BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00010000
         (925 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containi...   227   3e-57
ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containi...   227   3e-57
ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containi...   226   6e-57
ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containi...   226   8e-57
emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]   225   1e-56

>ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial [Vitis vinifera]
          Length = 383

 Score =  227 bits (579), Expect = 3e-57
 Identities = 114/265 (43%), Positives = 166/265 (62%), Gaps = 1/265 (0%)
 Frame = +3

Query: 3   VFDELPQLGCTRTVLSFNALLSACVKSKNLDKVNKIFHKLPGELGFEPDGFSYSTVIKAF 182
           VFDE+P   C R+VLSFNALL ACV SK  DKV   F +LP +L  EPD  SY+ VIK  
Sbjct: 116 VFDEMPDQKCERSVLSFNALLGACVHSKKFDKVEGFFSELPSKLSVEPDLVSYNIVIKGL 175

Query: 183 CEFKDFDSAMKVLEEMEGSRIGPNIVGYNTILEAYYRENNLVEAEKLWRRMEGKGVIADV 362
           C+    DSA+ +L+EME   + P+++ +NT+L   Y     ++ EK+W RME K ++ D+
Sbjct: 176 CDMGSMDSAVGMLDEMEKKSLEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEKKNILPDI 235

Query: 363 RSYNAKLRNLIRND-RVEEALDLVEKMVIIQVKPDKFTYNAVIKGCVGKSKLEEVKMFHG 539
           RSYNAKL  L+ ++ R+ E + LVE+M    +KPD +++NA+IKG     K++E   ++G
Sbjct: 236 RSYNAKLVGLVSSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDEATNWYG 295

Query: 540 KMVGDDCDPDYVTFEMLISFACDQGDIDFAFEVCKQAIELKVSVYKSSMQLVVDALLERS 719
           KM  +DC PD +TF  L+   C++G  D AFE+CK+    K  V +  +Q  VD L++  
Sbjct: 296 KMRENDCSPDKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGLVKGG 355

Query: 720 RIEEANELVALINSSKRHPYTLTLP 794
           ++ EA +LV L NS+    Y L +P
Sbjct: 356 KVVEAKKLVQLGNSNSYRRYNLKIP 380


>ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial-like [Vitis vinifera]
          Length = 382

 Score =  227 bits (579), Expect = 3e-57
 Identities = 113/264 (42%), Positives = 163/264 (61%)
 Frame = +3

Query: 3   VFDELPQLGCTRTVLSFNALLSACVKSKNLDKVNKIFHKLPGELGFEPDGFSYSTVIKAF 182
           VFDE+P   C R+VLSFNALL ACV SK  DKV   F +LP +L  EPD  SY+ VI   
Sbjct: 116 VFDEMPDQKCERSVLSFNALLGACVNSKKFDKVEGFFSELPSKLSVEPDLVSYNIVINGL 175

Query: 183 CEFKDFDSAMKVLEEMEGSRIGPNIVGYNTILEAYYRENNLVEAEKLWRRMEGKGVIADV 362
           C+    DSA+ +L+EME   + P+++ +NT+L   Y     ++ EK+W RME K ++ D+
Sbjct: 176 CDMGSMDSAVGMLDEMEKKSLEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEKKNILPDI 235

Query: 363 RSYNAKLRNLIRNDRVEEALDLVEKMVIIQVKPDKFTYNAVIKGCVGKSKLEEVKMFHGK 542
           RSYNAKL  L+   R+ E + LVE+M    +KPD +++NA+IKG     K++E   ++GK
Sbjct: 236 RSYNAKLVGLVSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDEATNWYGK 295

Query: 543 MVGDDCDPDYVTFEMLISFACDQGDIDFAFEVCKQAIELKVSVYKSSMQLVVDALLERSR 722
           M  +DC PD +TF  L+   C++G  D AFE+CK+    K  V +  +Q  VD L++  +
Sbjct: 296 MRENDCLPDKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGLVKGGK 355

Query: 723 IEEANELVALINSSKRHPYTLTLP 794
           + EA +LV L NS+    Y L +P
Sbjct: 356 VVEAKKLVQLGNSNSYRRYNLKIP 379


>ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
           mitochondrial-like [Vitis vinifera]
          Length = 379

 Score =  226 bits (576), Expect = 6e-57
 Identities = 112/264 (42%), Positives = 170/264 (64%)
 Frame = +3

Query: 3   VFDELPQLGCTRTVLSFNALLSACVKSKNLDKVNKIFHKLPGELGFEPDGFSYSTVIKAF 182
           +FDELP+L C RTV+SFNALLSACV SK  DK++  F +LPG LG  PD  SY+ ++ AF
Sbjct: 114 LFDELPKLNCERTVMSFNALLSACVNSKKFDKIDGFFQELPGNLGIVPDVVSYNILVNAF 173

Query: 183 CEFKDFDSAMKVLEEMEGSRIGPNIVGYNTILEAYYRENNLVEAEKLWRRMEGKGVIADV 362
           CE    DSA+ VL+EME   + P+++ +NT+L A+Y+  +  + EK+W  M+   V  +V
Sbjct: 174 CEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNV 233

