BLASTX nr result
ID: Lithospermum22_contig00010014
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00010014 (386 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002297693.1| predicted protein [Populus trichocarpa] gi|1... 119 3e-25 ref|NP_173069.1| serinc-domain containing protein [Arabidopsis t... 118 6e-25 ref|XP_002890152.1| TMS membrane family protein [Arabidopsis lyr... 118 6e-25 ref|XP_002512768.1| Membrane protein PB1A10.07c, putative [Ricin... 118 6e-25 ref|XP_002304839.1| predicted protein [Populus trichocarpa] gi|2... 117 7e-25 >ref|XP_002297693.1| predicted protein [Populus trichocarpa] gi|118488403|gb|ABK96018.1| unknown [Populus trichocarpa] gi|222844951|gb|EEE82498.1| predicted protein [Populus trichocarpa] Length = 414 Score = 119 bits (297), Expect = 3e-25 Identities = 56/59 (94%), Positives = 57/59 (96%) Frame = +1 Query: 208 VVSGISRRSARIAYCGLFALSLIVSWILREVAAPMMEHIPWINHFQKTPDREWFETDAV 384 VVSGISRRSARIAYCGLFALSLIVSWILREVAAP+ME IPWINHF KTPDREWFETDAV Sbjct: 22 VVSGISRRSARIAYCGLFALSLIVSWILREVAAPLMEQIPWINHFHKTPDREWFETDAV 80 >ref|NP_173069.1| serinc-domain containing protein [Arabidopsis thaliana] gi|334182610|ref|NP_001185008.1| serinc-domain containing protein [Arabidopsis thaliana] gi|6587821|gb|AAF18512.1|AC010924_25 Contains similarity to gb|AF181686 membrane protein TMS1d from Drosophila melanogaster. ESTs gb|R64994, gb|AI994832, gb|Z47674 come from this gene [Arabidopsis thaliana] gi|332191295|gb|AEE29416.1| serinc-domain containing protein [Arabidopsis thaliana] gi|332191296|gb|AEE29417.1| serinc-domain containing protein [Arabidopsis thaliana] Length = 412 Score = 118 bits (295), Expect = 6e-25 Identities = 55/61 (90%), Positives = 58/61 (95%) Frame = +1 Query: 202 QAVVSGISRRSARIAYCGLFALSLIVSWILREVAAPMMEHIPWINHFQKTPDREWFETDA 381 + VVSGISRRSARIAYCGLFALSLIVSWILREVAAP+ME +PWINHF KTPDREWFETDA Sbjct: 20 RTVVSGISRRSARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFHKTPDREWFETDA 79 Query: 382 V 384 V Sbjct: 80 V 80 >ref|XP_002890152.1| TMS membrane family protein [Arabidopsis lyrata subsp. lyrata] gi|297335994|gb|EFH66411.1| TMS membrane family protein [Arabidopsis lyrata subsp. lyrata] Length = 412 Score = 118 bits (295), Expect = 6e-25 Identities = 55/61 (90%), Positives = 58/61 (95%) Frame = +1 Query: 202 QAVVSGISRRSARIAYCGLFALSLIVSWILREVAAPMMEHIPWINHFQKTPDREWFETDA 381 + VVSGISRRSARIAYCGLFALSLIVSWILREVAAP+ME +PWINHF KTPDREWFETDA Sbjct: 20 RTVVSGISRRSARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFHKTPDREWFETDA 79 Query: 382 V 384 V Sbjct: 80 V 80 >ref|XP_002512768.1| Membrane protein PB1A10.07c, putative [Ricinus communis] gi|223547779|gb|EEF49271.1| Membrane protein PB1A10.07c, putative [Ricinus communis] Length = 413 Score = 118 bits (295), Expect = 6e-25 Identities = 55/61 (90%), Positives = 58/61 (95%) Frame = +1 Query: 202 QAVVSGISRRSARIAYCGLFALSLIVSWILREVAAPMMEHIPWINHFQKTPDREWFETDA 381 + VVSGISRRSARIAYCGLFALSLIVSWILREVAAP+ME +PWINHF KTPDREWFETDA Sbjct: 20 RTVVSGISRRSARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFHKTPDREWFETDA 79 Query: 382 V 384 V Sbjct: 80 V 80 >ref|XP_002304839.1| predicted protein [Populus trichocarpa] gi|222842271|gb|EEE79818.1| predicted protein [Populus trichocarpa] Length = 415 Score = 117 bits (294), Expect = 7e-25 Identities = 55/59 (93%), Positives = 57/59 (96%) Frame = +1 Query: 208 VVSGISRRSARIAYCGLFALSLIVSWILREVAAPMMEHIPWINHFQKTPDREWFETDAV 384 VVSGISRRSARIAYCGLFALSLIVSWILREVAAP+ME +PWINHF KTPDREWFETDAV Sbjct: 22 VVSGISRRSARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFHKTPDREWFETDAV 80