BLASTX nr result

ID: Lithospermum22_contig00009906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00009906
         (945 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147682.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   332   1e-88
ref|XP_004161919.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   331   1e-88
ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   319   5e-85
emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]   319   5e-85
emb|CAN82964.1| hypothetical protein VITISV_000345 [Vitis vinifera]   308   1e-81

>ref|XP_004147682.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 383

 Score =  332 bits (850), Expect = 1e-88
 Identities = 162/269 (60%), Positives = 192/269 (71%), Gaps = 1/269 (0%)
 Frame = +2

Query: 140 LKHMSISSPYWCYRCNRFIRVWAQDSVTCPDCNGGFVEEIDAHNQS-SLSESQRRRFMPR 316
           +  M+ +S YWC+RC+ F+RV  QDSV CPDCN GFVE+I+  ++  ++  + RRRF   
Sbjct: 1   MSSMAAASSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAA 60

Query: 317 NPLDFSDGTGPGIVXXXXXXXXXXNTGDRLPFNPVIVLRGPSDXXXXXXXXXXFELYYDD 496
                 + +  G            N GDR PFNPVIVLRGPSD          FELYYDD
Sbjct: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRR-FELYYDD 119

Query: 497 GAGSGLRPLPTSMSEFLLGSGFDRLLDQLAQIEANGIGRMDNPPASKAAIELMPCIDIDE 676
           G GSGLRPLP SMSEFLLGSGFDRLL+QL+QIE NGIGR +NPPASKAAIE MP I I E
Sbjct: 120 GGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICE 179

Query: 677 SHIVTESHCAVCKEVFELGVQVREMPCKHIYHSDCILPWLSLRNSCPVCRHELPADNHDS 856
           +++ TESHCAVCKE FELG + REMPCKHIYH DCILPWLS+RNSCPVCRHELP+DN +S
Sbjct: 180 NYLATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCRHELPSDNQNS 239

Query: 857 EELSRGASDSNNVTGNDDETVGLTIWRLP 943
            + +    +  +VT N +E VGLTIWRLP
Sbjct: 240 LDAAESGENGGSVTSNGEENVGLTIWRLP 268


>ref|XP_004161919.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 380

 Score =  331 bits (849), Expect = 1e-88
 Identities = 162/266 (60%), Positives = 191/266 (71%), Gaps = 1/266 (0%)
 Frame = +2

Query: 149 MSISSPYWCYRCNRFIRVWAQDSVTCPDCNGGFVEEIDAHNQS-SLSESQRRRFMPRNPL 325
           M+ +S YWC+RC+ F+RV  QDSV CPDCN GFVE+I+  ++  ++  + RRRF      
Sbjct: 1   MAAASSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAAAMY 60

Query: 326 DFSDGTGPGIVXXXXXXXXXXNTGDRLPFNPVIVLRGPSDXXXXXXXXXXFELYYDDGAG 505
              + +  G            N GDR PFNPVIVLRGPSD          FELYYDDG G
Sbjct: 61  MIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRR-FELYYDDGGG 119

Query: 506 SGLRPLPTSMSEFLLGSGFDRLLDQLAQIEANGIGRMDNPPASKAAIELMPCIDIDESHI 685
           SGLRPLP SMSEFLLGSGFDRLL+QL+QIE NGIGR +NPPASKAAIE MP I I E+++
Sbjct: 120 SGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICENYL 179

Query: 686 VTESHCAVCKEVFELGVQVREMPCKHIYHSDCILPWLSLRNSCPVCRHELPADNHDSEEL 865
            TESHCAVCKE FELG + REMPCKHIYH DCILPWLS+RNSCPVCRHELP+DN +S + 
Sbjct: 180 ATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCRHELPSDNQNSLDA 239

Query: 866 SRGASDSNNVTGNDDETVGLTIWRLP 943
           +    +  +VT N +E VGLTIWRLP
Sbjct: 240 AESGENGGSVTSNGEENVGLTIWRLP 265


>ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 388

 Score =  319 bits (818), Expect = 5e-85
 Identities = 160/275 (58%), Positives = 190/275 (69%), Gaps = 10/275 (3%)
 Frame = +2

Query: 149 MSISSPYWCYRCNRFIRVWAQDSVTCPDCNGGFVEEIDAHNQSSLSESQRRRF------- 307
           M+ ++ YWC+RC RF+RVWAQDS+ CP C  GF+EEI+A   +  SE+  RRF       
Sbjct: 3   MASTTSYWCHRCTRFVRVWAQDSIVCPYCESGFLEEIEA---TPRSENHHRRFPATAMYM 59

Query: 308 MPRNPLDFSDGTGPGIVXXXXXXXXXXNTGDRLPFNPVIVLRGPSDXXXXXXXXXX---F 478
           +  N  D       G+           N GDR PFNPVIVLRGP+D             F
Sbjct: 60  LGNNRPDSEQSANLGL------RRSRRNAGDRSPFNPVIVLRGPADGGGGEGGVVERSSF 113

Query: 479 ELYYDDGAGSGLRPLPTSMSEFLLGSGFDRLLDQLAQIEANGIGRMDNPPASKAAIELMP 658
           ELYYDDGAGSGLRPLP +MSEFL+GSGFDRLL+QL+QIE NG GR ++PPASKAA+E MP
Sbjct: 114 ELYYDDGAGSGLRPLPATMSEFLMGSGFDRLLEQLSQIEINGFGRGEHPPASKAAVESMP 173

