BLASTX nr result

ID: Lithospermum22_contig00010046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00010046
         (2494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325119.1| predicted protein [Populus trichocarpa] gi|2...   888   0.0  
sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymeras...   905   0.0  
sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymeras...   897   0.0  
ref|XP_002308414.1| predicted protein [Populus trichocarpa] gi|2...   886   0.0  
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   880   0.0  

>ref|XP_002325119.1| predicted protein [Populus trichocarpa] gi|222866553|gb|EEF03684.1|
            predicted protein [Populus trichocarpa]
          Length = 882

 Score =  888 bits (2294), Expect(3) = 0.0
 Identities = 425/532 (79%), Positives = 476/532 (89%), Gaps = 1/532 (0%)
 Frame = -1

Query: 2137 IVKKYGVIECDPLVLDGLDRTVKHAIIPYVPMLVPPRKWKGYDKGGYLFLPSYLMRTHGS 1958
            IVKKYGVIECDPL+L GLD T KH +IPY PMLVPP+KWKGYDKGG+LFLPSY+MRTHGS
Sbjct: 282  IVKKYGVIECDPLILTGLDGTAKHMLIPYFPMLVPPKKWKGYDKGGHLFLPSYVMRTHGS 341

Query: 1957 KRQQTAVKDVPPNQLQKVYEALDTLGNTKWRVNRRILSIVEDLWAGGGNIGGLVNRNDVS 1778
            ++QQ AV+ VP  Q+QKV+EALDTLGNTKWRVNRR+L +VE +W  GGNI GLV+R D+ 
Sbjct: 342  RQQQVAVRSVPGKQMQKVFEALDTLGNTKWRVNRRLLDVVERIWTSGGNIAGLVDREDIP 401

Query: 1777 LPEL-DSDDVEDIXXXXXXXXXXXKINQERHSLRCDVELKLSVARKMRDEEGFYYPHNLD 1601
            +PE   SDD+ +I           KINQERHS RCD ELKLSVARK++DEEGFYYPHNLD
Sbjct: 402  IPEKPSSDDLTEIQKWKWSVRKAKKINQERHSQRCDTELKLSVARKLKDEEGFYYPHNLD 461

Query: 1600 FRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYGGGVEKLPYDDR 1421
            FRGRAYPMHPHL HLSSDLCRG+LEF EGRPLGKSGL WLKIHLANLY GGVEKL +D R
Sbjct: 462  FRGRAYPMHPHLTHLSSDLCRGVLEFEEGRPLGKSGLRWLKIHLANLYSGGVEKLSHDGR 521

Query: 1420 LAFVENHLNDILDSANNSLNGKRWWLHAEDPFQCLAACINLSEAIKSSSPYTVISHLPIH 1241
            LAFVENHL++I DSA N +NGKRWWL AEDPFQCLAACINLSEA+ S+SP+TVISHLPIH
Sbjct: 522  LAFVENHLSEIFDSAKNPVNGKRWWLKAEDPFQCLAACINLSEALNSASPHTVISHLPIH 581

Query: 1240 QDGSCNGLQHYAALGRDTMEAVAVNLVARDTPADVYSEIAFRVHDIMKRDSIKDPETNPN 1061
            QDGSCNGLQHYAALGRDT+EA AVNLVA + P+DVYSEIA RVH+I++RDS KDP TNP+
Sbjct: 582  QDGSCNGLQHYAALGRDTLEAAAVNLVAAEKPSDVYSEIAVRVHEIIRRDSNKDPATNPH 641

Query: 1060 AMLAKILVDQVDRKLVKQTVMTSVYGVTFIGAREQIKKRLEEKGLITDDRLLFSAACYTA 881
            A+LAKILVDQVDRKLVKQTVMTSVYGVT++GAREQIK+RLEEKG ITDDRLLFSAACYTA
Sbjct: 642  ALLAKILVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGHITDDRLLFSAACYTA 701

