BLASTX nr result

ID: Lithospermum22_contig00010292 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00010292
         (1259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303703.1| predicted protein [Populus trichocarpa] gi|2...   434   e-126
ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-l...   435   e-126
emb|CBI27238.3| unnamed protein product [Vitis vinifera]              435   e-126
ref|XP_003543978.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA...   408   e-120
ref|XP_004162358.1| PREDICTED: multiple RNA-binding domain-conta...   410   e-119

>ref|XP_002303703.1| predicted protein [Populus trichocarpa] gi|222841135|gb|EEE78682.1|
            predicted protein [Populus trichocarpa]
          Length = 784

 Score =  434 bits (1117), Expect(2) = e-126
 Identities = 233/349 (66%), Positives = 268/349 (76%), Gaps = 15/349 (4%)
 Frame = -3

Query: 1257 KSDFLDNEAEDLAVRTALGETHVIAETKKALAKVGVNITSLEKFAALKSNDFKRSNHVIL 1078
            KSD LD EA+DLAVR ALGET VIAETKKAL   GVNIT+LE+ AA K +  KRSNHV+L
Sbjct: 401  KSDLLDREADDLAVRVALGETQVIAETKKALTNAGVNITALEEIAAGKKDGMKRSNHVLL 460

Query: 1077 VKNLPYGSSEIELAAMFGRFGSLDKIILPSTKTLALIIFLEPSEARAAFNGLRYKRYKDG 898
            VKNLPYGSSE+ELA  FG+FGSLDKIILP TKTLAL++FLEPSEARAAF GL YK+YK  
Sbjct: 461  VKNLPYGSSEVELAEKFGKFGSLDKIILPPTKTLALVVFLEPSEARAAFKGLAYKQYKGV 520

Query: 897  PLYLEWAPSDILAEDETS-----NRTIVGEDEVNRVRLEQEVEGLMDPYIDHDSNESMSL 733
            PLYLEWAP++IL++  TS     +   VGE +  RV LEQ VEG+ +  ID D  ES SL
Sbjct: 521  PLYLEWAPANILSQSSTSKSDEKSDAAVGEHDAKRVILEQSVEGISEMDIDPDRIESRSL 580

Query: 732  YVKNLNFKTSAESLKKHFSELVKGGKILSVRVLK----------GFGFIEFDSVGAAVTI 583
            +VKNLNFKT+ ESLKKHFSE +K G+I SVR+ K          GFGFIEFDSV  A  I
Sbjct: 581  FVKNLNFKTADESLKKHFSEHMKEGRIQSVRIKKHMKKGKNVSMGFGFIEFDSVETATNI 640

Query: 582  CRDLQGTVLDGHALILQICHANKEGKTTKKVENDKSPTKLIIRNVAFEATKKELRDMFCK 403
            CRDLQGTVLDGHALILQ+CHA K+  + KK   DKS TKL++RNVAFEAT+K+LR +F  
Sbjct: 641  CRDLQGTVLDGHALILQLCHAKKDEHSVKKAGKDKSSTKLLVRNVAFEATEKDLRQLFGP 700

Query: 402  YGQIKSLRLPKKVDNQHKGFAFVEYVTKKEAQYALQQVSHTHFRGRPLV 256
            +GQIKSLRLP K  N H+GFAFVEYVTK+EAQ ALQ +S TH  GR LV
Sbjct: 701  FGQIKSLRLPMKFGN-HRGFAFVEYVTKQEAQNALQALSSTHLYGRHLV 748



 Score = 44.3 bits (103), Expect(2) = e-126
 Identities = 22/37 (59%), Positives = 28/37 (75%)
 Frame = -1

Query: 188 VVEHAKEAECLEELRARTKAQFSEACSGLLNSARMLK 78
           V+E AKE E LEELRART AQF++  +GL N A++ K
Sbjct: 748 VLERAKEGESLEELRARTAAQFTDEQNGLQNPAKLSK 784


>ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-like [Vitis vinifera]
          Length = 983

 Score =  435 bits (1118), Expect(2) = e-126
 Identities = 232/349 (66%), Positives = 271/349 (77%), Gaps = 15/349 (4%)
 Frame = -3

