BLASTX nr result
ID: Lithospermum22_contig00010046
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00010046
(2494 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002325119.1| predicted protein [Populus trichocarpa] gi|2... 888 0.0
sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymeras... 905 0.0
sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymeras... 897 0.0
ref|XP_002308414.1| predicted protein [Populus trichocarpa] gi|2... 886 0.0
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 880 0.0
>ref|XP_002325119.1| predicted protein [Populus trichocarpa] gi|222866553|gb|EEF03684.1|
predicted protein [Populus trichocarpa]
Length = 882
Score = 888 bits (2294), Expect(3) = 0.0
Identities = 425/532 (79%), Positives = 476/532 (89%), Gaps = 1/532 (0%)
Frame = -1
Query: 2137 IVKKYGVIECDPLVLDGLDRTVKHAIIPYVPMLVPPRKWKGYDKGGYLFLPSYLMRTHGS 1958
IVKKYGVIECDPL+L GLD T KH +IPY PMLVPP+KWKGYDKGG+LFLPSY+MRTHGS
Sbjct: 282 IVKKYGVIECDPLILTGLDGTAKHMLIPYFPMLVPPKKWKGYDKGGHLFLPSYVMRTHGS 341
Query: 1957 KRQQTAVKDVPPNQLQKVYEALDTLGNTKWRVNRRILSIVEDLWAGGGNIGGLVNRNDVS 1778
++QQ AV+ VP Q+QKV+EALDTLGNTKWRVNRR+L +VE +W GGNI GLV+R D+
Sbjct: 342 RQQQVAVRSVPGKQMQKVFEALDTLGNTKWRVNRRLLDVVERIWTSGGNIAGLVDREDIP 401
Query: 1777 LPEL-DSDDVEDIXXXXXXXXXXXKINQERHSLRCDVELKLSVARKMRDEEGFYYPHNLD 1601
+PE SDD+ +I KINQERHS RCD ELKLSVARK++DEEGFYYPHNLD
Sbjct: 402 IPEKPSSDDLTEIQKWKWSVRKAKKINQERHSQRCDTELKLSVARKLKDEEGFYYPHNLD 461
Query: 1600 FRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYGGGVEKLPYDDR 1421
FRGRAYPMHPHL HLSSDLCRG+LEF EGRPLGKSGL WLKIHLANLY GGVEKL +D R
Sbjct: 462 FRGRAYPMHPHLTHLSSDLCRGVLEFEEGRPLGKSGLRWLKIHLANLYSGGVEKLSHDGR 521
Query: 1420 LAFVENHLNDILDSANNSLNGKRWWLHAEDPFQCLAACINLSEAIKSSSPYTVISHLPIH 1241
LAFVENHL++I DSA N +NGKRWWL AEDPFQCLAACINLSEA+ S+SP+TVISHLPIH
Sbjct: 522 LAFVENHLSEIFDSAKNPVNGKRWWLKAEDPFQCLAACINLSEALNSASPHTVISHLPIH 581
Query: 1240 QDGSCNGLQHYAALGRDTMEAVAVNLVARDTPADVYSEIAFRVHDIMKRDSIKDPETNPN 1061
QDGSCNGLQHYAALGRDT+EA AVNLVA + P+DVYSEIA RVH+I++RDS KDP TNP+
Sbjct: 582 QDGSCNGLQHYAALGRDTLEAAAVNLVAAEKPSDVYSEIAVRVHEIIRRDSNKDPATNPH 641
Query: 1060 AMLAKILVDQVDRKLVKQTVMTSVYGVTFIGAREQIKKRLEEKGLITDDRLLFSAACYTA 881
A+LAKILVDQVDRKLVKQTVMTSVYGVT++GAREQIK+RLEEKG ITDDRLLFSAACYTA
Sbjct: 642 ALLAKILVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGHITDDRLLFSAACYTA 701
Query: 880 KVTLTALGEIFQAARGIMGWLGDCAKVIAAEDQPVKWTTPLGLPVVQPYFKTQRHVIRTS 701
KVTLTALGE+FQAAR IM WLGDCAK+IA+EDQPV+WTTPLGLPVVQPY+KT+RH+I+TS
