MA MNPFDLLGDD+ +EDPSQLIAA+K+ + Sbjct: 1 MATMNPFDLLGDDD-SEDPSQLIAAQKIVPKKALAPTQAAAPAQQAKPAKLPSKPVPPAQ 59 Query: 1227 AVREAKPEPGQNTXXXXXXXXXXXXXXXXXFNREPANEENAPRNREFSGLQGAGPGIDAX 1048 AVRE K E G+ FNR+ AN EN+ N +G QGA D Sbjct: 60 AVREGKNESGRG--GGRGGRGYGRGRGGGGFNRDYANNENSFSNMGVAGGQGAPE--DGE 115 Query: 1047 XXXXXXXXXXXXXXXXXXXXXXXFAHGDLSDGERPRRVFDRHSGFSHG 904 F++G+ DG+RPRR F+R SG G Sbjct: 116 GGKPSERRNYGGPRPPFRGRRGGFSNGEAGDGDRPRRAFERRSGTGRG 163 >ref|XP_002327032.1| predicted protein [Populus trichocarpa] gi|222835347|gb|EEE73782.1| predicted protein [Populus trichocarpa] Length = 373 Score = 84.0 bits (206), Expect(2) = 3e-18 Identities = 54/118 (45%), Positives = 67/118 (56%), Gaps = 1/118 (0%) Frame = -3 Query: 827 NNVTREXXXXXXXXXXXXGLALVIEEGVDEGEKDLKHKNPSVKEFTTDAKEGTPADDAGX 648 N + RE LALV EE +EGEK+L P V+E D K+ PA++ Sbjct: 169 NEMKREGSGRGNWGTPTDELALVTEEAANEGEKNLGDDKP-VEEAAADRKKENPANEPEE 227 Query: 647 XXXXXXXXXXXXXXKVLEEKRKALQALRTEERKVDTQVFHSMQPL-NKKSSDDIFIQL 477 KVLEEKRKALQAL+TEERKVDT+ F SMQ L NKK ++D+FI+L Sbjct: 228 KEPEDKVMTLEEYEKVLEEKRKALQALKTEERKVDTKEFQSMQQLSNKKENNDVFIKL 285 Score = 35.8 bits (81), Expect(2) = 3e-18 Identities = 45/171 (26%), Positives = 59/171 (34%), Gaps = 15/171 (8%) Frame = -2 Query: 1371 MADMNPFDLLGDDELTEDPSQLIAAKKV---------------SXXXXXXXXXXXXXXXX 1237 MA +NPFDLL DD EDPS + A K V + Sbjct: 1 MAMINPFDLLVDD--AEDPSLIAALKPVVSPPAAAAAKKGPAQTQPKPAPAAKLPSKPLP 58 Query: 1236 XXXAVREAKPEPGQNTXXXXXXXXXXXXXXXXXFNREPANEENAPRNREFSGLQGAGPGI 1057 AVREAK E G+ +NR+ N E++ N +QGA Sbjct: 59 PSQAVREAKTEGGRG-GGRGGGGGRGYGRGRGGYNRDFNNNESSFGNSGAPTVQGAAEDG 117 Query: 1056 DAXXXXXXXXXXXXXXXXXXXXXXXXFAHGDLSDGERPRRVFDRHSGFSHG 904 D F + ++ +GERPRR +R SG G Sbjct: 118 DTAKTFESRGYGGPRGGGFRGGRRGGFGNEEVGEGERPRRTNERWSGTGRG 168