Query: 1257 KSDFLDNEAEDLAVRTALGETHVIAETKKALAKVGVNITSLEKFAALKSNDFKRSNHVIL 1078
            KSD LD++A+DLAVR ALGET VIAETKKAL   GVNI SLE+F A K+   KRSNH++L
Sbjct: 585  KSDLLDSQADDLAVRIALGETQVIAETKKALINAGVNIASLEEFVAGKTEGAKRSNHILL 644

Query: 1077 VKNLPYGSSEIELAAMFGRFGSLDKIILPSTKTLALIIFLEPSEARAAFNGLRYKRYKDG 898
            VKNLPYGSSE ELA MFG++GSLDKIILP TKTLAL++FLEP+EARAAF GL YKRYKD 
Sbjct: 645  VKNLPYGSSEGELAKMFGKYGSLDKIILPPTKTLALVVFLEPAEARAAFRGLAYKRYKDA 704

Query: 897  PLYLEWAPSDILA-----EDETSNRTIVGEDEVNRVRLEQEVEGLMDPYIDHDSNESMSL 733
            PLYLEWAP +IL+     E++ S   IVGE +V R+ LEQ+VEG+ D  ID D  ES SL
Sbjct: 705  PLYLEWAPGNILSQNAPYENDASRSVIVGERDVKRMLLEQQVEGISDVDIDPDRVESRSL 764

Query: 732  YVKNLNFKTSAESLKKHFSELVKGGKILSVRVLK----------GFGFIEFDSVGAAVTI 583
            +VKNLNFKTS ESL+KHFSE +K GKI SVRV +          GFGFIEFDSV  AV +
Sbjct: 765  FVKNLNFKTSGESLRKHFSEHMKEGKIRSVRVKEHLKNGKNVSMGFGFIEFDSVETAVNV 824

Query: 582  CRDLQGTVLDGHALILQICHANKEGKTTKKVENDKSPTKLIIRNVAFEATKKELRDMFCK 403
            C +LQGTVLDGHALILQ+C A K+ +  KKV+ DKS TKLI+RNVAFEAT+K+LR +F  
Sbjct: 825  CSNLQGTVLDGHALILQLCRAKKDEQVLKKVDKDKSSTKLIVRNVAFEATEKDLRQLFSP 884

Query: 402  YGQIKSLRLPKKVDNQHKGFAFVEYVTKKEAQYALQQVSHTHFRGRPLV 256
            +GQIKSLRLP K    H+GFAFVE+VTK+EAQ ALQ +S TH  GR LV
Sbjct: 885  FGQIKSLRLPMKF-GSHRGFAFVEFVTKQEAQNALQALSSTHLYGRHLV 932



 Score = 43.5 bits (101), Expect(2) = e-126
 Identities = 23/47 (48%), Positives = 30/47 (63%)
 Frame = -1

Query: 188  VVEHAKEAECLEELRARTKAQFSEACSGLLNSARMLKKRKKLGGFDE 48
            V+E AKE E LEELRART AQF++      N  ++ +KRK +   DE
Sbjct: 932  VMERAKEGESLEELRARTAAQFTDQ-----NPTKLSRKRKHMAALDE 973


>emb|CBI27238.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  435 bits (1118), Expect(2) = e-126
 Identities = 232/349 (66%), Positives = 271/349 (77%), Gaps = 15/349 (4%)
 Frame = -3

Query: 1257 KSDFLDNEAEDLAVRTALGETHVIAETKKALAKVGVNITSLEKFAALKSNDFKRSNHVIL 1078
            KSD LD++A+DLAVR ALGET VIAETKKAL   GVNI SLE+F A K+   KRSNH++L
Sbjct: 369  KSDLLDSQADDLAVRIALGETQVIAETKKALINAGVNIASLEEFVAGKTEGAKRSNHILL 428

Query: 1077 VKNLPYGSSEIELAAMFGRFGSLDKIILPSTKTLALIIFLEPSEARAAFNGLRYKRYKDG 898
            VKNLPYGSSE ELA MFG++GSLDKIILP TKTLAL++FLEP+EARAAF GL YKRYKD 
Sbjct: 429  VKNLPYGSSEGELAKMFGKYGSLDKIILPPTKTLALVVFLEPAEARAAFRGLAYKRYKDA 488

Query: 897  PLYLEWAPSDILA-----EDETSNRTIVGEDEVNRVRLEQEVEGLMDPYIDHDSNESMSL 733
            PLYLEWAP +IL+     E++ S   IVGE +V R+ LEQ+VEG+ D  ID D  ES SL
Sbjct: 489  PLYLEWAPGNILSQNAPYENDASRSVIVGERDVKRMLLEQQVEGISDVDIDPDRVESRSL 548

