BLASTX nr result
ID: Lithospermum22_contig00010211
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00010211
(1952 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containi... 622 e-175
emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera] 594 e-167
ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 590 e-166
ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containi... 590 e-166
ref|XP_003605160.1| Pentatricopeptide repeat-containing protein ... 587 e-165
>ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 622 bits (1603), Expect = e-175
Identities = 305/443 (68%), Positives = 367/443 (82%)
Frame = -2
Query: 1951 LINGYVRSGNPGKALRVFREMEVEGVEPDDVTMIGVVSSIAQVADLDLGREIYRCIVEKG 1772
+INGYVR G +AL +REM+VEG++PD+VTMIGVVSS AQ+ DLDLGRE + I E G
Sbjct: 179 MINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENG 238
Query: 1771 LNNSVRLNNALIDMYIKCGDLVEAKMLFDRMEDKTIVSWTTMVVGYARYGFLEVAHKLFD 1592
L +V L NAL+DMY+KCG+L A+ LFD M +KT+VSWTTMVVGYA+ G L++A KLFD
Sbjct: 239 LKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFD 298
Query: 1591 EMPEKDVYPWNALISGYVQAKRSKEALCLFHEMQASSIMPDEVTMVXXXXXXXXXXXLDV 1412
EMP+KDV PWNA+I GYV A R KEAL LF+EMQA +I PDEVTMV LDV
Sbjct: 299 EMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDV 358
Query: 1411 GIWIHRYIEKHKLYLNVAVGTALIDMYAKCGNMKRALQVFNEMPQRNSLTWTAIIGGLAL 1232
GIWIH YIEKH+L LNVA+GTALIDMYAKCG + +A+QVF E+P RNSLTWTAII GLAL
Sbjct: 359 GIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLAL 418
Query: 1231 HGDAQKAIYHFWEMVGVGLVPDEITFLGVLSACCHGGLVQEGRHIFAQMSSRFHVSPRVK 1052
HG+A AI +F EM+ ++PDE+TFLG+LSACCHGGLV+EGR F+QMSS+F++SP++K
Sbjct: 419 HGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLK 478
Query: 1051 HYSCMVDLLGRAGLLQEAEELIKTMPMEADAVVWGALFFACRIHKNIEIGERAAFRLLEL 872
HYSCMVDLLGRAGLL+EAEELIK+MP+EADAVVWGALFFACRIH N+ +GERAA +LL++
Sbjct: 479 HYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQM 538
Query: 871 DPDDSAIYVLLASMYVEANMWQRAREVRQMMKDRGVEKNPGCSSIEVNGVVSEFIIRDKS 692
DP DS IYVLLA+MY EA MW+ A + R++M+ RGVEK PGCSSIEVNG+V EFI+RDKS
Sbjct: 539 DPHDSGIYVLLANMYGEAEMWKEAGKARKLMRQRGVEKTPGCSSIEVNGIVYEFIVRDKS 598
Query: 691 HPQTNQIYECLIQLSNQMELGEC 623
HPQ+ QIYECLIQL+ Q+EL EC
Sbjct: 599 HPQSEQIYECLIQLTRQLELVEC 621
Score = 150 bits (378), Expect = 2e-33
Identities = 100/377 (26%), Positives = 182/377 (48%), Gaps = 32/377 (8%)
Frame = -2
Query: 1948 INGYVRSGNPGKALRVF-REMEVEGVEPDDVTMIGVVSSIAQVADLDLGREIYRCIVEKG 1772
I G++ S NP +A+ ++ R ++ +G +PD+ T + + A+++ + +G EI ++ G
Sbjct: 78 IRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLG 137
Query: 1771 LNNSVRLNNALIDMYIKCGDLVEAKMLFDRMEDKTIVSWTTMVVGYARYGFLEVAHKLFD 1592
++ + ++NA+I + + CGDL + A K+FD