Sbjct: 702 KVTLTALGELFQAARDIMSWLGDCAKIIASEDQPVQWTTPLGLPVVQPYYKTERHLIKTS 761
Query: 700 LQVLALQREGISVEGRKQKTAFPPNFVHSLDGSHMMMTAVACRDAGLRFAGI 545
LQ+LALQREG SV+ RKQ+TAFPPNFVHSLDGSHMMMTAVACRDAGL FAG+
Sbjct: 762 LQILALQREGSSVQVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGV 813
Score = 123 bits (309), Expect(3) = 0.0
Identities = 57/71 (80%), Positives = 63/71 (88%)
Frame = -2
Query: 477 GVHDSFWTHACDVDKMNRILREKFVELYSMPILENLLESFQTSHPTLNFPSLPKTGDFKL 298
GVHDSFWTHA DVD MNRILREKFVELY+MPILENLLE FQTS+PTL FP LP+ G+F L
Sbjct: 812 GVHDSFWTHATDVDLMNRILREKFVELYNMPILENLLEDFQTSYPTLQFPPLPERGNFDL 871
Query: 297 EEVLESPYFFN 265
++VL SPYFFN
Sbjct: 872 QKVLRSPYFFN 882
Score = 98.2 bits (243), Expect(3) = 0.0
Identities = 54/116 (46%), Positives = 71/116 (61%)
Frame = -2
Query: 2493 IHSFLEKTRKEQKSAAVNKDGEDFAIEKMILRRRVKSLIRKNRLVEVQKLVKSEAVKSWG 2314
IH+FLEKT+ Q+ +++ E EK +LR+RV SLIR+ RL+EVQ LVK + K W
Sbjct: 169 IHNFLEKTKNYQRKKTMHEVQETMDKEKEVLRKRVNSLIRRKRLMEVQNLVKQDETKPWS 228
Query: 2313 RDTQAKLGCRXXXXXXETAFVLXXXXXXXXXXXDIRPAFKHRFKISTKDPG*SILR 2146
R TQAKLG R ETA+V D+RPAF+H FK TK+PG I++
Sbjct: 229 RGTQAKLGSRLIELLTETAYVQPPVNQSEDIPPDVRPAFRHIFKTLTKNPGQKIVK 284
>sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymerase 3, chloroplastic; AltName:
Full=NsRpoT-C; AltName: Full=T7 bacteriophage-type single
subunit RNA polymerase 3; Flags: Precursor
gi|59800203|sp|P69243.1|RPO3A_TOBAC RecName:
Full=DNA-directed RNA polymerase 3A, chloroplastic;
AltName: Full=NictaRpoT3-syl; AltName: Full=T7
bacteriophage-type single subunit RNA polymerase 3A;
Flags: Precursor gi|21425641|emb|CAC82576.3| phage-type
RNA polymerase [Nicotiana sylvestris]
gi|21425679|emb|CAC95027.2| plastid RNA polymerase
[Nicotiana tabacum] gi|24475541|dbj|BAC22693.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris] gi|24475543|dbj|BAC22694.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 977
Score = 905 bits (2340), Expect(2) = 0.0
Identities = 436/542 (80%), Positives = 486/542 (89%)
Frame = -1
Query: 2140 AIVKKYGVIECDPLVLDGLDRTVKHAIIPYVPMLVPPRKWKGYDKGGYLFLPSYLMRTHG 1961
+IVKKYGVIECDPLV+ G+DRTVK +IPYVPMLVPP+KW+GYDKGGYLFLPSYLMRTHG
Sbjct: 377 SIVKKYGVIECDPLVVAGVDRTVKQMMIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHG 436
Query: 1960 SKRQQTAVKDVPPNQLQKVYEALDTLGNTKWRVNRRILSIVEDLWAGGGNIGGLVNRNDV 1781
S+RQQ AV+ VP Q+Q+VYEALDTLG+TKWRVN+RILS+VE +WAGGGNI GLV+R DV
