BLASTX nr result
ID: Lithospermum22_contig00010266
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00010266
(876 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002330570.1| high mobility group family [Populus trichoca... 143 4e-36
ref|XP_002531766.1| transcription factor, putative [Ricinus comm... 143 1e-35
ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 ... 136 7e-34
ref|XP_003527572.1| PREDICTED: LOW QUALITY PROTEIN: high mobilit... 116 1e-28
ref|XP_002884962.1| high mobility group family protein [Arabidop... 114 2e-26
>ref|XP_002330570.1| high mobility group family [Populus trichocarpa]
gi|222872128|gb|EEF09259.1| high mobility group family
[Populus trichocarpa]
Length = 316
Score = 143 bits (361), Expect(2) = 4e-36
Identities = 76/172 (44%), Positives = 108/172 (62%), Gaps = 1/172 (0%)
Frame = -1
Query: 876 LRKCYLSLLYHFEQVYYFRREEPPTSVSDLRSPSEYTNGSTFLQASKDATAVDQHFDGLD 697
LRK YLSLLYHFEQVY+F ++ P S +D + NGS L+ + +Q
Sbjct: 117 LRKHYLSLLYHFEQVYHFNKQIPLVSGTDAMNGRSLVNGSATLE---EGAITNQFSSSQQ 173
Query: 696 LEDGSTITGTIDAKFDNGYIVTVDLGFEKLNGVLYHMPMSTNMSQAFVPVSSTSGRKRRR 517
L+ G +++G ID KFDNGY+VTV+LG +L GVLYH+P + + SQ R+R+R
Sbjct: 174 LQIGCSVSGIIDGKFDNGYLVTVNLGTNQLKGVLYHIPHTFHESQDSRSSDLPPRRRRKR 233
Query: 516 -KLEVEDPSRVSRPNSNGNGYSFFFDQQYARLNPSYHGQDKSTTNEIGAMWN 364
+L + DP S+P SN +GY+FFF + YA+L P +HGQ+K + +IG +WN
Sbjct: 234 SRLALRDP---SQPKSNRSGYNFFFTEHYAQLKPLHHGQEKVISKKIGLLWN 282
Score = 34.7 bits (78), Expect(2) = 4e-36
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = -2
Query: 353 LSAAEKQVYQVIGLRDREIHKTELSE*SSSH 261
L+ AEKQVYQ GLRD+E ++ E+ E SS+
Sbjct: 284 LTEAEKQVYQEKGLRDKEKYRNEMLEYRSSY 314
>ref|XP_002531766.1| transcription factor, putative [Ricinus communis]
gi|223528602|gb|EEF30622.1| transcription factor,
putative [Ricinus communis]
Length = 313
Score = 143 bits (361), Expect(2) = 1e-35
Identities = 81/172 (47%), Positives = 109/172 (63%), Gaps = 1/172 (0%)
Frame = -1
Query: 876 LRKCYLSLLYHFEQVYYFRREEPPTSVSDLRSPSEYTNGSTFLQASKDATAVDQHFDGLD 697
LRK YLSLLYHFEQVY F ++ P SVSD + NGS A+ + V+Q
Sbjct: 116 LRKYYLSLLYHFEQVYQFHKQVPSVSVSDDVN-GNLVNGS----ATVEGVTVNQFPGSSQ 170
Query: 696 LEDGSTITGTIDAKFDNGYIVTVDLGFEKLNGVLYHMPMSTNMSQAFVPVSSTSGRKRRR 517
L+ GS++ GTID KFDNGY++TV LG E+L GVLYH+P MSQ+ R R+R
Sbjct: 171 LQLGSSVNGTIDGKFDNGYLITVTLGSEQLKGVLYHIPNEFYMSQSSHNSDLPPRRHRKR 230
Query: 516 -KLEVEDPSRVSRPNSNGNGYSFFFDQQYARLNPSYHGQDKSTTNEIGAMWN 364
+L + DP SRP S+ +GY+FFF + YA+L P ++GQ+K + +IG +WN
Sbjct: 231 SRLLLRDP---SRPKSHRSGYNFFFAEHYAQLKPLHYGQEKVISKKIGLLWN 279
Score = 33.1 bits (74), Expect(2) = 1e-35
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = -2
Query: 353 LSAAEKQVYQVIGLRDREIHKTELSE*SSSH 261
L+ AEK++YQ GL+D+E +K E+ E SS+
Sbjct: 281 LTEAEKEIYQEKGLKDKERYKNEMLEYRSSY 311
>ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 [Vitis vinifera]
gi|296090037|emb|CBI39856.3| unnamed protein product
[Vitis vinifera]
Length = 331
Score = 136 bits (342), Expect(2) = 7e-34
Identities = 76/176 (43%), Positives = 109/176 (61%), Gaps = 5/176 (2%)
Frame = -1
Query: 876 LRKCYLSLLYHFEQVYYFRREEPPTSVSDLRSPSEYTNGSTFLQASKDATAVDQHFDGLD 697