Sbjct: 138 FDSDIFVSNAVIHLLVSCGDL-------------------------------DGARKMFD 166
Query: 1591 EMPEKDVYPWNALISGYVQAKRSKEALCLFHEMQASSIMPDEVTMVXXXXXXXXXXXLDV 1412
+ +D+ WN++I+GYV+ + EAL + EM+ I PDEVTM+ LD+
Sbjct: 167 KSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDL 226
Query: 1411 GIWIHRYIEKHKLYLNVAVGTALIDMYAKCGNMK-------------------------- 1310
G H YIE++ L L V + AL+DMY KCGN++
Sbjct: 227 GRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQ 286
Query: 1309 -----RALQVFNEMPQRNSLTWTAIIGGLALHGDAQKAIYHFWEMVGVGLVPDEITFLGV 1145
A ++F+EMP ++ + W A+IGG ++A+ F EM + + PDE+T +
Sbjct: 287 SGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSC 346
Query: 1144 LSACCHGGLVQEGRHIFAQMSSRFHVSPRVKHYSCMVDLLGRAGLLQEAEELIKTMPMEA 965
LSAC G + G I + + +S V + ++D+ + G + +A ++ + +P
Sbjct: 347 LSACSQLGALDVGIWIHHYI-EKHELSLNVALGTALIDMYAKCGKITKAIQVFQELP-GR 404
Query: 964 DAVVWGALFFACRIHKN 914
+++ W A+ +H N
Sbjct: 405 NSLTWTAIISGLALHGN 421
Score = 79.3 bits (194), Expect = 3e-12
Identities = 75/355 (21%), Positives = 146/355 (41%), Gaps = 45/355 (12%)
Frame = -2
Query: 1762 SVRLNNALIDMYIKCGDLVEAKMLFDRM------EDKTIVSWTTMVVGYARYGFLEVAHK 1601
S++L N + + KC + + K + +M ED S + + L+
Sbjct: 2 SLQLINPFLSLLEKCKSISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTN 61
Query: 1600 LFDEMPEKDVYPWNALISGYVQAKRSKEALCLFHE-MQASSIMPDEVTMVXXXXXXXXXX 1424
+ + + WN I G++ ++ +EA+ L+ +Q PD T
Sbjct: 62 ILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLS 121
Query: 1423 XLDVGIWIHRYIEKHKLYLNVAVGTALIDMYAKCGNMKRALQVFNEMPQRNSLTWTAIIG 1244
+ +G I ++ ++ V A+I + CG++ A ++F++ R+ ++W ++I
Sbjct: 122 LIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMIN 181
Query: 1243 GLALHGDAQKAIYHFWEMVGVGLVPDEITFLGVLSACCH--------------------- 1127
G G A +A+ + EM G+ PDE+T +GV+S+C
Sbjct: 182 GYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKL 241
Query: 1126 --------------GGLVQEGRHIFAQMSSRFHVSPRVKHYSCMVDLLGRAGLLQEAEEL 989
G ++ R +F M+++ VS ++ MV ++GLL A +L
Sbjct: 242 TVPLANALMDMYMKCGNLESARKLFDSMTNKTMVS-----WTTMVVGYAQSGLLDMAWKL 296
Query: 988 IKTMPMEADAVVWGALFFACRIHKNIEIGERAAF---RLLELDPDDSAIYVLLAS 833
MP + D V W A+ +H N A F + + ++PD+ + L++
Sbjct: 297 FDEMP-DKDVVPWNAM-IGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSA 349
>emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 594 bits (1532), Expect = e-167
Identities = 296/443 (66%), Positives = 355/443 (80%)
Frame = -2
Query: 1951 LINGYVRSGNPGKALRVFREMEVEGVEPDDVTMIGVVSSIAQVADLDLGREIYRCIVEKG 1772
+INGYVR G +AL +REM+VEG++PD+VTMIGVVSS AQ+ DLDLGRE + I E G
Sbjct: 151 MINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENG 210
Query: 1771 LNNSVRLNNALIDMYIKCGDLVEAKMLFDRMEDKTIVSWTTMVVGYARYGFLEVAHKLFD 1592
L +V L NAL+DMY+KCG+L A+ LFD M +KT+VSWTTM LFD