Sbjct: 437 SRRQQDAVRSVPTKQMQQVYEALDTLGSTKWRVNKRILSVVESIWAGGGNIAGLVDRKDV 496
Query: 1780 SLPELDSDDVEDIXXXXXXXXXXXKINQERHSLRCDVELKLSVARKMRDEEGFYYPHNLD 1601
+PEL SDD+ ++ KINQE HS RCD ELKLSVARK++DEEGFYYPHNLD
Sbjct: 497 PIPELHSDDIMEVKKWKWRVRKSKKINQELHSQRCDTELKLSVARKLKDEEGFYYPHNLD 556
Query: 1600 FRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYGGGVEKLPYDDR 1421
FRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGL WLKIHLA+LY GG+EKL YD R
Sbjct: 557 FRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLASLYAGGIEKLCYDAR 616
Query: 1420 LAFVENHLNDILDSANNSLNGKRWWLHAEDPFQCLAACINLSEAIKSSSPYTVISHLPIH 1241
LAFVENH++DILDSANN LNG RWWL+AEDPFQCLAACINLSEA+KSSSP+TV SHLPIH
Sbjct: 617 LAFVENHIDDILDSANNPLNGNRWWLNAEDPFQCLAACINLSEALKSSSPHTVFSHLPIH 676
Query: 1240 QDGSCNGLQHYAALGRDTMEAVAVNLVARDTPADVYSEIAFRVHDIMKRDSIKDPETNPN 1061
QDGSCNGLQHYAALGRD+MEA AVNLVA D PADVY+EIA RV I++ DSIKDP T+PN
Sbjct: 677 QDGSCNGLQHYAALGRDSMEAAAVNLVAGDKPADVYTEIALRVDHIIRGDSIKDPATDPN 736
Query: 1060 AMLAKILVDQVDRKLVKQTVMTSVYGVTFIGAREQIKKRLEEKGLITDDRLLFSAACYTA 881
A+LAK+L+DQVDRKLVKQTVMTSVYGVT++GAREQIK+RLEEKGLI DDRLLF+A+CY A
Sbjct: 737 ALLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAA 796
Query: 880 KVTLTALGEIFQAARGIMGWLGDCAKVIAAEDQPVKWTTPLGLPVVQPYFKTQRHVIRTS 701
KVTL ALGE+FQAARG M WLGDCAKVIA+E+QPV+WTTPLGLPVVQPYFKTQRHVIRTS
Sbjct: 797 KVTLAALGELFQAARGTMTWLGDCAKVIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTS 856
Query: 700 LQVLALQREGISVEGRKQKTAFPPNFVHSLDGSHMMMTAVACRDAGLRFAGICFGNFVFY 521
LQVLALQREG +VE RKQ+TAFPPNFVHSLDGSHMMMTAVACRDAGL+FAG+ +
Sbjct: 857 LQVLALQREGDTVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLQFAGVHDSFWTHA 916
Query: 520 CD 515
CD
Sbjct: 917 CD 918
Score = 121 bits (304), Expect(2) = 0.0
Identities = 65/116 (56%), Positives = 83/116 (71%)
Frame = -2
Query: 2493 IHSFLEKTRKEQKSAAVNKDGEDFAIEKMILRRRVKSLIRKNRLVEVQKLVKSEAVKSWG 2314
IH+FLEKT+K QK + ED + E MILR+RVKSLI++NR+VEV+KL+KSE +SWG
Sbjct: 265 IHNFLEKTKKLQKHMTGAQSQEDMSRETMILRKRVKSLIKRNRVVEVRKLMKSEEPESWG 324
Query: 2313 RDTQAKLGCRXXXXXXETAFVLXXXXXXXXXXXDIRPAFKHRFKISTKDPG*SILR 2146
RDTQAKLGCR ETA+V DIRPAF+H F+I+T+DPG SI++
Sbjct: 325 RDTQAKLGCRLLELLTETAYVQPPVDQSADTPPDIRPAFRHVFRIATRDPGKSIVK 380
Score = 131 bits (329), Expect = 1e-27
Identities = 62/75 (82%), Positives = 65/75 (86%)
Frame = -2
Query: 489 LNAIGVHDSFWTHACDVDKMNRILREKFVELYSMPILENLLESFQTSHPTLNFPSLPKTG 310
L GVHDSFWTHACDVD+MNRILREKFVELYSMPILE+LLESFQ S+P L FP LPK G
