BLASTX nr result

ID: Lithospermum22_contig00010131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00010131
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283987.1| PREDICTED: 50S ribosomal protein 5, chloropl...    72   7e-11
emb|CBI32867.3| unnamed protein product [Vitis vinifera]               67   3e-09
ref|XP_002322592.1| predicted protein [Populus trichocarpa] gi|2...    61   2e-07
ref|XP_004144312.1| PREDICTED: 50S ribosomal protein 5, chloropl...    60   3e-07

>ref|XP_002283987.1| PREDICTED: 50S ribosomal protein 5, chloroplastic-like [Vitis
           vinifera]
          Length = 144

 Score = 72.4 bits (176), Expect = 7e-11
 Identities = 52/147 (35%), Positives = 67/147 (45%)
 Frame = -3

Query: 594 PETKMSLLLSATPPTSTSHLTATHRSSLHPFSRLFSTGANWQQAPFIGYRVQAPIVLRVK 415
           P T +SL LS     ST  +TAT      P SR      +     F G R+ AP  ++ +
Sbjct: 8   PLTSVSLSLSV----STMAITAT------PVSRFLVKPNDTHLKSFNGVRLHAPFTVKQR 57

Query: 414 GALIAKAAAEIDGTGXXXXXXXXXXXXKNVAVGDLPLESKMQLKLEQTTXXXXXXXXXXX 235
             +I KA++++DG                V V +LPLESK+QLKLEQ             
Sbjct: 58  DGVIVKASSDVDGVAPDGGETASEGEEDVVPVENLPLESKLQLKLEQKLRMKIAKKIRLR 117

Query: 234 XXXXXXXXXXXXKGRWPPSKMKKHKNV 154
                       KGRWPPSKMKK+KNV
Sbjct: 118 RKRLVRKRRMRKKGRWPPSKMKKNKNV 144


>emb|CBI32867.3| unnamed protein product [Vitis vinifera]
          Length = 124

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 41/118 (34%), Positives = 54/118 (45%)
 Frame = -3

Query: 507 PFSRLFSTGANWQQAPFIGYRVQAPIVLRVKGALIAKAAAEIDGTGXXXXXXXXXXXXKN 328
           P SR      +     F G R+ AP  ++ +  +I KA++++DG                
Sbjct: 7   PVSRFLVKPNDTHLKSFNGVRLHAPFTVKQRDGVIVKASSDVDGVAPDGGETASEGEEDV 66

Query: 327 VAVGDLPLESKMQLKLEQTTXXXXXXXXXXXXXXXXXXXXXXXKGRWPPSKMKKHKNV 154
           V V +LPLESK+QLKLEQ                         KGRWPPSKMKK+KNV
Sbjct: 67  VPVENLPLESKLQLKLEQKLRMKIAKKIRLRRKRLVRKRRMRKKGRWPPSKMKKNKNV 124


>ref|XP_002322592.1| predicted protein [Populus trichocarpa] gi|222867222|gb|EEF04353.1|
           predicted protein [Populus trichocarpa]
          Length = 147

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 55/148 (37%), Positives = 66/148 (44%), Gaps = 5/148 (3%)
 Frame = -3

Query: 582 MSLLLSATPPTSTSHLTATHRSSLH----PFSRLFSTGANWQQAPFIGYRVQAPIVLRVK 415
           M LLLS  P TS S L      +L     P SRL   G   +   + G R Q PI     
Sbjct: 1   MPLLLS-NPLTSLSSLPPFSSPTLAFIATPVSRLDVKGFELKFKTWNGVRFQNPIRGNRI 59

Query: 414 GALIAKAAAEIDGTGXXXXXXXXXXXXKNV-AVGDLPLESKMQLKLEQTTXXXXXXXXXX 238
           GA+I +A+++IDGT             + V AV  LPLESK+Q + EQ            
Sbjct: 60  GAVIVRASSDIDGTAPTETSEPPVESKEEVVAVDKLPLESKLQEREEQKMKMKLARKIRL 119

Query: 237 XXXXXXXXXXXXXKGRWPPSKMKKHKNV 154
                        KGRWPPSKMKK KNV
Sbjct: 120 RRNRLVRKRRMRKKGRWPPSKMKKLKNV 147


>ref|XP_004144312.1| PREDICTED: 50S ribosomal protein 5, chloroplastic-like [Cucumis
           sativus]
          Length = 153

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 48/151 (31%), Positives = 64/151 (42%), Gaps = 9/151 (5%)
 Frame = -3

Query: 579 SLLLSATPPTSTSHLTATHRSSLHP------FSRLFSTGANWQQAPFIGYRVQAPIVLRV 418
           S LLS+ P +++ H + +   S  P       S L      +Q   F G R++    +  
Sbjct: 3   SFLLSSNPLSTSFHFSTSPSPSCFPPTSAIPSSMLLMKPIGFQPKHFNGVRLRNHSFVEN 62

Query: 417 KGALIAKAAAEIDGTGXXXXXXXXXXXXK---NVAVGDLPLESKMQLKLEQTTXXXXXXX 247
             +L+ KAA+E D TG                +V V  LPLESK+Q +LEQ         
Sbjct: 63  TASLVVKAASETDATGETDSSDVQPAAEAKKEDVPVDKLPLESKLQERLEQKARMKLAKK 122

Query: 246 XXXXXXXXXXXXXXXXKGRWPPSKMKKHKNV 154
                           KGRWPPSKMKK KNV
Sbjct: 123 IRLRRKRLVQKRHLRKKGRWPPSKMKKLKNV 153


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