Sbjct: 211 LKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTM---------------LFD 255
Query: 1591 EMPEKDVYPWNALISGYVQAKRSKEALCLFHEMQASSIMPDEVTMVXXXXXXXXXXXLDV 1412
EMP+KDV PWNA+I GYV A R KEAL LF+EMQA +I PDEVTMV LDV
Sbjct: 256 EMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDV 315
Query: 1411 GIWIHRYIEKHKLYLNVAVGTALIDMYAKCGNMKRALQVFNEMPQRNSLTWTAIIGGLAL 1232
GIWIH YIEKH+L LNVA+GTALIDMYAKCG + +A+QVF E+P RNSLTWTAII GLAL
Sbjct: 316 GIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLAL 375
Query: 1231 HGDAQKAIYHFWEMVGVGLVPDEITFLGVLSACCHGGLVQEGRHIFAQMSSRFHVSPRVK 1052
HG+A AI +F EM+ ++PDE+TFLG+LSACCHGGLV+EGR F+QMSS+F++SP++K
Sbjct: 376 HGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLK 435
Query: 1051 HYSCMVDLLGRAGLLQEAEELIKTMPMEADAVVWGALFFACRIHKNIEIGERAAFRLLEL 872
HYSCMVDLLGRAGLL+EAEELIK+MP+EADAVVWGALFFACRIH N+ +GERAA +LL++
Sbjct: 436 HYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQM 495
Query: 871 DPDDSAIYVLLASMYVEANMWQRAREVRQMMKDRGVEKNPGCSSIEVNGVVSEFIIRDKS 692
DP DS IYVLLA+MY EA MW+ A + R++M+ RGVEK PGCSSIEVNG+V EFI+RDKS
Sbjct: 496 DPHDSGIYVLLANMYGEAEMWKEAGKXRKLMRQRGVEKTPGCSSIEVNGIVYEFIVRDKS 555
Query: 691 HPQTNQIYECLIQLSNQMELGEC 623
HPQ+ QIYECLIQL+ Q+EL EC
Sbjct: 556 HPQSEQIYECLIQLTRQLELVEC 578
Score = 155 bits (393), Expect = 3e-35
Identities = 100/362 (27%), Positives = 181/362 (50%), Gaps = 17/362 (4%)
Frame = -2
Query: 1948 INGYVRSGNPGKALRVF-REMEVEGVEPDDVTMIGVVSSIAQVADLDLGREIYRCIVEKG 1772
I G++ S NP +A+ ++ R ++ +G +PD+ T + + A+++ + +G EI ++ G
Sbjct: 50 IRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLG 109
Query: 1771 LNNSVRLNNALIDMYIKCGDLVEAKMLFDRMEDKTIVSWTTMVVGYARYGFLEVAHKLFD 1592
++ + ++NA+I + + CGDL + A K+FD
Sbjct: 110 FDSDIFVSNAVIHLLVSCGDL-------------------------------DGARKMFD 138
Query: 1591 EMPEKDVYPWNALISGYVQAKRSKEALCLFHEMQASSIMPDEVTMVXXXXXXXXXXXLDV 1412
+ +D+ WN++I+GYV+ + EAL + EM+ I PDEVTM+ LD+
Sbjct: 139 KSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDL 198
Query: 1411 GIWIHRYIEKHKLYLNVAVGTALIDMYAKCGNMKRA----------------LQVFNEMP 1280
G H YIE++ L L V + AL+DMY KCGN++ A +F+EMP
Sbjct: 199 GRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMP 258
Query: 1279 QRNSLTWTAIIGGLALHGDAQKAIYHFWEMVGVGLVPDEITFLGVLSACCHGGLVQEGRH 1100
++ + W A+IGG ++A+ F EM + + PDE+T + LSAC G + G
Sbjct: 259 DKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIW 318
Query: 1099 IFAQMSSRFHVSPRVKHYSCMVDLLGRAGLLQEAEELIKTMPMEADAVVWGALFFACRIH 920
I + + +S V + ++D+ + G + +A ++ + +P +++ W A+ +H
Sbjct: 319 IHHYI-EKHELSLNVALGTALIDMYAKCGKITKAIQVFQELP-GRNSLTWTAIISGLALH 376
Query: 919 KN 914
N
Sbjct: 377 GN 378
Score = 74.7 bits (182), Expect = 8e-11