Sbjct: 903 LQFAGVHDSFWTHACDVDQMNRILREKFVELYSMPILEDLLESFQNSYPALTFPPLPKRG 962
Query: 309 DFKLEEVLESPYFFN 265
DF L EVLESPYFFN
Sbjct: 963 DFDLVEVLESPYFFN 977
>sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymerase 3B, chloroplastic; AltName:
Full=NictaRpoT3-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 3B; Flags: Precursor
gi|21425667|emb|CAC95021.2| chloroplast RNA polymerase
[Nicotiana tabacum]
Length = 977
Score = 897 bits (2317), Expect(2) = 0.0
Identities = 434/542 (80%), Positives = 485/542 (89%), Gaps = 1/542 (0%)
Frame = -1
Query: 2137 IVKKYGVIECDPLVLDGLDRTVKHAIIPYVPMLVPPRKWKGYDKGGYLFLPSYLMRTHGS 1958
IVKKYGVIECDPLV+ G+DRTVK +IPYVPMLVPP+KW+GYDKGGYLFLPSYLMRTHGS
Sbjct: 377 IVKKYGVIECDPLVVAGVDRTVKQMMIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGS 436
Query: 1957 KRQQTAVKDVPPNQLQKVYEALDTLGNTKWRVNRRILSIVEDLWAGGGNIGGLVNRNDVS 1778
+RQQ AV+ VP Q+Q+VYEALDTLG+TKWRVN+RIL++VE +WAGGGNI GLV+R DV
Sbjct: 437 RRQQDAVRGVPTKQMQQVYEALDTLGSTKWRVNKRILNVVESIWAGGGNIAGLVDRKDVP 496
Query: 1777 LPEL-DSDDVEDIXXXXXXXXXXXKINQERHSLRCDVELKLSVARKMRDEEGFYYPHNLD 1601
+PEL +SDD+ ++ KINQE HS RCD ELKLSVARK++DEEGFYYPHNLD
Sbjct: 497 IPELSNSDDIMEVKKWKWKVRKSKKINQELHSQRCDTELKLSVARKLKDEEGFYYPHNLD 556
Query: 1600 FRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYGGGVEKLPYDDR 1421
FRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGL WLKIHLA+LY GGVEKL YD R
Sbjct: 557 FRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLASLYAGGVEKLCYDAR 616
Query: 1420 LAFVENHLNDILDSANNSLNGKRWWLHAEDPFQCLAACINLSEAIKSSSPYTVISHLPIH 1241
LAFVENH++DILDSANN LNG RWWL+AEDPFQCLAACINLSEA+KSSSP+TVISHLPIH
Sbjct: 617 LAFVENHIHDILDSANNPLNGNRWWLNAEDPFQCLAACINLSEALKSSSPHTVISHLPIH 676
Query: 1240 QDGSCNGLQHYAALGRDTMEAVAVNLVARDTPADVYSEIAFRVHDIMKRDSIKDPETNPN 1061
QDGSCNGLQHYAALGRD+MEA AVNLVA + PADVY+EIA RV I++ DSIKDP +PN
Sbjct: 677 QDGSCNGLQHYAALGRDSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSIKDPAIDPN 736
Query: 1060 AMLAKILVDQVDRKLVKQTVMTSVYGVTFIGAREQIKKRLEEKGLITDDRLLFSAACYTA 881
A+LAK+L+DQVDRKLVKQTVMTSVYGVT++GAREQIK+RLEEKGLI DDRLLF+A+CY A
Sbjct: 737 ALLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAA 796
Query: 880 KVTLTALGEIFQAARGIMGWLGDCAKVIAAEDQPVKWTTPLGLPVVQPYFKTQRHVIRTS 701
KVTL ALGE+FQAARG M WLGDCAKVIA E+QPV+WTTPLGLPVVQPYFKTQRHVIRTS
Sbjct: 797 KVTLAALGELFQAARGTMTWLGDCAKVIALENQPVRWTTPLGLPVVQPYFKTQRHVIRTS 856
Query: 700 LQVLALQREGISVEGRKQKTAFPPNFVHSLDGSHMMMTAVACRDAGLRFAGICFGNFVFY 521
LQ+LALQREG +VE RKQ+TAFPPNFVHSLDGSHMMMTAVACRDAGL+FAG+ +