LRK YLSLL+H+EQVYYFR++ P S++D + S NGS +D+ +
Sbjct: 126 LRKYYLSLLHHYEQVYYFRKQSFPISMADPLNSSPI-NGSATTPVFQDSATTNDLPVSPR 184
Query: 696 LEDGSTITGTIDAKFDNGYIVTVDLGFEKLNGVLYHMP-----MSTNMSQAFVPVSSTSG 532
L+ G +TGTID KFDNGY+V+V+LG + L GVLYH+P MS + + + VP
Sbjct: 185 LQPGCLVTGTIDGKFDNGYLVSVNLGSDVLKGVLYHIPNNESHMSRSSNASAVP---PPR 241
Query: 531 RKRRRKLEVEDPSRVSRPNSNGNGYSFFFDQQYARLNPSYHGQDKSTTNEIGAMWN 364
+R +L + DP SRP + +GY+FFF + YARL P Y GQ+++ + +IG +WN
Sbjct: 242 NWKRSQLALRDP---SRPKRSQSGYNFFFAENYARLKPLYSGQERAISKKIGFLWN 294
Score = 34.7 bits (78), Expect(2) = 7e-34
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = -2
Query: 356 RLSAAEKQVYQVIGLRDREIHKTELSE*SSSHYPEAQ 246
RL+ AEKQVYQ G+ D+E +KTE+ E S++ + Q
Sbjct: 295 RLTDAEKQVYQEKGMIDKERYKTEMLEYRSAYDSKPQ 331
>ref|XP_003527572.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group B protein
10-like [Glycine max]
Length = 339
Score = 116 bits (291), Expect(2) = 1e-28
Identities = 74/189 (39%), Positives = 99/189 (52%), Gaps = 18/189 (9%)
Frame = -1
Query: 876 LRKCYLSLLYHFEQVYYFRREEPPTSVSDL--RSPSEYTNGSTFL-------QASKDATA 724
+RK YLS+LYHFEQVYYF R+ P + DL R S ST + + +T
Sbjct: 124 VRKSYLSMLYHFEQVYYFGRQGIPPTTPDLMIRGQSCQPYSSTTIPEVAAVNDSPVQSTP 183
Query: 723 VDQHFDGLDLEDGSTITGTIDAKFDNGYIVTVDLGFEKLNGVLYH---------MPMSTN 571
V H D ++GTIDAKFD GY+VTV LG E+L + MP +
Sbjct: 184 VQAHDD--------MVSGTIDAKFDVGYVVTVTLGSEQLQVSCFMFLITCPRVLMPKAHL 235
Query: 570 MSQAFVPVSSTSGRKRRRKLEVEDPSRVSRPNSNGNGYSFFFDQQYARLNPSYHGQDKST 391
+ + V ++R K DP R P SN +GY+FFF + YARL PSYHGQ+++
Sbjct: 236 VHRILVMTRXNLQSRKRAKYAPRDPFR---PKSNRSGYNFFFAENYARLKPSYHGQERAI 292
Query: 390 TNEIGAMWN 364
+ IG +WN
Sbjct: 293 SKRIGFLWN 301
Score = 36.6 bits (83), Expect(2) = 1e-28
Identities = 20/37 (54%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 LSAAEKQVYQVIGLRDREIHKTELSE*SSSH-YPEAQ 246
LS AE+QVYQ G+RD+E ++TEL E S++ P AQ
Sbjct: 303 LSEAERQVYQEKGIRDKERYRTELMEYKSNNSTPNAQ 339
>ref|XP_002884962.1| high mobility group family protein [Arabidopsis lyrata subsp.
lyrata] gi|297330802|gb|EFH61221.1| high mobility group
family protein [Arabidopsis lyrata subsp. lyrata]
Length = 318
Score = 114 bits (286), Expect(2) = 2e-26
Identities = 69/178 (38%), Positives = 101/178 (56%), Gaps = 7/178 (3%)
Frame = -1
Query: 876 LRKCYLSLLYHFEQVYYFRREEPPTSVSDLRSPSEYTNGSTFLQASKDATAVDQHFDGLD 697
LRK YL L+ E VYY E+P VS ++S E S ++ +D+ G +
Sbjct: 114 LRKYYLKFLFQLEHVYYL--EKP---VSSIQSTDEAMK-SLANESPNPEEGIDEPQVGYE 167
Query: 696 LEDGSTITGTIDAKFDNGYIVTVDLGFEKLNGVLYHMPMSTNMSQ-------AFVPVSST 538
++ G ID KFDNGY+VT+ LG ++L GV+YH+P + + SQ A VP S
Sbjct: 168 VQ------GFIDGKFDNGYLVTMKLGSQELKGVIYHIPQTPSQSQQTMETASATVPSSQR 221
Query: 537 SGRKRRRKLEVEDPSRVSRPNSNGNGYSFFFDQQYARLNPSYHGQDKSTTNEIGAMWN 364
RK+ + V++ +P + +GY+FFF +QYARL P YHGQ++S T +IG MW+
Sbjct: 222 RHRKKSKLAVVDN----QKPKCHRSGYNFFFAEQYARLKPEYHGQERSITKKIGHMWS 275
Score = 31.2 bits (69), Expect(2) = 2e-26
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = -2
Query: 353 LSAAEKQVYQVIGLRDREIHKTELSE*SSSH 261
L+ +EKQVYQ G++D E ++ E+ E SSH
Sbjct: 277 LTESEKQVYQDKGVKDVERYRIEMLEYKSSH 307