Identities = 50/215 (23%), Positives = 100/215 (46%), Gaps = 1/215 (0%)
Frame = -2
Query: 1576 DVYPWNALISGYVQAKRSKEALCLFHE-MQASSIMPDEVTMVXXXXXXXXXXXLDVGIWI 1400
+ + WN I G++ ++ +EA+ L+ +Q PD T + +G I
Sbjct: 42 NTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEI 101
Query: 1399 HRYIEKHKLYLNVAVGTALIDMYAKCGNMKRALQVFNEMPQRNSLTWTAIIGGLALHGDA 1220
++ ++ V A+I + CG++ A ++F++ R+ ++W ++I G G A
Sbjct: 102 LGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWA 161
Query: 1219 QKAIYHFWEMVGVGLVPDEITFLGVLSACCHGGLVQEGRHIFAQMSSRFHVSPRVKHYSC 1040
+A+ + EM G+ PDE+T +GV+S+C + GR + + V +
Sbjct: 162 YEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEEN-GLKLTVPLANA 220
Query: 1039 MVDLLGRAGLLQEAEELIKTMPMEADAVVWGALFF 935
++D+ + G L+ A +L +M + V W + F
Sbjct: 221 LMDMYMKCGNLESARKLFDSMTNKT-MVSWTTMLF 254
>ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 590 bits (1522), Expect = e-166
Identities = 286/442 (64%), Positives = 360/442 (81%)
Frame = -2
Query: 1951 LINGYVRSGNPGKALRVFREMEVEGVEPDDVTMIGVVSSIAQVADLDLGREIYRCIVEKG 1772
+INGYVR G +A ++ +M V PD+VTMIGVVS+ AQ+ +L LGR++++ I E G
Sbjct: 227 IINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMG 286
Query: 1771 LNNSVRLNNALIDMYIKCGDLVEAKMLFDRMEDKTIVSWTTMVVGYARYGFLEVAHKLFD 1592
LN +V L NAL+DMYIKC ++ AK+LF+ M KT+VSWTTMV+GYA++G LE A +LF+
Sbjct: 287 LNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFN 346
Query: 1591 EMPEKDVYPWNALISGYVQAKRSKEALCLFHEMQASSIMPDEVTMVXXXXXXXXXXXLDV 1412
EMPEKDV WNALI G+VQAKRSKEAL LFHEMQASS+ PD++T+V LDV
Sbjct: 347 EMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDV 406
Query: 1411 GIWIHRYIEKHKLYLNVAVGTALIDMYAKCGNMKRALQVFNEMPQRNSLTWTAIIGGLAL 1232
GIW+H Y++KH L +NVA+GTAL+DMYAKCGN+K+A+QVF EMP RNSLTWTAII GLAL
Sbjct: 407 GIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLAL 466
Query: 1231 HGDAQKAIYHFWEMVGVGLVPDEITFLGVLSACCHGGLVQEGRHIFAQMSSRFHVSPRVK 1052
HG AI +F EM+ +GLVPDEITF+GVLSACCHGGLV +GR F QM+S++ +SP++K
Sbjct: 467 HGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLK 526
Query: 1051 HYSCMVDLLGRAGLLQEAEELIKTMPMEADAVVWGALFFACRIHKNIEIGERAAFRLLEL 872
HYSC+VDLLGRAG L+EAEELI++MP E DAVVWGALFF RIH N+ +GERAA +LLEL
Sbjct: 527 HYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLEL 586
Query: 871 DPDDSAIYVLLASMYVEANMWQRAREVRQMMKDRGVEKNPGCSSIEVNGVVSEFIIRDKS 692
DP D IYVLLA+MY +ANMW++AR+VR+MM++RGVEK PGCSSIE+NG+V +FIIRDKS
Sbjct: 587 DPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRDKS 646
Query: 691 HPQTNQIYECLIQLSNQMELGE 626
HPQ+ +IYECL +L+ Q+E+ E
Sbjct: 647 HPQSEKIYECLTRLTRQIEVIE 668
Score = 131 bits (330), Expect = 6e-28
Identities = 91/344 (26%), Positives = 169/344 (49%), Gaps = 1/344 (0%)
Frame = -2
Query: 1948 INGYVRSGNPGKALRVFREMEVEGVE-PDDVTMIGVVSSIAQVADLDLGREIYRCIVEKG 1772
