BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00010021
         (799 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149143.1| PREDICTED: probable DNA-directed RNA polymer...   145   1e-32
ref|XP_002274208.1| PREDICTED: DNA-directed RNA polymerases I, I...   129   7e-28
gb|ACF06506.1| RNA polymerase [Elaeis guineensis]                     128   2e-27
ref|XP_001758014.1| predicted protein [Physcomitrella patens sub...   127   2e-27
ref|XP_002975900.1| hypothetical protein SELMODRAFT_104121 [Sela...   127   3e-27

>ref|XP_004149143.1| PREDICTED: probable DNA-directed RNA polymerases I, II, and III
           subunit RPABC3-like [Cucumis sativus]
           gi|449509097|ref|XP_004163492.1| PREDICTED: probable
           DNA-directed RNA polymerases I, II, and III subunit
           RPABC3-like [Cucumis sativus]
          Length = 146

 Score =  145 bits (366), Expect = 1e-32
 Identities = 79/142 (55%), Positives = 103/142 (72%)
 Frame = +1

Query: 172 FDDIIEVSNEDVLEKKYDKVSRIAAHNQDGDVEILLEVNTELYPIQKEEKLRMLLSHTLY 351
           F+DI +V   +   KKYDKVSRI A ++   + +LL+VNTE+YPI + EKL M+LS TL 
Sbjct: 6   FNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLN 65

Query: 352 ADGSAVTSHFPKEKQRSLADKFEYVMHGLTYKMTLDPKESAGALKVEVYISFGGLQLMLK 531
            DGS VTS+  +E ++SLADKFEY+MHG TYK  L  + S   LKVEVY SFGGLQ++LK
Sbjct: 66  YDGSPVTSYKDQEGKKSLADKFEYIMHGKTYK--LSDEGSGSDLKVEVYASFGGLQMLLK 123

Query: 532 GPVEKMSKFKVDQKLFVLLRKM 597
           G     +KF+VDQ +F+LLRK+
Sbjct: 124 GDPIHCAKFRVDQNMFLLLRKL 145


>ref|XP_002274208.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC3 [Vitis vinifera] gi|296084254|emb|CBI24642.3|
           unnamed protein product [Vitis vinifera]
          Length = 145

 Score =  129 bits (324), Expect = 7e-28
 Identities = 68/148 (45%), Positives = 104/148 (70%), Gaps = 1/148 (0%)
 Frame = +1

Query: 157 MDDFHFDDIIEVSNEDVLEKKYDKVSRIAAHNQDGDVEILLEVNTELYPIQKEEKLRMLL 336
           M +  FDDI  V  +D   KK+DKVSRI A ++  D+ + L+VN E YPIQ  EK RM+L
Sbjct: 1   MVETFFDDIFVVDGQDPGGKKFDKVSRIEASSEQYDMFMQLDVNIEAYPIQAGEKFRMVL 60

Query: 337 SHTLYADGSAVTSHFPKEKQRSLADKFEYVMHGLTYKMTLDPKESAGA-LKVEVYISFGG 513
           + TL+ DG+ VT +F + +Q+SLADKF+YVM+G+ YK++    E +G  +K  +Y SFGG
Sbjct: 61  APTLHLDGADVTDYFTQGEQKSLADKFDYVMYGIIYKVS---NEGSGPDVKGVIYASFGG 117

Query: 514 LQLMLKGPVEKMSKFKVDQKLFVLLRKM 597
           L ++LKG    ++K +V+++LF+L++K+
Sbjct: 118 LLMILKGDPSNLNKLEVNKRLFLLMKKV 145


>gb|ACF06506.1| RNA polymerase [Elaeis guineensis]
          Length = 145

 Score =  128 bits (321), Expect = 2e-27
 Identities = 67/148 (45%), Positives = 104/148 (70%), Gaps = 1/148 (0%)
 Frame = +1