Query: 880  KVTLTALGEIFQAARGIMGWLGDCAKVIAAEDQPVKWTTPLGLPVVQPYFKTQRHVIRTS 701
            KVTLTALGE+FQAAR IM WLGDCAK+IA+EDQPV+WTTPLGLPVVQPY+KT+RH+I+TS
Sbjct: 702  KVTLTALGELFQAARDIMSWLGDCAKIIASEDQPVQWTTPLGLPVVQPYYKTERHLIKTS 761

Query: 700  LQVLALQREGISVEGRKQKTAFPPNFVHSLDGSHMMMTAVACRDAGLRFAGI 545
            LQ+LALQREG SV+ RKQ+TAFPPNFVHSLDGSHMMMTAVACRDAGL FAG+
Sbjct: 762  LQILALQREGSSVQVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGV 813



 Score =  123 bits (309), Expect(3) = 0.0
 Identities = 57/71 (80%), Positives = 63/71 (88%)
 Frame = -2

Query: 477  GVHDSFWTHACDVDKMNRILREKFVELYSMPILENLLESFQTSHPTLNFPSLPKTGDFKL 298
            GVHDSFWTHA DVD MNRILREKFVELY+MPILENLLE FQTS+PTL FP LP+ G+F L
Sbjct: 812  GVHDSFWTHATDVDLMNRILREKFVELYNMPILENLLEDFQTSYPTLQFPPLPERGNFDL 871

Query: 297  EEVLESPYFFN 265
            ++VL SPYFFN
Sbjct: 872  QKVLRSPYFFN 882



 Score = 98.2 bits (243), Expect(3) = 0.0
 Identities = 54/116 (46%), Positives = 71/116 (61%)
 Frame = -2

Query: 2493 IHSFLEKTRKEQKSAAVNKDGEDFAIEKMILRRRVKSLIRKNRLVEVQKLVKSEAVKSWG 2314
            IH+FLEKT+  Q+   +++  E    EK +LR+RV SLIR+ RL+EVQ LVK +  K W 
Sbjct: 169  IHNFLEKTKNYQRKKTMHEVQETMDKEKEVLRKRVNSLIRRKRLMEVQNLVKQDETKPWS 228

Query: 2313 RDTQAKLGCRXXXXXXETAFVLXXXXXXXXXXXDIRPAFKHRFKISTKDPG*SILR 2146
            R TQAKLG R      ETA+V            D+RPAF+H FK  TK+PG  I++
Sbjct: 229  RGTQAKLGSRLIELLTETAYVQPPVNQSEDIPPDVRPAFRHIFKTLTKNPGQKIVK 284


>sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymerase 3, chloroplastic; AltName:
            Full=NsRpoT-C; AltName: Full=T7 bacteriophage-type single
            subunit RNA polymerase 3; Flags: Precursor
            gi|59800203|sp|P69243.1|RPO3A_TOBAC RecName:
            Full=DNA-directed RNA polymerase 3A, chloroplastic;
            AltName: Full=NictaRpoT3-syl; AltName: Full=T7
            bacteriophage-type single subunit RNA polymerase 3A;
            Flags: Precursor gi|21425641|emb|CAC82576.3| phage-type
            RNA polymerase [Nicotiana sylvestris]
            gi|21425679|emb|CAC95027.2| plastid RNA polymerase
            [Nicotiana tabacum] gi|24475541|dbj|BAC22693.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris] gi|24475543|dbj|BAC22694.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris]
          Length = 977

 Score =  905 bits (2340), Expect(2) = 0.0
 Identities = 436/542 (80%), Positives = 486/542 (89%)
 Frame = -1

Query: 2140 AIVKKYGVIECDPLVLDGLDRTVKHAIIPYVPMLVPPRKWKGYDKGGYLFLPSYLMRTHG 1961
            +IVKKYGVIECDPLV+ G+DRTVK  +IPYVPMLVPP+KW+GYDKGGYLFLPSYLMRTHG
Sbjct: 377  SIVKKYGVIECDPLVVAGVDRTVKQMMIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHG 436