Query: 732  YVKNLNFKTSAESLKKHFSELVKGGKILSVRVLK----------GFGFIEFDSVGAAVTI 583
            +VKNLNFKTS ESL+KHFSE +K GKI SVRV +          GFGFIEFDSV  AV +
Sbjct: 549  FVKNLNFKTSGESLRKHFSEHMKEGKIRSVRVKEHLKNGKNVSMGFGFIEFDSVETAVNV 608

Query: 582  CRDLQGTVLDGHALILQICHANKEGKTTKKVENDKSPTKLIIRNVAFEATKKELRDMFCK 403
            C +LQGTVLDGHALILQ+C A K+ +  KKV+ DKS TKLI+RNVAFEAT+K+LR +F  
Sbjct: 609  CSNLQGTVLDGHALILQLCRAKKDEQVLKKVDKDKSSTKLIVRNVAFEATEKDLRQLFSP 668

Query: 402  YGQIKSLRLPKKVDNQHKGFAFVEYVTKKEAQYALQQVSHTHFRGRPLV 256
            +GQIKSLRLP K    H+GFAFVE+VTK+EAQ ALQ +S TH  GR LV
Sbjct: 669  FGQIKSLRLPMKF-GSHRGFAFVEFVTKQEAQNALQALSSTHLYGRHLV 716



 Score = 43.5 bits (101), Expect(2) = e-126
 Identities = 23/47 (48%), Positives = 30/47 (63%)
 Frame = -1

Query: 188 VVEHAKEAECLEELRARTKAQFSEACSGLLNSARMLKKRKKLGGFDE 48
           V+E AKE E LEELRART AQF++      N  ++ +KRK +   DE
Sbjct: 716 VMERAKEGESLEELRARTAAQFTDQ-----NPTKLSRKRKHMAALDE 757


>ref|XP_003543978.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA-binding
            domain-containing protein 1-like [Glycine max]
          Length = 847

 Score =  408 bits (1048), Expect(2) = e-120
 Identities = 215/348 (61%), Positives = 262/348 (75%), Gaps = 14/348 (4%)
 Frame = -3

Query: 1257 KSDFLDNEAEDLAVRTALGETHVIAETKKALAKVGVNITSLEKFAALKSNDFKRSNHVIL 1078
            KSD LD EA+DLAVR ALGET VI+ETKKA    GVN+ +LE+ A  K+++ KRSNHV+L
Sbjct: 445  KSDLLDREADDLAVRIALGETQVISETKKAFKNAGVNVEALEELANNKTDELKRSNHVLL 504

Query: 1077 VKNLPYGSSEIELAAMFGRFGSLDKIILPSTKTLALIIFLEPSEARAAFNGLRYKRYKDG 898
            VKNLPYGS+E ELA MFG+FGSLDKIILP TKTLAL++FLEP EARAAF GL YKR+KD 
Sbjct: 505  VKNLPYGSTENELAKMFGKFGSLDKIILPPTKTLALVVFLEPVEARAAFRGLAYKRFKDA 564

Query: 897  PLYLEWAPSDILAEDETSNRT----IVGEDEVNRVRLEQEVEGLMDPYIDHDSNESMSLY 730
            PLYLEWAPS+IL++  TS        +GE+E  R  LEQ+VE + D  ID D  ++ SL+
Sbjct: 565  PLYLEWAPSNILSQSSTSKNNEINGAIGENEAKRQILEQQVERITDVDIDSDRVQARSLF 624

Query: 729  VKNLNFKTSAESLKKHFSELVKGGKILSVRVLK----------GFGFIEFDSVGAAVTIC 580
            VKNLNFKT  ESL+KH +E +K G ILSV+VLK          GFGF+EFDS   A  +C
Sbjct: 625  VKNLNFKTIDESLRKHLTEHMKEGSILSVKVLKHLKNGKNVSMGFGFVEFDSPETATNVC 684

Query: 579  RDLQGTVLDGHALILQICHANKEGKTTKKVENDKSPTKLIIRNVAFEATKKELRDMFCKY 400
            +DLQGTVLD HALILQ C+   +G+  K +E D+S TKL+I+NVAFEAT+K+LR +F  +
Sbjct: 685  KDLQGTVLDSHALILQPCNVKNDGQKQKTLEKDRSSTKLLIKNVAFEATEKDLRRLFSPF 744

