BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00010293
         (1401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]            108   3e-21
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...   106   1e-20
dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t...   102   2e-19
emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]   102   2e-19
gb|ACB45089.1| putative polyprotein [Solanum habrochaites]            102   3e-19

>gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]
          Length = 1428

 Score =  108 bits (271), Expect = 3e-21
 Identities = 56/138 (40%), Positives = 82/138 (59%), Gaps = 5/138 (3%)
 Frame = -2

Query: 416 DSRVWHFRLGDYSPIVNVQVLGDIDCSSMDS-----CMICPLSK*QRLSFHISQFQSAEL 252
           D+ +WH RLG   P   +  L  ID SS        C +CPL+K  RL+F +S  +++ +
Sbjct: 500 DTEIWHRRLGH--PSQQILKLLKIDSSSKGDGIPAHCPVCPLAKQTRLTFPVSTTRTSMM 557

Query: 251 FELVPIDVWGPYKLPNRLGSMSFITIVEDHSRTTWTFMIPSKAHTIQIVKYFCQMFQT*F 72
           F++V +D+WGPYK P       F+TIV+D+SR  W  ++  K+ TI  +K F  M  T F
Sbjct: 558 FDVVHMDLWGPYKTPTLNRKHYFLTIVDDYSRFVWVHLLQLKSETIVAIKNFFSMINTQF 617

Query: 71  NKSVKTIRTDNGGEFINN 18
           N  VK +R+DNG EF+N+
Sbjct: 618 NSHVKVVRSDNGTEFLNS 635


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score =  106 bits (265), Expect = 1e-20
 Identities = 61/151 (40%), Positives = 88/151 (58%), Gaps = 5/151 (3%)
 Frame = -2

Query: 461 VIAKLVVNNINNNASDSRVWHFRLGDYSPIVNVQVLGDIDCSS-----MDSCMICPLSK* 297
           V+A  V    ++ A    +WH RLG  S  V +  L + + SS     +DSC  C  SK 
Sbjct: 483 VLAPRVHKASSDFAISGDLWHRRLGHPSTSVLLS-LPECNRSSQGFDKIDSCDTCFRSKQ 541

Query: 296 QRLSFHISQFQSAELFELVPIDVWGPYKLPNRLGSMSFITIVEDHSRTTWTFMIPSKAHT 117
            R  F IS  ++ E F L+  DVWGPY+ P+  G++ F+T+V+D+SR+ WT+++ SK   
Sbjct: 542 TREVFPISNNKTMECFSLIHGDVWGPYRTPSTTGAVYFLTLVDDYSRSVWTYLMSSKTEV 601

Query: 116 IQIVKYFCQMFQT*FNKSVKTIRTDNGGEFI 24
            Q++K FC M +  F K VK  RTDNG EF+
Sbjct: 602 SQLIKNFCAMSERQFGKQVKAFRTDNGTEFM 632


>dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1098

 Score =  102 bits (254), Expect = 2e-19
 Identities = 55/144 (38%), Positives = 81/144 (56%), Gaps = 4/144 (2%)
 Frame = -2

Query: 443 VNNINNNASDSRVWHFRLGDYSPIVNVQ----VLGDIDCSSMDSCMICPLSK*QRLSFHI 276
           VN     +S + +WH RLG  S  V +          D   + SC IC  +K  R  F  
Sbjct: 492 VNKGFKESSSATLWHHRLGHPSTGVLLSFPEFASSSSDLEIIKSCDICYRAKQAREVFSP 551

Query: 275 SQFQSAELFELVPIDVWGPYKLPNRLGSMSFITIVEDHSRTTWTFMIPSKAHTIQIVKYF 96
           S  ++   FEL+  DVWGPY+ P   GS+ F+TIV+D SR+ WTF++  K+   ++++ F
Sbjct: 552 SLNKTTVCFELIHCDVWGPYRTPASCGSVYFLTIVDDFSRSVWTFLMAEKSEVSRLIRNF 611

Query: 95  CQMFQT*FNKSVKTIRTDNGGEFI 24
           C M +  F KS+KT+ +DNG EF+
Sbjct: 612 CAMSERQFCKSIKTVHSDNGTEFM 635


>emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]
          Length = 1059

 Score =  102 bits (254), Expect = 2e-19
 Identities = 53/136 (38%), Positives = 77/136 (56%), Gaps = 3/136 (2%)
 Frame = -2

Query: 419 SDSRVWHFRLGDYSPI---VNVQVLGDIDCSSMDSCMICPLSK*QRLSFHISQFQSAELF 249
           S + +WH RLG  S        + L +    S ++C +C L+K +RL F +S   S   F
Sbjct: 512 SSTALWHXRLGHLSSSRLDFMAKHLLNFPFQSNNACDVCXLAKQRRLPFSVSSISSVRPF 571

Query: 248 ELVPIDVWGPYKLPNRLGSMSFITIVEDHSRTTWTFMIPSKAHTIQIVKYFCQMFQT*FN 69
           EL+  D WGPYK+ +  G+  F+TIV+D+SR TW F +  K+ T  ++  F    QT F+
Sbjct: 572 ELIHCDXWGPYKIASLSGAKXFLTIVDDYSRFTWVFFMHHKSETQHLLVKFFSFVQTQFH 631

Query: 68  KSVKTIRTDNGGEFIN 21
            S+  IR DNGGEF +
Sbjct: 632 VSIANIRVDNGGEFFS 647


>gb|ACB45089.1| putative polyprotein [Solanum habrochaites]
          Length = 849

 Score =  102 bits (253), Expect = 3e-19
 Identities = 52/136 (38%), Positives = 78/136 (57%), Gaps = 2/136 (1%)
 Frame = -2

Query: 416 DSRVWHFRLGD--YSPIVNVQVLGDIDCSSMDSCMICPLSK*QRLSFHISQFQSAELFEL 243
           D  +WH RLG   +  +  +Q+      S + SC ICPL+K  RL F  S  ++  +F+L
Sbjct: 263 DVDLWHRRLGHIPHKVLQQMQIPHISSSSKLTSCPICPLAKQTRLPFPQSPTRADNVFDL 322

Query: 242 VPIDVWGPYKLPNRLGSMSFITIVEDHSRTTWTFMIPSKAHTIQIVKYFCQMFQT*FNKS 63
           +  DVWGPYK P   G+  F+T+V+D SR  W F++  K+    ++K F Q+ Q  F   
Sbjct: 323 IHADVWGPYKFPTHDGNRYFLTLVDDCSRMIWIFLLKYKSDVFIVLKDFLQLIQRQFGGY 382

Query: 62  VKTIRTDNGGEFINNN 15
           +K  R+DNG EF N++
Sbjct: 383 IKIFRSDNGTEFFNSH 398