Query: 1960 SKRQQTAVKDVPPNQLQKVYEALDTLGNTKWRVNRRILSIVEDLWAGGGNIGGLVNRNDV 1781
            S+RQQ AV+ VP  Q+Q+VYEALDTLG+TKWRVN+RILS+VE +WAGGGNI GLV+R DV
Sbjct: 437  SRRQQDAVRSVPTKQMQQVYEALDTLGSTKWRVNKRILSVVESIWAGGGNIAGLVDRKDV 496

Query: 1780 SLPELDSDDVEDIXXXXXXXXXXXKINQERHSLRCDVELKLSVARKMRDEEGFYYPHNLD 1601
             +PEL SDD+ ++           KINQE HS RCD ELKLSVARK++DEEGFYYPHNLD
Sbjct: 497  PIPELHSDDIMEVKKWKWRVRKSKKINQELHSQRCDTELKLSVARKLKDEEGFYYPHNLD 556

Query: 1600 FRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYGGGVEKLPYDDR 1421
            FRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGL WLKIHLA+LY GG+EKL YD R
Sbjct: 557  FRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLASLYAGGIEKLCYDAR 616

Query: 1420 LAFVENHLNDILDSANNSLNGKRWWLHAEDPFQCLAACINLSEAIKSSSPYTVISHLPIH 1241
            LAFVENH++DILDSANN LNG RWWL+AEDPFQCLAACINLSEA+KSSSP+TV SHLPIH
Sbjct: 617  LAFVENHIDDILDSANNPLNGNRWWLNAEDPFQCLAACINLSEALKSSSPHTVFSHLPIH 676

Query: 1240 QDGSCNGLQHYAALGRDTMEAVAVNLVARDTPADVYSEIAFRVHDIMKRDSIKDPETNPN 1061
            QDGSCNGLQHYAALGRD+MEA AVNLVA D PADVY+EIA RV  I++ DSIKDP T+PN
Sbjct: 677  QDGSCNGLQHYAALGRDSMEAAAVNLVAGDKPADVYTEIALRVDHIIRGDSIKDPATDPN 736

Query: 1060 AMLAKILVDQVDRKLVKQTVMTSVYGVTFIGAREQIKKRLEEKGLITDDRLLFSAACYTA 881
            A+LAK+L+DQVDRKLVKQTVMTSVYGVT++GAREQIK+RLEEKGLI DDRLLF+A+CY A
Sbjct: 737  ALLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAA 796

Query: 880  KVTLTALGEIFQAARGIMGWLGDCAKVIAAEDQPVKWTTPLGLPVVQPYFKTQRHVIRTS 701
            KVTL ALGE+FQAARG M WLGDCAKVIA+E+QPV+WTTPLGLPVVQPYFKTQRHVIRTS
Sbjct: 797  KVTLAALGELFQAARGTMTWLGDCAKVIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTS 856

Query: 700  LQVLALQREGISVEGRKQKTAFPPNFVHSLDGSHMMMTAVACRDAGLRFAGICFGNFVFY 521
            LQVLALQREG +VE RKQ+TAFPPNFVHSLDGSHMMMTAVACRDAGL+FAG+    +   
Sbjct: 857  LQVLALQREGDTVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLQFAGVHDSFWTHA 916

Query: 520  CD 515
            CD
Sbjct: 917  CD 918



 Score =  121 bits (304), Expect(2) = 0.0
 Identities = 65/116 (56%), Positives = 83/116 (71%)
 Frame = -2

Query: 2493 IHSFLEKTRKEQKSAAVNKDGEDFAIEKMILRRRVKSLIRKNRLVEVQKLVKSEAVKSWG 2314
            IH+FLEKT+K QK     +  ED + E MILR+RVKSLI++NR+VEV+KL+KSE  +SWG
Sbjct: 265  IHNFLEKTKKLQKHMTGAQSQEDMSRETMILRKRVKSLIKRNRVVEVRKLMKSEEPESWG 324