Sbjct: 857 LQILALQREGDAVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLQFAGVHDSFWTHA 916
Query: 520 CD 515
CD
Sbjct: 917 CD 918
Score = 121 bits (304), Expect(2) = 0.0
Identities = 65/116 (56%), Positives = 83/116 (71%)
Frame = -2
Query: 2493 IHSFLEKTRKEQKSAAVNKDGEDFAIEKMILRRRVKSLIRKNRLVEVQKLVKSEAVKSWG 2314
IH+FLEKT+K QK + ED + E MILR+RVKSLI++NR+VEV+KL+KSE +SWG
Sbjct: 264 IHNFLEKTKKLQKHMTGAQSQEDMSKETMILRKRVKSLIKRNRVVEVRKLMKSEEPESWG 323
Query: 2313 RDTQAKLGCRXXXXXXETAFVLXXXXXXXXXXXDIRPAFKHRFKISTKDPG*SILR 2146
RDTQAKLGCR ETA+V DIRPAF+H FKI+T+DPG +I++
Sbjct: 324 RDTQAKLGCRLLELLTETAYVQRPVDQSADTPPDIRPAFRHVFKIATRDPGKNIVK 379
Score = 129 bits (325), Expect = 3e-27
Identities = 60/75 (80%), Positives = 65/75 (86%)
Frame = -2
Query: 489 LNAIGVHDSFWTHACDVDKMNRILREKFVELYSMPILENLLESFQTSHPTLNFPSLPKTG 310
L GVHDSFWTHACDVD+MNRILREKFVELYS+PILE+LLE+FQ S+P L FP LPK G
Sbjct: 903 LQFAGVHDSFWTHACDVDQMNRILREKFVELYSLPILEDLLENFQKSYPALTFPPLPKRG 962
Query: 309 DFKLEEVLESPYFFN 265
DF L EVLESPYFFN
Sbjct: 963 DFNLREVLESPYFFN 977
>ref|XP_002308414.1| predicted protein [Populus trichocarpa] gi|222854390|gb|EEE91937.1|
predicted protein [Populus trichocarpa]
Length = 982
Score = 886 bits (2290), Expect(2) = 0.0
Identities = 430/561 (76%), Positives = 487/561 (86%), Gaps = 1/561 (0%)
Frame = -1
Query: 2224 QST*YPTCI*TSFQNFYKRSWVINIEKHAIVKKYGVIECDPLVLDGLDRTVKHAIIPYVP 2045
QS P + +F++ +K V VKKYGVIECDPL+L GLD T KH +IPY P
Sbjct: 355 QSEGIPPDVRPAFRHIFKS--VTKNPGQKTVKKYGVIECDPLILTGLDGTAKHMLIPYFP 412
Query: 2044 MLVPPRKWKGYDKGGYLFLPSYLMRTHGSKRQQTAVKDVPPNQLQKVYEALDTLGNTKWR 1865
MLVPP+KW+GYDKGG+LFLPSY+MRTHGS++QQ AV+ VP Q+QKV+EALDTLGNTKWR
Sbjct: 413 MLVPPKKWRGYDKGGHLFLPSYIMRTHGSRQQQDAVRSVPGKQMQKVFEALDTLGNTKWR 472
Query: 1864 VNRRILSIVEDLWAGGGNIGGLVNRNDVSLPE-LDSDDVEDIXXXXXXXXXXXKINQERH 1688
VN ++L +VE +WA GGN GLVNR D+ +PE L SDD+ +I KINQERH
Sbjct: 473 VNGKVLDVVERIWASGGNNAGLVNRGDIPIPEKLSSDDLTEIQKWKWSVRKAKKINQERH 532
Query: 1687 SLRCDVELKLSVARKMRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRP 1508
S RCD ELKLSVARK++DEEGFYYPHNLDFRGRAYPMHPHL HLSSDLCRG+LEFAEGRP
Sbjct: 533 SQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGVLEFAEGRP 592
Query: 1507 LGKSGLHWLKIHLANLYGGGVEKLPYDDRLAFVENHLNDILDSANNSLNGKRWWLHAEDP 1328
LGKSGL WLKIHLANLY GGVEKL +D RLAFVENHL++I DSA N +NGKRWWL AEDP
Sbjct: 593 LGKSGLCWLKIHLANLYSGGVEKLSHDGRLAFVENHLSEIFDSAENPVNGKRWWLTAEDP 652
Query: 1327 FQCLAACINLSEAIKSSSPYTVISHLPIHQDGSCNGLQHYAALGRDTMEAVAVNLVARDT 1148