Query: 157 MDDFHFDDIIEVSNEDVLEKKYDKVSRIAAHNQDGDVEILLEVNTELYPIQKEEKLRMLL 336
           M +  F+DI  ++  D   KK+DKVSRI A ++  D+ + L+VNTE+YP+   +K  M+L
Sbjct: 1   MVELLFEDIFTLTRIDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLHVGDKFTMVL 60

Query: 337 SHTLYADGSAVTSHFPKEKQRSLADKFEYVMHGLTYKMTLDPKESAGA-LKVEVYISFGG 513
           + TL  DG+  + ++ + +++SLADKFEYVMHG  YK++   +ES+G  +KVE+Y SFGG
Sbjct: 61  APTLSLDGTPDSGYYMQGQRKSLADKFEYVMHGKLYKIS---EESSGPNVKVEIYASFGG 117

Query: 514 LQLMLKGPVEKMSKFKVDQKLFVLLRKM 597
           L +MLKG     + F++DQ+LF+L+RK+
Sbjct: 118 LLMMLKGDPSNATNFELDQRLFLLMRKV 145


>ref|XP_001758014.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162690891|gb|EDQ77256.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 147

 Score =  127 bits (320), Expect = 2e-27
 Identities = 64/146 (43%), Positives = 95/146 (65%)
 Frame = +1

Query: 160 DDFHFDDIIEVSNEDVLEKKYDKVSRIAAHNQDGDVEILLEVNTELYPIQKEEKLRMLLS 339
           D   F+DI  +S  D   KK+DKVSRI AH++  D+++LL+VN ++YP+ K EK  + L+
Sbjct: 3   DTLLFEDIFTISQLDPDGKKFDKVSRIVAHSEQFDMDVLLDVNIDIYPLHKGEKFTLALA 62

Query: 340 HTLYADGSAVTSHFPKEKQRSLADKFEYVMHGLTYKMTLDPKESAGALKVEVYISFGGLQ 519
            TL  DG+     F +  ++SLADK+EYVM+G  YK      ES G  KVE Y+SFGGL 
Sbjct: 63  STLSLDGTMDDGTFDQSNRKSLADKYEYVMYGKVYKYA--DTESKGPPKVETYVSFGGLL 120

Query: 520 LMLKGPVEKMSKFKVDQKLFVLLRKM 597
           + LKG    ++   +DQ++++L+RK+
Sbjct: 121 MCLKGDPNNLNSLVLDQRVYLLMRKV 146


>ref|XP_002975900.1| hypothetical protein SELMODRAFT_104121 [Selaginella moellendorffii]
           gi|300156176|gb|EFJ22805.1| hypothetical protein
           SELMODRAFT_104121 [Selaginella moellendorffii]
          Length = 147

 Score =  127 bits (319), Expect = 3e-27
 Identities = 64/143 (44%), Positives = 99/143 (69%), Gaps = 1/143 (0%)
 Frame = +1

Query: 172 FDDIIEVSNEDVLEKKYDK-VSRIAAHNQDGDVEILLEVNTELYPIQKEEKLRMLLSHTL 348
           F+DI  ++  D   KK+DK VSRI A ++  D++++L+VN ++YPI + +K  + LS TL
Sbjct: 7   FEDIFTITGIDTDGKKFDKAVSRIEARSEQFDMQLVLDVNIDVYPIARTDKFTLALSSTL 66

Query: 349 YADGSAVTSHFPKEKQRSLADKFEYVMHGLTYKMTLDPKESAGALKVEVYISFGGLQLML 528
             DG+     F + +++SLADK+EYVM+G  YK   D  ES GA+K+ VY+SFGGL +ML
Sbjct: 67  RLDGTPDDGVFDQSRKKSLADKYEYVMYGKLYK--YDDDESGGAIKIGVYVSFGGLLMML 124

Query: 529 KGPVEKMSKFKVDQKLFVLLRKM 597
           KG  + +   K+DQ+L++L+RK+
Sbjct: 125 KGDKQHLGNLKLDQRLYLLMRKV 147