Query: 2313 RDTQAKLGCRXXXXXXETAFVLXXXXXXXXXXXDIRPAFKHRFKISTKDPG*SILR 2146
            RDTQAKLGCR      ETA+V            DIRPAF+H F+I+T+DPG SI++
Sbjct: 325  RDTQAKLGCRLLELLTETAYVQPPVDQSADTPPDIRPAFRHVFRIATRDPGKSIVK 380



 Score =  131 bits (329), Expect = 1e-27
 Identities = 62/75 (82%), Positives = 65/75 (86%)
 Frame = -2

Query: 489  LNAIGVHDSFWTHACDVDKMNRILREKFVELYSMPILENLLESFQTSHPTLNFPSLPKTG 310
            L   GVHDSFWTHACDVD+MNRILREKFVELYSMPILE+LLESFQ S+P L FP LPK G
Sbjct: 903  LQFAGVHDSFWTHACDVDQMNRILREKFVELYSMPILEDLLESFQNSYPALTFPPLPKRG 962

Query: 309  DFKLEEVLESPYFFN 265
            DF L EVLESPYFFN
Sbjct: 963  DFDLVEVLESPYFFN 977


>sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymerase 3B, chloroplastic; AltName:
            Full=NictaRpoT3-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 3B; Flags: Precursor
            gi|21425667|emb|CAC95021.2| chloroplast RNA polymerase
            [Nicotiana tabacum]
          Length = 977

 Score =  897 bits (2317), Expect(2) = 0.0
 Identities = 434/542 (80%), Positives = 485/542 (89%), Gaps = 1/542 (0%)
 Frame = -1

Query: 2137 IVKKYGVIECDPLVLDGLDRTVKHAIIPYVPMLVPPRKWKGYDKGGYLFLPSYLMRTHGS 1958
            IVKKYGVIECDPLV+ G+DRTVK  +IPYVPMLVPP+KW+GYDKGGYLFLPSYLMRTHGS
Sbjct: 377  IVKKYGVIECDPLVVAGVDRTVKQMMIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGS 436

Query: 1957 KRQQTAVKDVPPNQLQKVYEALDTLGNTKWRVNRRILSIVEDLWAGGGNIGGLVNRNDVS 1778
            +RQQ AV+ VP  Q+Q+VYEALDTLG+TKWRVN+RIL++VE +WAGGGNI GLV+R DV 
Sbjct: 437  RRQQDAVRGVPTKQMQQVYEALDTLGSTKWRVNKRILNVVESIWAGGGNIAGLVDRKDVP 496

Query: 1777 LPEL-DSDDVEDIXXXXXXXXXXXKINQERHSLRCDVELKLSVARKMRDEEGFYYPHNLD 1601
            +PEL +SDD+ ++           KINQE HS RCD ELKLSVARK++DEEGFYYPHNLD
Sbjct: 497  IPELSNSDDIMEVKKWKWKVRKSKKINQELHSQRCDTELKLSVARKLKDEEGFYYPHNLD 556

Query: 1600 FRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYGGGVEKLPYDDR 1421
            FRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGL WLKIHLA+LY GGVEKL YD R
Sbjct: 557  FRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLASLYAGGVEKLCYDAR 616

Query: 1420 LAFVENHLNDILDSANNSLNGKRWWLHAEDPFQCLAACINLSEAIKSSSPYTVISHLPIH 1241
            LAFVENH++DILDSANN LNG RWWL+AEDPFQCLAACINLSEA+KSSSP+TVISHLPIH
Sbjct: 617  LAFVENHIHDILDSANNPLNGNRWWLNAEDPFQCLAACINLSEALKSSSPHTVISHLPIH 676