I GYV S NP A+ ++R M +G PD+ T + A + EI +++ G
Sbjct: 126 IRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLG 185
Query: 1771 LNNSVRLNNALIDMYIKCGDLVEAKMLFDRMEDKTIVSWTTMVVGYARYGFLEVAHKLFD 1592
++ + ++NA+I + + CG+L+ A+ LFD + +VSW +++ GY R G + A L+
Sbjct: 186 FDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYY 245
Query: 1591 EMPEKDVYPWNALISGYVQAKRSKEALCLFHEMQASSIMPDEVTMVXXXXXXXXXXXLDV 1412
+M E +V P + G V A E L L ++ S V
Sbjct: 246 KMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCK 305
Query: 1411 GIWIHRYIEKHKLYLNVAVGTALIDMYAKCGNMKRALQVFNEMPQRNSLTWTAIIGGLAL 1232
I + + ++ V T ++ YAK G ++ A+++FNEMP+++ + W A+IGG
Sbjct: 306 NIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQ 365
Query: 1231 HGDAQKAIYHFWEMVGVGLVPDEITFLGVLSACCHGGLVQEGRHIFAQMSSRFHVSPRVK 1052
+++A+ F EM + PD+IT + LSAC G + G + + + +++ V
Sbjct: 366 AKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYV-DKHNLTMNVA 424
Query: 1051 HYSCMVDLLGRAGLLQEAEELIKTMPMEADAVVWGALFFACRIH 920
+ +VD+ + G +++A ++ + MP +++ W A+ +H
Sbjct: 425 LGTALVDMYAKCGNIKKAIQVFEEMP-GRNSLTWTAIICGLALH 467
Score = 75.1 bits (183), Expect = 6e-11
Identities = 69/311 (22%), Positives = 126/311 (40%), Gaps = 41/311 (13%)
Frame = -2
Query: 1750 NNALIDMYIKCGDLVEAKMLFDRM------EDKTIVSWTTMVVGYARYGFLEVAHKLFDE 1589
+N L+ + C + + K + +M D +S + + L+ K+ +
Sbjct: 54 SNPLLSLLEACTSMAKMKEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNN 113
Query: 1588 MPEKDVYPWNALISGYVQAKRSKEALCLFHEM-QASSIMPDEVTMVXXXXXXXXXXXLDV 1412
+ + WN I GYV+++ A+ L+ M + S +PD T
Sbjct: 114 AANLNXFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLS-- 171
Query: 1411 GIWIHRYIEKHKLYL----NVAVGTALIDMYAKCGNMKRALQVFNEMPQRNSLTWTAIIG 1244
W I H + L ++ V A+I + CG + A ++F+E R+ ++W +II
Sbjct: 172 --WTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIIN 229
Query: 1243 GLALHGDAQKAIYHFWEMVGVGLVPDEITFLGVLSACC-----------HGGLVQEGRHI 1097
G G A +A +++M + ++PDE+T +GV+SA H + + G ++
Sbjct: 230 GYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNL 289
Query: 1096 FAQMSSRF-------------------HVSPRVKHYSCMVDLLGRAGLLQEAEELIKTMP 974
+++ V ++ MV + GLL+ A L MP
Sbjct: 290 TVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMP 349
Query: 973 MEADAVVWGAL 941
E D V+W AL
Sbjct: 350 -EKDVVLWNAL 359
>ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 590 bits (1522), Expect = e-166
Identities = 286/442 (64%), Positives = 360/442 (81%)
Frame = -2
Query: 1951 LINGYVRSGNPGKALRVFREMEVEGVEPDDVTMIGVVSSIAQVADLDLGREIYRCIVEKG 1772
+INGYVR G +A ++ +M V PD+VTMIGVVS+ AQ+ +L LGR++++ I E G
Sbjct: 227 IINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMG 286
Query: 1771 LNNSVRLNNALIDMYIKCGDLVEAKMLFDRMEDKTIVSWTTMVVGYARYGFLEVAHKLFD 1592
