BLASTX nr result

ID: Lithospermum22_contig00010151 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00010151
         (815 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P23326.1|RK35_SPIOL RecName: Full=50S ribosomal protein L35, ...   142   1e-31
ref|XP_003610263.1| 50S ribosomal protein L35 [Medicago truncatu...   139   6e-31
gb|AFK37785.1| unknown [Lotus japonicus] gi|388516355|gb|AFK4623...   137   2e-30
ref|XP_002324518.1| predicted protein [Populus trichocarpa] gi|2...   134   2e-29
gb|ABK93832.1| unknown [Populus trichocarpa]                          134   2e-29

>sp|P23326.1|RK35_SPIOL RecName: Full=50S ribosomal protein L35, chloroplastic; AltName:
           Full=CL35; Flags: Precursor gi|189096153|pdb|3BBO|5
           Chain 5, Homology Model For The Spinach Chloroplast 50s
           Subunit Fitted To 9.4a Cryo-Em Map Of The 70s
           Chlororibosome gi|170139|gb|AAA34043.1| ribosomal
           protein L35 [Spinacia oleracea]
          Length = 159

 Score =  142 bits (357), Expect = 1e-31
 Identities = 72/82 (87%), Positives = 77/82 (93%), Gaps = 1/82 (1%)
 Frame = +1

Query: 343 TSSPS-TIVAAKGYKMKTHKASAKRFRVTGSGKIVRRRAGKQHLLGKKNTKRKLRLSKMV 519
           TSSPS T+ AAKGYKMKTHKASAKRFRVTG GKIVRRRAGKQHLL KKNTKRK RLSK++
Sbjct: 77  TSSPSFTVFAAKGYKMKTHKASAKRFRVTGKGKIVRRRAGKQHLLAKKNTKRKNRLSKLI 136

Query: 520 QVDRSDYNNVIGALPYLKVNRQ 585
           QVDRSDY+NVIGALPYLKVNR+
Sbjct: 137 QVDRSDYDNVIGALPYLKVNRK 158


>ref|XP_003610263.1| 50S ribosomal protein L35 [Medicago truncatula]
           gi|217071304|gb|ACJ84012.1| unknown [Medicago
           truncatula] gi|355511318|gb|AES92460.1| 50S ribosomal
           protein L35 [Medicago truncatula]
           gi|388495356|gb|AFK35744.1| unknown [Medicago
           truncatula]
          Length = 148

 Score =  139 bits (351), Expect = 6e-31
 Identities = 71/84 (84%), Positives = 79/84 (94%), Gaps = 2/84 (2%)
 Frame = +1

Query: 340 ITSSPS--TIVAAKGYKMKTHKASAKRFRVTGSGKIVRRRAGKQHLLGKKNTKRKLRLSK 513
           +T+SP   TIV+AKGYKMKTHKASAKRFRVTG+GKIVRRRAGKQHLL KKN KRKLRLSK
Sbjct: 63  VTTSPRSLTIVSAKGYKMKTHKASAKRFRVTGAGKIVRRRAGKQHLLYKKNKKRKLRLSK 122

Query: 514 MVQVDRSDYNNVIGALPYLKVNRQ 585
           M+QV+RSDY+NVIGALPYLKVNR+
Sbjct: 123 MIQVNRSDYDNVIGALPYLKVNRK 146


>gb|AFK37785.1| unknown [Lotus japonicus] gi|388516355|gb|AFK46239.1| unknown
           [Lotus japonicus]
          Length = 148

 Score =  137 bits (346), Expect = 2e-30
 Identities = 71/82 (86%), Positives = 74/82 (90%)
 Frame = +1

Query: 337 PITSSPSTIVAAKGYKMKTHKASAKRFRVTGSGKIVRRRAGKQHLLGKKNTKRKLRLSKM 516
           P +S   TIVAAKGYKMKTHKASAKRFRVTG GKIVRRRAGKQHLL KKNTKRKLRLSKM
Sbjct: 64  PPSSRSLTIVAAKGYKMKTHKASAKRFRVTGKGKIVRRRAGKQHLLQKKNTKRKLRLSKM 123

Query: 517 VQVDRSDYNNVIGALPYLKVNR 582
             V+RSDY+NVIGALPYLKVNR
Sbjct: 124 HPVNRSDYDNVIGALPYLKVNR 145


>ref|XP_002324518.1| predicted protein [Populus trichocarpa] gi|222865952|gb|EEF03083.1|
           predicted protein [Populus trichocarpa]
          Length = 150

 Score =  134 bits (337), Expect = 2e-29
 Identities = 67/76 (88%), Positives = 70/76 (92%)
 Frame = +1

Query: 358 TIVAAKGYKMKTHKASAKRFRVTGSGKIVRRRAGKQHLLGKKNTKRKLRLSKMVQVDRSD 537
           T+ AAKGYKMKTHKASAKRFRVTG GKIVRRRAGKQHLL KKNTKRKLRLSKM  V RSD
Sbjct: 73  TVFAAKGYKMKTHKASAKRFRVTGKGKIVRRRAGKQHLLAKKNTKRKLRLSKMHPVSRSD 132

Query: 538 YNNVIGALPYLKVNRQ 585
           Y+NVIGALPYLKVNR+
Sbjct: 133 YDNVIGALPYLKVNRK 148


>gb|ABK93832.1| unknown [Populus trichocarpa]
          Length = 150

 Score =  134 bits (337), Expect = 2e-29
 Identities = 67/76 (88%), Positives = 70/76 (92%)
 Frame = +1

Query: 358 TIVAAKGYKMKTHKASAKRFRVTGSGKIVRRRAGKQHLLGKKNTKRKLRLSKMVQVDRSD 537
           T+ AAKGYKMKTHKASAKRFRVTG GKIVRRRAGKQHLL KKNTKRKLRLSKM  V RSD
Sbjct: 73  TVFAAKGYKMKTHKASAKRFRVTGKGKIVRRRAGKQHLLAKKNTKRKLRLSKMHPVSRSD 132

Query: 538 YNNVIGALPYLKVNRQ 585
           Y+NVIGALPYLKVNR+
Sbjct: 133 YDNVIGALPYLKVNRK 148


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