Query: 1240 QDGSCNGLQHYAALGRDTMEAVAVNLVARDTPADVYSEIAFRVHDIMKRDSIKDPETNPN 1061
            QDGSCNGLQHYAALGRD+MEA AVNLVA + PADVY+EIA RV  I++ DSIKDP  +PN
Sbjct: 677  QDGSCNGLQHYAALGRDSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSIKDPAIDPN 736

Query: 1060 AMLAKILVDQVDRKLVKQTVMTSVYGVTFIGAREQIKKRLEEKGLITDDRLLFSAACYTA 881
            A+LAK+L+DQVDRKLVKQTVMTSVYGVT++GAREQIK+RLEEKGLI DDRLLF+A+CY A
Sbjct: 737  ALLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAA 796

Query: 880  KVTLTALGEIFQAARGIMGWLGDCAKVIAAEDQPVKWTTPLGLPVVQPYFKTQRHVIRTS 701
            KVTL ALGE+FQAARG M WLGDCAKVIA E+QPV+WTTPLGLPVVQPYFKTQRHVIRTS
Sbjct: 797  KVTLAALGELFQAARGTMTWLGDCAKVIALENQPVRWTTPLGLPVVQPYFKTQRHVIRTS 856

Query: 700  LQVLALQREGISVEGRKQKTAFPPNFVHSLDGSHMMMTAVACRDAGLRFAGICFGNFVFY 521
            LQ+LALQREG +VE RKQ+TAFPPNFVHSLDGSHMMMTAVACRDAGL+FAG+    +   
Sbjct: 857  LQILALQREGDAVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLQFAGVHDSFWTHA 916

Query: 520  CD 515
            CD
Sbjct: 917  CD 918



 Score =  121 bits (304), Expect(2) = 0.0
 Identities = 65/116 (56%), Positives = 83/116 (71%)
 Frame = -2

Query: 2493 IHSFLEKTRKEQKSAAVNKDGEDFAIEKMILRRRVKSLIRKNRLVEVQKLVKSEAVKSWG 2314
            IH+FLEKT+K QK     +  ED + E MILR+RVKSLI++NR+VEV+KL+KSE  +SWG
Sbjct: 264  IHNFLEKTKKLQKHMTGAQSQEDMSKETMILRKRVKSLIKRNRVVEVRKLMKSEEPESWG 323

Query: 2313 RDTQAKLGCRXXXXXXETAFVLXXXXXXXXXXXDIRPAFKHRFKISTKDPG*SILR 2146
            RDTQAKLGCR      ETA+V            DIRPAF+H FKI+T+DPG +I++
Sbjct: 324  RDTQAKLGCRLLELLTETAYVQRPVDQSADTPPDIRPAFRHVFKIATRDPGKNIVK 379



 Score =  129 bits (325), Expect = 3e-27
 Identities = 60/75 (80%), Positives = 65/75 (86%)
 Frame = -2

Query: 489  LNAIGVHDSFWTHACDVDKMNRILREKFVELYSMPILENLLESFQTSHPTLNFPSLPKTG 310
            L   GVHDSFWTHACDVD+MNRILREKFVELYS+PILE+LLE+FQ S+P L FP LPK G
Sbjct: 903  LQFAGVHDSFWTHACDVDQMNRILREKFVELYSLPILEDLLENFQKSYPALTFPPLPKRG 962

Query: 309  DFKLEEVLESPYFFN 265
            DF L EVLESPYFFN
Sbjct: 963  DFNLREVLESPYFFN 977


>ref|XP_002308414.1| predicted protein [Populus trichocarpa] gi|222854390|gb|EEE91937.1|
            predicted protein [Populus trichocarpa]
          Length = 982

 Score =  886 bits (2290), Expect(2) = 0.0
 Identities = 430/561 (76%), Positives = 487/561 (86%), Gaps = 1/561 (0%)
 Frame = -1