LN +V L NAL+DMYIKC ++ AK+LF+ M KT+VSWTTMV+GYA++G LE A +LF+
Sbjct: 287 LNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFN 346
Query: 1591 EMPEKDVYPWNALISGYVQAKRSKEALCLFHEMQASSIMPDEVTMVXXXXXXXXXXXLDV 1412
EMPEKDV WNALI G+VQAKRSKEAL LFHEMQASS+ PD++T+V LDV
Sbjct: 347 EMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDV 406
Query: 1411 GIWIHRYIEKHKLYLNVAVGTALIDMYAKCGNMKRALQVFNEMPQRNSLTWTAIIGGLAL 1232
GIW+H Y++KH L +NVA+GTAL+DMYAKCGN+K+A+QVF EMP RNSLTWTAII GLAL
Sbjct: 407 GIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLAL 466
Query: 1231 HGDAQKAIYHFWEMVGVGLVPDEITFLGVLSACCHGGLVQEGRHIFAQMSSRFHVSPRVK 1052
HG AI +F EM+ +GLVPDEITF+GVLSACCHGGLV +GR F QM+S++ +SP++K
Sbjct: 467 HGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLK 526
Query: 1051 HYSCMVDLLGRAGLLQEAEELIKTMPMEADAVVWGALFFACRIHKNIEIGERAAFRLLEL 872
HYSC+VDLLGRAG L+EAEELI++MP E DAVVWGALFF RIH N+ +GERAA +LLEL
Sbjct: 527 HYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLEL 586
Query: 871 DPDDSAIYVLLASMYVEANMWQRAREVRQMMKDRGVEKNPGCSSIEVNGVVSEFIIRDKS 692
DP D IYVLLA+MY +ANMW++AR+VR+MM++RGVEK PGCSSIE+NG+V +FIIRDKS
Sbjct: 587 DPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRDKS 646
Query: 691 HPQTNQIYECLIQLSNQMELGE 626
HPQ+ +IYECL +L+ Q+E+ E
Sbjct: 647 HPQSEKIYECLTRLTRQIEVIE 668
Score = 131 bits (330), Expect = 6e-28
Identities = 91/344 (26%), Positives = 169/344 (49%), Gaps = 1/344 (0%)
Frame = -2
Query: 1948 INGYVRSGNPGKALRVFREMEVEGVE-PDDVTMIGVVSSIAQVADLDLGREIYRCIVEKG 1772
I GYV S NP A+ ++R M +G PD+ T + A + EI +++ G
Sbjct: 126 IRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLG 185
Query: 1771 LNNSVRLNNALIDMYIKCGDLVEAKMLFDRMEDKTIVSWTTMVVGYARYGFLEVAHKLFD 1592
++ + ++NA+I + + CG+L+ A+ LFD + +VSW +++ GY R G + A L+
Sbjct: 186 FDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYY 245
Query: 1591 EMPEKDVYPWNALISGYVQAKRSKEALCLFHEMQASSIMPDEVTMVXXXXXXXXXXXLDV 1412
+M E +V P + G V A E L L ++ S V
Sbjct: 246 KMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCK 305
Query: 1411 GIWIHRYIEKHKLYLNVAVGTALIDMYAKCGNMKRALQVFNEMPQRNSLTWTAIIGGLAL 1232
I + + ++ V T ++ YAK G ++ A+++FNEMP+++ + W A+IGG
Sbjct: 306 NIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQ 365
Query: 1231 HGDAQKAIYHFWEMVGVGLVPDEITFLGVLSACCHGGLVQEGRHIFAQMSSRFHVSPRVK 1052
+++A+ F EM + PD+IT + LSAC G + G + + + +++ V
Sbjct: 366 AKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYV-DKHNLTMNVA 424
Query: 1051 HYSCMVDLLGRAGLLQEAEELIKTMPMEADAVVWGALFFACRIH 920
+ +VD+ + G +++A ++ + MP +++ W A+ +H
Sbjct: 425 LGTALVDMYAKCGNIKKAIQVFEEMP-GRNSLTWTAIICGLALH 467
Score = 77.0 bits (188), Expect = 2e-11
Identities = 70/311 (22%), Positives = 127/311 (40%), Gaps = 41/311 (13%)