FQCLAACINLSEA+KS+SP+TVISHLPIHQDGSCNGLQHYAALGRD+ EA AVNLVA +
Sbjct: 653 FQCLAACINLSEALKSASPHTVISHLPIHQDGSCNGLQHYAALGRDSQEAAAVNLVAAEK 712
Query: 1147 PADVYSEIAFRVHDIMKRDSIKDPETNPNAMLAKILVDQVDRKLVKQTVMTSVYGVTFIG 968
P+DVYSEIA RVH+I++RDS KDP TNP+A+LAK+L+D+VDRKLVKQTVMTSVYGVT++G
Sbjct: 713 PSDVYSEIATRVHEIIRRDSNKDPATNPHALLAKVLIDEVDRKLVKQTVMTSVYGVTYVG 772
Query: 967 AREQIKKRLEEKGLITDDRLLFSAACYTAKVTLTALGEIFQAARGIMGWLGDCAKVIAAE 788
AREQIK+RLEEKG ITDDR+LFSAACY AKVTLTALGE+FQAAR IMGWLGDCAKVIA+E
Sbjct: 773 AREQIKRRLEEKGHITDDRVLFSAACYAAKVTLTALGELFQAARDIMGWLGDCAKVIASE 832
Query: 787 DQPVKWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGISVEGRKQKTAFPPNFVHSLD 608
DQPV+WTTPLGLPVVQPY+KTQRH+IRTSLQVLALQREG SV+ RKQ+TAFPPNFVHSLD
Sbjct: 833 DQPVRWTTPLGLPVVQPYYKTQRHLIRTSLQVLALQREGSSVQVRKQRTAFPPNFVHSLD 892
Query: 607 GSHMMMTAVACRDAGLRFAGI 545
GSHMMMTAVACRDA LRFAG+
Sbjct: 893 GSHMMMTAVACRDADLRFAGV 913
Score = 125 bits (313), Expect(2) = 0.0
Identities = 59/75 (78%), Positives = 64/75 (85%)
Frame = -2
Query: 489 LNAIGVHDSFWTHACDVDKMNRILREKFVELYSMPILENLLESFQTSHPTLNFPSLPKTG 310
L GVHDSFWTHA D D MNRILREKFVELY+MPILENLLE FQTS+PTL FPSLP+ G
Sbjct: 908 LRFAGVHDSFWTHARDADLMNRILREKFVELYNMPILENLLEDFQTSYPTLKFPSLPERG 967
Query: 309 DFKLEEVLESPYFFN 265
+F L+EVL SPYFFN
Sbjct: 968 NFDLQEVLRSPYFFN 982
Score = 93.6 bits (231), Expect = 2e-16
Identities = 52/111 (46%), Positives = 66/111 (59%)
Frame = -2
Query: 2493 IHSFLEKTRKEQKSAAVNKDGEDFAIEKMILRRRVKSLIRKNRLVEVQKLVKSEAVKSWG 2314
IH+FLEKT+ Q+ ++ E EK +LR+RV SLIR+ RL+EVQ LV + K W
Sbjct: 269 IHNFLEKTKNHQRKKTMHDVQESMDKEKEMLRKRVNSLIRRKRLMEVQNLVIQDETKPWN 328
Query: 2313 RDTQAKLGCRXXXXXXETAFVLXXXXXXXXXXXDIRPAFKHRFKISTKDPG 2161
RD QAKLG R ETA+V D+RPAF+H FK TK+PG
Sbjct: 329 RDKQAKLGSRLIELLTETAYVQPPVDQSEGIPPDVRPAFRHIFKSVTKNPG 379
>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
vinifera]
Length = 979
Score = 880 bits (2275), Expect(2) = 0.0
Identities = 426/540 (78%), Positives = 478/540 (88%), Gaps = 1/540 (0%)
Frame = -1
Query: 2131 KKYGVIECDPLVLDGLDRTVKHAIIPYVPMLVPPRKWKGYDKGGYLFLPSYLMRTHGSKR 1952
+KYGVIECDPLVL GLDRT KH +IPYVPML+PP+KWKGYDKGGYLFLPSY+MRTHGS++
Sbjct: 381 RKYGVIECDPLVLIGLDRTAKHMVIPYVPMLIPPKKWKGYDKGGYLFLPSYVMRTHGSRK 440
Query: 1951 QQTAVKDVPPNQLQKVYEALDTLGNTKWRVNRRILSIVEDLWAGGGNIGGLVNRNDVSLP 1772
QQ AVK VP QLQKV+EALDTLGNTKWR+NRR+LS+VE +WA GGN+GGLV+R +V LP
Sbjct: 441 QQDAVKSVPRRQLQKVFEALDTLGNTKWRINRRVLSVVESIWARGGNLGGLVDRENVPLP 500