Query: 2224 QST*YPTCI*TSFQNFYKRSWVINIEKHAIVKKYGVIECDPLVLDGLDRTVKHAIIPYVP 2045
            QS   P  +  +F++ +K   V        VKKYGVIECDPL+L GLD T KH +IPY P
Sbjct: 355  QSEGIPPDVRPAFRHIFKS--VTKNPGQKTVKKYGVIECDPLILTGLDGTAKHMLIPYFP 412

Query: 2044 MLVPPRKWKGYDKGGYLFLPSYLMRTHGSKRQQTAVKDVPPNQLQKVYEALDTLGNTKWR 1865
            MLVPP+KW+GYDKGG+LFLPSY+MRTHGS++QQ AV+ VP  Q+QKV+EALDTLGNTKWR
Sbjct: 413  MLVPPKKWRGYDKGGHLFLPSYIMRTHGSRQQQDAVRSVPGKQMQKVFEALDTLGNTKWR 472

Query: 1864 VNRRILSIVEDLWAGGGNIGGLVNRNDVSLPE-LDSDDVEDIXXXXXXXXXXXKINQERH 1688
            VN ++L +VE +WA GGN  GLVNR D+ +PE L SDD+ +I           KINQERH
Sbjct: 473  VNGKVLDVVERIWASGGNNAGLVNRGDIPIPEKLSSDDLTEIQKWKWSVRKAKKINQERH 532

Query: 1687 SLRCDVELKLSVARKMRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRP 1508
            S RCD ELKLSVARK++DEEGFYYPHNLDFRGRAYPMHPHL HLSSDLCRG+LEFAEGRP
Sbjct: 533  SQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGVLEFAEGRP 592

Query: 1507 LGKSGLHWLKIHLANLYGGGVEKLPYDDRLAFVENHLNDILDSANNSLNGKRWWLHAEDP 1328
            LGKSGL WLKIHLANLY GGVEKL +D RLAFVENHL++I DSA N +NGKRWWL AEDP
Sbjct: 593  LGKSGLCWLKIHLANLYSGGVEKLSHDGRLAFVENHLSEIFDSAENPVNGKRWWLTAEDP 652

Query: 1327 FQCLAACINLSEAIKSSSPYTVISHLPIHQDGSCNGLQHYAALGRDTMEAVAVNLVARDT 1148
            FQCLAACINLSEA+KS+SP+TVISHLPIHQDGSCNGLQHYAALGRD+ EA AVNLVA + 
Sbjct: 653  FQCLAACINLSEALKSASPHTVISHLPIHQDGSCNGLQHYAALGRDSQEAAAVNLVAAEK 712

Query: 1147 PADVYSEIAFRVHDIMKRDSIKDPETNPNAMLAKILVDQVDRKLVKQTVMTSVYGVTFIG 968
            P+DVYSEIA RVH+I++RDS KDP TNP+A+LAK+L+D+VDRKLVKQTVMTSVYGVT++G
Sbjct: 713  PSDVYSEIATRVHEIIRRDSNKDPATNPHALLAKVLIDEVDRKLVKQTVMTSVYGVTYVG 772

Query: 967  AREQIKKRLEEKGLITDDRLLFSAACYTAKVTLTALGEIFQAARGIMGWLGDCAKVIAAE 788
            AREQIK+RLEEKG ITDDR+LFSAACY AKVTLTALGE+FQAAR IMGWLGDCAKVIA+E
Sbjct: 773  AREQIKRRLEEKGHITDDRVLFSAACYAAKVTLTALGELFQAARDIMGWLGDCAKVIASE 832

Query: 787  DQPVKWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGISVEGRKQKTAFPPNFVHSLD 608
            DQPV+WTTPLGLPVVQPY+KTQRH+IRTSLQVLALQREG SV+ RKQ+TAFPPNFVHSLD
Sbjct: 833  DQPVRWTTPLGLPVVQPYYKTQRHLIRTSLQVLALQREGSSVQVRKQRTAFPPNFVHSLD 892