Frame = -2
Query: 1750 NNALIDMYIKCGDLVEAKMLFDRM------EDKTIVSWTTMVVGYARYGFLEVAHKLFDE 1589
+N L+ + C + + K + +M D +S + + L+ K+ +
Sbjct: 54 SNPLLSLLEACTSMAKMKEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNN 113
Query: 1588 MPEKDVYPWNALISGYVQAKRSKEALCLFHEM-QASSIMPDEVTMVXXXXXXXXXXXLDV 1412
+V+ WN I GYV+++ A+ L+ M + S +PD T
Sbjct: 114 AANLNVFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLS-- 171
Query: 1411 GIWIHRYIEKHKLYL----NVAVGTALIDMYAKCGNMKRALQVFNEMPQRNSLTWTAIIG 1244
W I H + L ++ V A+I + CG + A ++F+E R+ ++W +II
Sbjct: 172 --WTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIIN 229
Query: 1243 GLALHGDAQKAIYHFWEMVGVGLVPDEITFLGVLSACC-----------HGGLVQEGRHI 1097
G G A +A +++M + ++PDE+T +GV+SA H + + G ++
Sbjct: 230 GYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNL 289
Query: 1096 FAQMSSRF-------------------HVSPRVKHYSCMVDLLGRAGLLQEAEELIKTMP 974
+++ V ++ MV + GLL+ A L MP
Sbjct: 290 TVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMP 349
Query: 973 MEADAVVWGAL 941
E D V+W AL
Sbjct: 350 -EKDVVLWNAL 359
>ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 587 bits (1513), Expect = e-165
Identities = 276/440 (62%), Positives = 358/440 (81%)
Frame = -2
Query: 1951 LINGYVRSGNPGKALRVFREMEVEGVEPDDVTMIGVVSSIAQVADLDLGREIYRCIVEKG 1772
+I G V+ G +A+++++EME E V P+++TMIG++SS +QV DL+LG+E + I E G
Sbjct: 230 MITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHG 289
Query: 1771 LNNSVRLNNALIDMYIKCGDLVEAKMLFDRMEDKTIVSWTTMVVGYARYGFLEVAHKLFD 1592
L ++ L NAL+DMY+KCG+L+ A++LFD M KT+VSWTTMV+GYAR+GFL+VA ++
Sbjct: 290 LEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILY 349
Query: 1591 EMPEKDVYPWNALISGYVQAKRSKEALCLFHEMQASSIMPDEVTMVXXXXXXXXXXXLDV 1412
++PEK V PWNA+ISG VQAK+ KEAL LFHEMQ +I PD+VTMV LDV
Sbjct: 350 KIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDV 409
Query: 1411 GIWIHRYIEKHKLYLNVAVGTALIDMYAKCGNMKRALQVFNEMPQRNSLTWTAIIGGLAL 1232
GIWIH YIE+HKL ++VA+GTAL+DMYAKCGN+ RALQVF E+PQRN LTWTA+I GLAL
Sbjct: 410 GIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLAL 469
Query: 1231 HGDAQKAIYHFWEMVGVGLVPDEITFLGVLSACCHGGLVQEGRHIFAQMSSRFHVSPRVK 1052
HG+AQ A+ +F +M+ +G+VPDEITFLGVLSACCHGGLV+EGR F++MSS+F+VSP++K
Sbjct: 470 HGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLK 529
Query: 1051 HYSCMVDLLGRAGLLQEAEELIKTMPMEADAVVWGALFFACRIHKNIEIGERAAFRLLEL 872
HYSCMVDLLGRAG L+EAEEL+K MPM ADA V GALFFACR++ N++IGER AF+LLE+
Sbjct: 530 HYSCMVDLLGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEI 589
Query: 871 DPDDSAIYVLLASMYVEANMWQRAREVRQMMKDRGVEKNPGCSSIEVNGVVSEFIIRDKS 692
DP DS YVLLASMY EA MW+ AR R++M D+GVEK PGCS +E+NG+V EF++RD S
Sbjct: 590 DPQDSGNYVLLASMYSEAKMWKEARSARKLMNDKGVEKTPGCSLVEINGIVHEFVVRDVS 649