Query: 1771 ELDS-DDVEDIXXXXXXXXXXXKINQERHSLRCDVELKLSVARKMRDEEGFYYPHNLDFR 1595
E S +D+ +I KINQERHSLRCD E+KLSVARKM+DEEGFYYPHNLDFR
Sbjct: 501 EKPSTEDLTEIQNWKWNARKAKKINQERHSLRCDTEIKLSVARKMKDEEGFYYPHNLDFR 560
Query: 1594 GRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYGGGVEKLPYDDRLA 1415
GRAYPMHPHLNHLSSDLCRG+LEFAEGRPLGKSGL WLKI LANLY GGVEKL YD RLA
Sbjct: 561 GRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIQLANLYAGGVEKLSYDGRLA 620
Query: 1414 FVENHLNDILDSANNSLNGKRWWLHAEDPFQCLAACINLSEAIKSSSPYTVISHLPIHQD 1235
FV+NHL+D+ DSA+N LNG RWWL AEDPFQCLAACINLSEA++SSSP+TVISHLPIHQD
Sbjct: 621 FVDNHLDDVFDSADNPLNGNRWWLTAEDPFQCLAACINLSEALRSSSPHTVISHLPIHQD 680
Query: 1234 GSCNGLQHYAALGRDTMEAVAVNLVARDTPADVYSEIAFRVHDIMKRDSIKDPETNPNAM 1055
GSCNGLQHYAALGR+++EA AVNLVA + PADVYSEIA RVH+IMKRDS KDP T+P A+
Sbjct: 681 GSCNGLQHYAALGRNSLEASAVNLVAGEKPADVYSEIAARVHEIMKRDSNKDPATDPKAL 740
Query: 1054 LAKILVDQVDRKLVKQTVMTSVYGVTFIGAREQIKKRLEEKGLITDDRLLFSAACYTAKV 875
LAK+L+ QVDRKLVKQTVMTSVYGVT+IGAREQIK+RL EKGLITD+RLLF+AACY AKV
Sbjct: 741 LAKVLIGQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLAEKGLITDERLLFTAACYAAKV 800
Query: 874 TLTALGEIFQAARGIMGWLGDCAKVIAAEDQPVKWTTPLGLPVVQPYFKTQRHVIRTSLQ 695
TL ALGEIFQAAR IM WLG+CAKVIA+E+QPV+WTTPLGLPV+QPY K++RH+IRTSLQ
Sbjct: 801 TLAALGEIFQAARDIMAWLGECAKVIASENQPVQWTTPLGLPVIQPYCKSERHLIRTSLQ 860
Query: 694 VLALQREGISVEGRKQKTAFPPNFVHSLDGSHMMMTAVACRDAGLRFAGICFGNFVFYCD 515
VLALQREG V RKQ+TAFPPNFVHSLDGSHMMMTAVACRDAGL FAG+ + CD
Sbjct: 861 VLALQREGSVVVIRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWTHACD 920
Score = 100 bits (249), Expect(2) = 0.0
Identities = 56/111 (50%), Positives = 69/111 (62%)
Frame = -2
Query: 2493 IHSFLEKTRKEQKSAAVNKDGEDFAIEKMILRRRVKSLIRKNRLVEVQKLVKSEAVKSWG 2314
IHSFLEKT+ ++ V E EK ILR+RVKS IRK +++EVQKLVK+E + WG
Sbjct: 267 IHSFLEKTKNFERHKTVGHSQEGLR-EKEILRKRVKSFIRKKKIIEVQKLVKNEEITPWG 325
Query: 2313 RDTQAKLGCRXXXXXXETAFVLXXXXXXXXXXXDIRPAFKHRFKISTKDPG 2161
RDTQAKLG R ETA+V D+RPAF+H FK TK+ G
Sbjct: 326 RDTQAKLGSRLIELLTETAYVQTPVNQSADCPPDVRPAFRHTFKTVTKESG 376
Score = 135 bits (340), Expect = 5e-29
Identities = 63/71 (88%), Positives = 65/71 (91%)
Frame = -2
Query: 477 GVHDSFWTHACDVDKMNRILREKFVELYSMPILENLLESFQTSHPTLNFPSLPKTGDFKL 298
GVHDSFWTHACDVDKMN+ILREKFVELYSMPILENLLESFQTSHPTL FP LP G+F L
Sbjct: 909 GVHDSFWTHACDVDKMNQILREKFVELYSMPILENLLESFQTSHPTLTFPPLPDRGNFDL 968
Query: 297 EEVLESPYFFN 265
EVLESPYFFN
Sbjct: 969 REVLESPYFFN 979