Query: 607  GSHMMMTAVACRDAGLRFAGI 545
            GSHMMMTAVACRDA LRFAG+
Sbjct: 893  GSHMMMTAVACRDADLRFAGV 913



 Score =  125 bits (313), Expect(2) = 0.0
 Identities = 59/75 (78%), Positives = 64/75 (85%)
 Frame = -2

Query: 489  LNAIGVHDSFWTHACDVDKMNRILREKFVELYSMPILENLLESFQTSHPTLNFPSLPKTG 310
            L   GVHDSFWTHA D D MNRILREKFVELY+MPILENLLE FQTS+PTL FPSLP+ G
Sbjct: 908  LRFAGVHDSFWTHARDADLMNRILREKFVELYNMPILENLLEDFQTSYPTLKFPSLPERG 967

Query: 309  DFKLEEVLESPYFFN 265
            +F L+EVL SPYFFN
Sbjct: 968  NFDLQEVLRSPYFFN 982



 Score = 93.6 bits (231), Expect = 2e-16
 Identities = 52/111 (46%), Positives = 66/111 (59%)
 Frame = -2

Query: 2493 IHSFLEKTRKEQKSAAVNKDGEDFAIEKMILRRRVKSLIRKNRLVEVQKLVKSEAVKSWG 2314
            IH+FLEKT+  Q+   ++   E    EK +LR+RV SLIR+ RL+EVQ LV  +  K W 
Sbjct: 269  IHNFLEKTKNHQRKKTMHDVQESMDKEKEMLRKRVNSLIRRKRLMEVQNLVIQDETKPWN 328

Query: 2313 RDTQAKLGCRXXXXXXETAFVLXXXXXXXXXXXDIRPAFKHRFKISTKDPG 2161
            RD QAKLG R      ETA+V            D+RPAF+H FK  TK+PG
Sbjct: 329  RDKQAKLGSRLIELLTETAYVQPPVDQSEGIPPDVRPAFRHIFKSVTKNPG 379


>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
            vinifera]
          Length = 979

 Score =  880 bits (2275), Expect(2) = 0.0
 Identities = 426/540 (78%), Positives = 478/540 (88%), Gaps = 1/540 (0%)
 Frame = -1

Query: 2131 KKYGVIECDPLVLDGLDRTVKHAIIPYVPMLVPPRKWKGYDKGGYLFLPSYLMRTHGSKR 1952
            +KYGVIECDPLVL GLDRT KH +IPYVPML+PP+KWKGYDKGGYLFLPSY+MRTHGS++
Sbjct: 381  RKYGVIECDPLVLIGLDRTAKHMVIPYVPMLIPPKKWKGYDKGGYLFLPSYVMRTHGSRK 440

Query: 1951 QQTAVKDVPPNQLQKVYEALDTLGNTKWRVNRRILSIVEDLWAGGGNIGGLVNRNDVSLP 1772
            QQ AVK VP  QLQKV+EALDTLGNTKWR+NRR+LS+VE +WA GGN+GGLV+R +V LP
Sbjct: 441  QQDAVKSVPRRQLQKVFEALDTLGNTKWRINRRVLSVVESIWARGGNLGGLVDRENVPLP 500

Query: 1771 ELDS-DDVEDIXXXXXXXXXXXKINQERHSLRCDVELKLSVARKMRDEEGFYYPHNLDFR 1595
            E  S +D+ +I           KINQERHSLRCD E+KLSVARKM+DEEGFYYPHNLDFR
Sbjct: 501  EKPSTEDLTEIQNWKWNARKAKKINQERHSLRCDTEIKLSVARKMKDEEGFYYPHNLDFR 560

Query: 1594 GRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYGGGVEKLPYDDRLA 1415
            GRAYPMHPHLNHLSSDLCRG+LEFAEGRPLGKSGL WLKI LANLY GGVEKL YD RLA
Sbjct: 561  GRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIQLANLYAGGVEKLSYDGRLA 620