Query: 691 HPQTNQIYECLIQLSNQMEL 632
HPQ+ IYECL+ L+ Q+++
Sbjct: 650 HPQSEWIYECLVTLTKQLDV 669
Score = 116 bits (291), Expect = 2e-23
Identities = 89/379 (23%), Positives = 167/379 (44%), Gaps = 32/379 (8%)
Frame = -2
Query: 1948 INGYVRSGNPGKALRVFREMEVEG-VEPDDVTMIGVVSSIAQVADLDLGREIYRCIVEKG 1772
I GYV SG+ +++ M + G ++PD+ T ++ LG + +++ G
Sbjct: 129 IRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGVLGHVLKFG 188
Query: 1771 LNNSVRLNNALIDMYIKCGDLVEAKMLFDRMEDKTIVSWTTMVVGYARYGFLEVAHKLFD 1592
+ ++NA I M + CG+L VA+ +F+
Sbjct: 189 FECDIFVHNASITMLLSCGEL-------------------------------SVAYDVFN 217
Query: 1591 EMPEKDVYPWNALISGYVQAKRSKEALCLFHEMQASSIMPDEVTMVXXXXXXXXXXXLDV 1412
+ +D+ WN++I+G V+ + EA+ ++ EM+A + P+E+TM+ L++
Sbjct: 218 KSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNL 277
Query: 1411 GIWIHRYIEKHKLYLNVAVGTALIDMYAKCGNMKRALQVFNEMPQRNSLTWTAIIGGLAL 1232
G H YI++H L + + AL+DMY KCG + A +F+ M Q+ ++WT ++ G A
Sbjct: 278 GKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYAR 337
Query: 1231 HG-------------------------------DAQKAIYHFWEMVGVGLVPDEITFLGV 1145
G ++A+ F EM + PD++T +
Sbjct: 338 FGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNC 397
Query: 1144 LSACCHGGLVQEGRHIFAQMSSRFHVSPRVKHYSCMVDLLGRAGLLQEAEELIKTMPMEA 965
LSAC G + G I + R +S V + +VD+ + G + A ++ + +P +
Sbjct: 398 LSACSQLGALDVGIWIHHYI-ERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIP-QR 455
Query: 964 DAVVWGALFFACRIHKNIE 908
+ + W A+ +H N +
Sbjct: 456 NCLTWTAVICGLALHGNAQ 474
Score = 79.0 bits (193), Expect = 4e-12
Identities = 75/315 (23%), Positives = 126/315 (40%), Gaps = 42/315 (13%)
Frame = -2
Query: 1747 NALIDMYIKCGDLVEAKMLFDRM------EDKTIVSWTTMVVGYARYGFLEVAHKLFDEM 1586
N L+ + +C LV+ K + +M E+ S + L+ ++ +
Sbjct: 58 NPLLSILERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRI 117
Query: 1585 PEKDVYPWNALISGYVQAKRSKEALCLFHEMQ-ASSIMPDEVTMVXXXXXXXXXXXLDVG 1409
E +V+ WNA I GYV++ + L+ M ++ PD T +G
Sbjct: 118 KELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLG 177
Query: 1408 IWIHRYIEKHKLYLNVAVGTALIDMYAKCGNMKRALQVFNEMPQRNSLTWTAIIGGLALH 1229
+ + ++ K ++ V A I M CG + A VFN+ R+ +TW ++I G
Sbjct: 178 LGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKR 237
Query: 1228 GDAQKAIYHFWEMVGVGLVPDEITFLGVLSACC-----------------HG-------- 1124
G A +AI + EM + P+EIT +G++S+C HG
Sbjct: 238 GLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLT 297
Query: 1123 ----------GLVQEGRHIFAQMSSRFHVSPRVKHYSCMVDLLGRAGLLQEAEELIKTMP 974
G + R +F M+ + VS ++ MV R G L A E++ +P
Sbjct: 298 NALMDMYVKCGELLTARVLFDNMAQKTLVS-----WTTMVLGYARFGFLDVAREILYKIP 352
Query: 973 MEADAVVWGALFFAC 929
E V W A+ C
Sbjct: 353 -EKSVVPWNAIISGC 366