BLASTX nr result

ID: Lithospermum22_contig00010014 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00010014
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297693.1| predicted protein [Populus trichocarpa] gi|1...   119   3e-25
ref|NP_173069.1| serinc-domain containing protein [Arabidopsis t...   118   6e-25
ref|XP_002890152.1| TMS membrane family protein [Arabidopsis lyr...   118   6e-25
ref|XP_002512768.1| Membrane protein PB1A10.07c, putative [Ricin...   118   6e-25
ref|XP_002304839.1| predicted protein [Populus trichocarpa] gi|2...   117   7e-25

>ref|XP_002297693.1| predicted protein [Populus trichocarpa] gi|118488403|gb|ABK96018.1|
           unknown [Populus trichocarpa]
           gi|222844951|gb|EEE82498.1| predicted protein [Populus
           trichocarpa]
          Length = 414

 Score =  119 bits (297), Expect = 3e-25
 Identities = 56/59 (94%), Positives = 57/59 (96%)
 Frame = +1

Query: 208 VVSGISRRSARIAYCGLFALSLIVSWILREVAAPMMEHIPWINHFQKTPDREWFETDAV 384
           VVSGISRRSARIAYCGLFALSLIVSWILREVAAP+ME IPWINHF KTPDREWFETDAV
Sbjct: 22  VVSGISRRSARIAYCGLFALSLIVSWILREVAAPLMEQIPWINHFHKTPDREWFETDAV 80


>ref|NP_173069.1| serinc-domain containing protein [Arabidopsis thaliana]
           gi|334182610|ref|NP_001185008.1| serinc-domain
           containing protein [Arabidopsis thaliana]
           gi|6587821|gb|AAF18512.1|AC010924_25 Contains similarity
           to gb|AF181686 membrane protein TMS1d from Drosophila
           melanogaster. ESTs gb|R64994, gb|AI994832, gb|Z47674
           come from this gene [Arabidopsis thaliana]
           gi|332191295|gb|AEE29416.1| serinc-domain containing
           protein [Arabidopsis thaliana]
           gi|332191296|gb|AEE29417.1| serinc-domain containing
           protein [Arabidopsis thaliana]
          Length = 412

 Score =  118 bits (295), Expect = 6e-25
 Identities = 55/61 (90%), Positives = 58/61 (95%)
 Frame = +1

Query: 202 QAVVSGISRRSARIAYCGLFALSLIVSWILREVAAPMMEHIPWINHFQKTPDREWFETDA 381
           + VVSGISRRSARIAYCGLFALSLIVSWILREVAAP+ME +PWINHF KTPDREWFETDA
Sbjct: 20  RTVVSGISRRSARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFHKTPDREWFETDA 79

Query: 382 V 384
           V
Sbjct: 80  V 80


>ref|XP_002890152.1| TMS membrane family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335994|gb|EFH66411.1| TMS membrane family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 412

 Score =  118 bits (295), Expect = 6e-25
 Identities = 55/61 (90%), Positives = 58/61 (95%)
 Frame = +1

Query: 202 QAVVSGISRRSARIAYCGLFALSLIVSWILREVAAPMMEHIPWINHFQKTPDREWFETDA 381
           + VVSGISRRSARIAYCGLFALSLIVSWILREVAAP+ME +PWINHF KTPDREWFETDA
Sbjct: 20  RTVVSGISRRSARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFHKTPDREWFETDA 79

Query: 382 V 384
           V
Sbjct: 80  V 80


>ref|XP_002512768.1| Membrane protein PB1A10.07c, putative [Ricinus communis]
           gi|223547779|gb|EEF49271.1| Membrane protein PB1A10.07c,
           putative [Ricinus communis]
          Length = 413

 Score =  118 bits (295), Expect = 6e-25
 Identities = 55/61 (90%), Positives = 58/61 (95%)
 Frame = +1

Query: 202 QAVVSGISRRSARIAYCGLFALSLIVSWILREVAAPMMEHIPWINHFQKTPDREWFETDA 381
           + VVSGISRRSARIAYCGLFALSLIVSWILREVAAP+ME +PWINHF KTPDREWFETDA
Sbjct: 20  RTVVSGISRRSARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFHKTPDREWFETDA 79

Query: 382 V 384
           V
Sbjct: 80  V 80


>ref|XP_002304839.1| predicted protein [Populus trichocarpa] gi|222842271|gb|EEE79818.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score =  117 bits (294), Expect = 7e-25
 Identities = 55/59 (93%), Positives = 57/59 (96%)
 Frame = +1

Query: 208 VVSGISRRSARIAYCGLFALSLIVSWILREVAAPMMEHIPWINHFQKTPDREWFETDAV 384
           VVSGISRRSARIAYCGLFALSLIVSWILREVAAP+ME +PWINHF KTPDREWFETDAV
Sbjct: 22  VVSGISRRSARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFHKTPDREWFETDAV 80


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