Query: 1414 FVENHLNDILDSANNSLNGKRWWLHAEDPFQCLAACINLSEAIKSSSPYTVISHLPIHQD 1235
            FV+NHL+D+ DSA+N LNG RWWL AEDPFQCLAACINLSEA++SSSP+TVISHLPIHQD
Sbjct: 621  FVDNHLDDVFDSADNPLNGNRWWLTAEDPFQCLAACINLSEALRSSSPHTVISHLPIHQD 680

Query: 1234 GSCNGLQHYAALGRDTMEAVAVNLVARDTPADVYSEIAFRVHDIMKRDSIKDPETNPNAM 1055
            GSCNGLQHYAALGR+++EA AVNLVA + PADVYSEIA RVH+IMKRDS KDP T+P A+
Sbjct: 681  GSCNGLQHYAALGRNSLEASAVNLVAGEKPADVYSEIAARVHEIMKRDSNKDPATDPKAL 740

Query: 1054 LAKILVDQVDRKLVKQTVMTSVYGVTFIGAREQIKKRLEEKGLITDDRLLFSAACYTAKV 875
            LAK+L+ QVDRKLVKQTVMTSVYGVT+IGAREQIK+RL EKGLITD+RLLF+AACY AKV
Sbjct: 741  LAKVLIGQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLAEKGLITDERLLFTAACYAAKV 800

Query: 874  TLTALGEIFQAARGIMGWLGDCAKVIAAEDQPVKWTTPLGLPVVQPYFKTQRHVIRTSLQ 695
            TL ALGEIFQAAR IM WLG+CAKVIA+E+QPV+WTTPLGLPV+QPY K++RH+IRTSLQ
Sbjct: 801  TLAALGEIFQAARDIMAWLGECAKVIASENQPVQWTTPLGLPVIQPYCKSERHLIRTSLQ 860

Query: 694  VLALQREGISVEGRKQKTAFPPNFVHSLDGSHMMMTAVACRDAGLRFAGICFGNFVFYCD 515
            VLALQREG  V  RKQ+TAFPPNFVHSLDGSHMMMTAVACRDAGL FAG+    +   CD
Sbjct: 861  VLALQREGSVVVIRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWTHACD 920



 Score =  100 bits (249), Expect(2) = 0.0
 Identities = 56/111 (50%), Positives = 69/111 (62%)
 Frame = -2

Query: 2493 IHSFLEKTRKEQKSAAVNKDGEDFAIEKMILRRRVKSLIRKNRLVEVQKLVKSEAVKSWG 2314
            IHSFLEKT+  ++   V    E    EK ILR+RVKS IRK +++EVQKLVK+E +  WG
Sbjct: 267  IHSFLEKTKNFERHKTVGHSQEGLR-EKEILRKRVKSFIRKKKIIEVQKLVKNEEITPWG 325

Query: 2313 RDTQAKLGCRXXXXXXETAFVLXXXXXXXXXXXDIRPAFKHRFKISTKDPG 2161
            RDTQAKLG R      ETA+V            D+RPAF+H FK  TK+ G
Sbjct: 326  RDTQAKLGSRLIELLTETAYVQTPVNQSADCPPDVRPAFRHTFKTVTKESG 376



 Score =  135 bits (340), Expect = 5e-29
 Identities = 63/71 (88%), Positives = 65/71 (91%)
 Frame = -2

Query: 477  GVHDSFWTHACDVDKMNRILREKFVELYSMPILENLLESFQTSHPTLNFPSLPKTGDFKL 298
            GVHDSFWTHACDVDKMN+ILREKFVELYSMPILENLLESFQTSHPTL FP LP  G+F L
Sbjct: 909  GVHDSFWTHACDVDKMNQILREKFVELYSMPILENLLESFQTSHPTLTFPPLPDRGNFDL 968

Query: 297  EEVLESPYFFN 265
             EVLESPYFFN
Sbjct: 969  REVLESPYFFN 979


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