Query: 363 RSYNAKLRNLIRNDRVEEALDLVEKMVIIQVKPDKFTYNAVIKGCVGKSKLEEVKMFHGK 542
           RSYNAKLR +I  +R+ EA++L+++M    +KPD FT N+++KG      LEE K ++ +
Sbjct: 234 RSYNAKLRGVISENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSE 293

Query: 543 MVGDDCDPDYVTFEMLISFACDQGDIDFAFEVCKQAIELKVSVYKSSMQLVVDALLERSR 722
           +  ++  P   T+  LI F  ++GD + A E+CK+    +  +  + +Q V++ L++ S+
Sbjct: 294 IARNELPPVRATYMTLIPFLVEKGDFEMATELCKEVCSRRWLIEPALLQQVLEGLVKESK 353

Query: 723 IEEANELVALINSSKRHPYTLTLP 794
           IEEA ELV L    K+   TL LP
Sbjct: 354 IEEATELVEL-EKLKKFRITLELP 376


>ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13150-like [Vitis vinifera]
          Length = 379

 Score =  226 bits (575), Expect = 8e-57
 Identities = 112/264 (42%), Positives = 169/264 (64%)
 Frame = +3

Query: 3   VFDELPQLGCTRTVLSFNALLSACVKSKNLDKVNKIFHKLPGELGFEPDGFSYSTVIKAF 182
           +FDELP+L C RTV+SFNALLS CV SK  DK++  F +LPG LG  PD  SY+ ++ AF
Sbjct: 114 LFDELPKLNCERTVVSFNALLSVCVNSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAF 173

Query: 183 CEFKDFDSAMKVLEEMEGSRIGPNIVGYNTILEAYYRENNLVEAEKLWRRMEGKGVIADV 362
           CE    DSA+ VL+EME   + P+++ +NT+L A+Y+  +  + EK+W  M+   V  +V
Sbjct: 174 CEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNV 233

Query: 363 RSYNAKLRNLIRNDRVEEALDLVEKMVIIQVKPDKFTYNAVIKGCVGKSKLEEVKMFHGK 542
           RSYNAKLR +I  +R+ EA++L+++M    +KPD FT N+++KG      LEE K ++ +
Sbjct: 234 RSYNAKLRGVISENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSE 293

Query: 543 MVGDDCDPDYVTFEMLISFACDQGDIDFAFEVCKQAIELKVSVYKSSMQLVVDALLERSR 722
           +  ++  P   T+  LI F  ++GD D A E+CK+    +  +  + +Q V++ L++ S+
Sbjct: 294 IARNELPPVRATYMTLIPFLVEKGDFDMATELCKEVCSRRWLIEPALLQQVLEGLVKESK 353

Query: 723 IEEANELVALINSSKRHPYTLTLP 794
           IEEA ELV L    K+   TL LP
Sbjct: 354 IEEATELVELA-KLKKFRITLELP 376


>emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]
          Length = 383

 Score =  225 bits (574), Expect = 1e-56
 Identities = 113/265 (42%), Positives = 165/265 (62%), Gaps = 1/265 (0%)
 Frame = +3

Query: 3   VFDELPQLGCTRTVLSFNALLSACVKSKNLDKVNKIFHKLPGELGFEPDGFSYSTVIKAF 182
           VFDE+P   C R+VLSFN LL ACV SK  DKV   F +LP +L  EPD  SY+ VIK  
Sbjct: 116 VFDEMPDQKCERSVLSFNXLLGACVXSKKFDKVEGFFSELPSKLSVEPDLVSYNIVIKGL 175

Query: 183 CEFKDFDSAMKVLEEMEGSRIGPNIVGYNTILEAYYRENNLVEAEKLWRRMEGKGVIADV 362
           C+    DSA+ +L+EME   + P+++ +NT+L   Y     ++ EK+W RME K ++ D+
Sbjct: 176 CDMGSMDSAVGMLDEMEKKSLEPDLITFNTLLNRXYTSGRFLDGEKIWGRMEKKNILPDI 235

Query: 363 RSYNAKLRNLIRND-RVEEALDLVEKMVIIQVKPDKFTYNAVIKGCVGKSKLEEVKMFHG 539
           RSYNAKL  L+ ++ R+ E + LVE+M    +KPD +++NA+IKG     K++E   ++G
Sbjct: 236 RSYNAKLVGLVSSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDEATNWYG 295

Query: 540 KMVGDDCDPDYVTFEMLISFACDQGDIDFAFEVCKQAIELKVSVYKSSMQLVVDALLERS 719
           KM  +DC PD +TF  L+   C++G  D AFE+CK+    K  V +  +Q  VD L++  
Sbjct: 296 KMRENDCSPDKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGLVKGG 355

Query: 720 RIEEANELVALINSSKRHPYTLTLP 794
           ++ EA +LV L NS+    Y L +P
Sbjct: 356 KVVEAKKLVQLGNSNSYRRYNLKIP 380