Query: 659 CIDIDESHIVTESHCAVCKEVFELGVQVREMPCKHIYHSDCILPWLSLRNSCPVCRHELP 838
            I+I  SHIVTE HCAVCKE F+LG + REMPCKHIYHSDCILPWLSLRNSCPVCRHELP
Sbjct: 174 TIEIVSSHIVTELHCAVCKEAFQLGSEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELP 233

Query: 839 ADNHDSEELSRGASDSNNVTGNDDETVGLTIWRLP 943
            D   +       +++ +   N++ETVGLTIWRLP
Sbjct: 234 TDVPGTRNSPVSGNEALSPAPNEEETVGLTIWRLP 268


>emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]
          Length = 1218

 Score =  319 bits (818), Expect = 5e-85
 Identities = 160/275 (58%), Positives = 190/275 (69%), Gaps = 10/275 (3%)
 Frame = +2

Query: 149 MSISSPYWCYRCNRFIRVWAQDSVTCPDCNGGFVEEIDAHNQSSLSESQRRRF------- 307
           M+ ++ YWC+RC RF+RVWAQDS+ CP C  GF+EEI+A   +  SE+  RRF       
Sbjct: 113 MASTTSYWCHRCTRFVRVWAQDSIVCPYCESGFLEEIEA---TPRSENHHRRFPATAMYM 169

Query: 308 MPRNPLDFSDGTGPGIVXXXXXXXXXXNTGDRLPFNPVIVLRGPSDXXXXXXXXXX---F 478
           +  N  D       G+           N GDR PFNPVIVLRGP+D             F
Sbjct: 170 LGNNRPDSEQSANLGL------RRSRRNAGDRSPFNPVIVLRGPADGGGGEGGVVERSSF 223

Query: 479 ELYYDDGAGSGLRPLPTSMSEFLLGSGFDRLLDQLAQIEANGIGRMDNPPASKAAIELMP 658
           ELYYDDGAGSGLRPLP +MSEFL+GSGFDRLL+QL+QIE NG GR ++PPASKAA+E MP
Sbjct: 224 ELYYDDGAGSGLRPLPATMSEFLMGSGFDRLLEQLSQIEINGFGRGEHPPASKAAVESMP 283

Query: 659 CIDIDESHIVTESHCAVCKEVFELGVQVREMPCKHIYHSDCILPWLSLRNSCPVCRHELP 838
            I+I  SHIVTE HCAVCKE F+LG + REMPCKHIYHSDCILPWLSLRNSCPVCRHELP
Sbjct: 284 TIEIVSSHIVTELHCAVCKEAFQLGSEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELP 343

Query: 839 ADNHDSEELSRGASDSNNVTGNDDETVGLTIWRLP 943
            D   +       +++ +   N++ETVGLTIWRLP
Sbjct: 344 TDVPGTRNSPVSGTEALSPAPNEEETVGLTIWRLP 378



 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 23/57 (40%), Positives = 34/57 (59%)
 Frame = +2

Query: 692  ESHCAVCKEVFELGVQVREMPCKHIYHSDCILPWLSLRNSCPVCRHELPADNHDSEE 862
            E  C++C E    G  VR +PC H +H++CI PWL  + +CPVC+  + A   +S E
Sbjct: 869  ELTCSICLEQVNRGELVRSLPCLHQFHANCIDPWLRQQGTCPVCKFRVGAGWQESRE 925


>emb|CAN82964.1| hypothetical protein VITISV_000345 [Vitis vinifera]
          Length = 364

 Score =  308 bits (789), Expect = 1e-81
 Identities = 155/266 (58%), Positives = 185/266 (69%), Gaps = 5/266 (1%)
 Frame = +2

Query: 161 SPYWCYRCNRFIRVWAQDSVTCPDCNGGFVEEIDAHNQSSLSESQRRRFMPRNPLDFSDG 340
           S +WCYRCNRFIRVWAQD++ CPDC  GFVE+I+     +LS S RRR +P + +   + 
Sbjct: 6   SSFWCYRCNRFIRVWAQDAILCPDCGSGFVEQIN-----NLSRSPRRRRLPGSAMYLENR 60

Query: 341 TGPGIVXXXXXXXXXXNTGDRLPFNPVIVLRGPSDXXXXXXXXXX-----FELYYDDGAG 505
                           + GDR  FNPVIVLRG +D               FELYYDDG G
Sbjct: 61  NALDQDPVPRIRRARRSGGDRSLFNPVIVLRGSADVNGSEGGGTSGERGNFELYYDDGTG 120

Query: 506 SGLRPLPTSMSEFLLGSGFDRLLDQLAQIEANGIGRMDNPPASKAAIELMPCIDIDESHI 685
           SGLRPLP S+SEFL+GSGFDRLLDQLAQ+E NG GR ++PPASKAA+E +P I I  SH+
Sbjct: 121 SGLRPLPASVSEFLMGSGFDRLLDQLAQLEINGAGRCEHPPASKAAVESLPTIKIVASHV 180

Query: 686 VTESHCAVCKEVFELGVQVREMPCKHIYHSDCILPWLSLRNSCPVCRHELPADNHDSEEL 865
           ++ESHCAVCKE FEL  + RE+PCKHIYHSDCILPWLSLRNSCPVCRHELP D+H+    
Sbjct: 181 LSESHCAVCKEPFELDSEARELPCKHIYHSDCILPWLSLRNSCPVCRHELPTDSHEGG-- 238

Query: 866 SRGASDSNNVTGNDDETVGLTIWRLP 943
           S G   S  +T  +++ VGLTIWRLP
Sbjct: 239 SSGHLQSXGLT--EEDNVGLTIWRLP 262


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