Query: 399  GQIKSLRLPKKVDNQHKGFAFVEYVTKKEAQYALQQVSHTHFRGRPLV 256
            GQIKSLRLP K  N H+GFAFVEYVT++EAQ AL+ +S TH  GR LV
Sbjct: 745  GQIKSLRLPMKFGN-HRGFAFVEYVTQQEAQNALKALSSTHLYGRHLV 791



 Score = 51.6 bits (122), Expect(2) = e-120
 Identities = 26/47 (55%), Positives = 34/47 (72%)
 Frame = -1

Query: 188 VVEHAKEAECLEELRARTKAQFSEACSGLLNSARMLKKRKKLGGFDE 48
           V+E AKEAE LEELRART AQFS+  +G  ++ +  KKRK++   DE
Sbjct: 791 VIERAKEAESLEELRARTAAQFSDEQNGFQSAMKFSKKRKQVDFLDE 837


>ref|XP_004162358.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
            [Cucumis sativus]
          Length = 826

 Score =  410 bits (1053), Expect(2) = e-119
 Identities = 215/347 (61%), Positives = 264/347 (76%), Gaps = 13/347 (3%)
 Frame = -3

Query: 1257 KSDFLDNEAEDLAVRTALGETHVIAETKKALAKVGVNITSLEKFAALKSNDFKRSNHVIL 1078
            K + LD EA+DLAVR ALGET V+AETKKAL   GVN+ SLE+FA+ K++  KRSNH++L
Sbjct: 431  KGELLDREADDLAVRVALGETQVVAETKKALTNAGVNVASLEEFASGKADGHKRSNHILL 490

Query: 1077 VKNLPYGSSEIELAAMFGRFGSLDKIILPSTKTLALIIFLEPSEARAAFNGLRYKRYKDG 898
            VKNLPYGSS+ ELA MFG+FGS+DKIILPSTK LAL+IFLEPS ARAAF GL YKRYKD 
Sbjct: 491  VKNLPYGSSQGELANMFGKFGSVDKIILPSTKILALVIFLEPSVARAAFKGLAYKRYKDA 550

Query: 897  PLYLEWAPSDILAEDETSNRT---IVGEDEVNRVRLEQEVEGLMDPYIDHDSNESMSLYV 727
            PLYLEWAP +IL++   +       VGE +  RV LEQ VEG+ D  +D D  ES SL+V
Sbjct: 551  PLYLEWAPDNILSQKPMAGNVEDEKVGEGDTRRVMLEQAVEGIPDVDLDPDRVESRSLFV 610

Query: 726  KNLNFKTSAESLKKHFSELVKGGKILSVRVLK----------GFGFIEFDSVGAAVTICR 577
            KNLNFKT+ ESL+ HFSE +K GKILS +V K          GFGF+EFDSV  + ++C 
Sbjct: 611  KNLNFKTTDESLRNHFSEHMKEGKILSAKVKKHVKKGQHVSMGFGFLEFDSVETSTSVCS 670

Query: 576  DLQGTVLDGHALILQICHANKEGKTTKKVENDKSPTKLIIRNVAFEATKKELRDMFCKYG 397
            +LQGTVLDGHALILQ+C+  K+ +  +KV+ ++S TKL++RNVAFEAT K+LR +F  YG
Sbjct: 671  NLQGTVLDGHALILQMCNVKKDDQGKRKVDKEQSSTKLLVRNVAFEATGKDLRQLFSPYG 730

Query: 396  QIKSLRLPKKVDNQHKGFAFVEYVTKKEAQYALQQVSHTHFRGRPLV 256
            QIKSLRLP K   +H+GFAFVE+VTK+EAQ A Q +S+TH  GR LV
Sbjct: 731  QIKSLRLPMKF-GKHRGFAFVEFVTKQEAQNAFQALSNTHLYGRHLV 776



 Score = 47.0 bits (110), Expect(2) = e-119
 Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
 Frame = -1

Query: 188 VVEHAKEAECLEELRARTKAQFSEACSGLLNSARMLKKRKKLGGFDED----HRTD 33
           V+E AKE E LEELRART AQFS     +++     KKRK++  FDED     RTD
Sbjct: 776 VLERAKEGESLEELRARTAAQFSNDQDPIVS-----KKRKQMADFDEDRMKLQRTD 826


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