BLASTX nr result

ID: Lithospermum22_contig00009871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00009871
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145818.1| PREDICTED: DNA ligase 1-like [Cucumis sativus]    100   2e-19
ref|XP_002272683.1| PREDICTED: DNA ligase 1 [Vitis vinifera] gi|...   100   2e-19
ref|XP_002464455.1| hypothetical protein SORBIDRAFT_01g018700 [S...    99   3e-19
ref|XP_004160093.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 1...    99   4e-19
ref|XP_002892438.1| ATLIG1 [Arabidopsis lyrata subsp. lyrata] gi...    96   2e-18

>ref|XP_004145818.1| PREDICTED: DNA ligase 1-like [Cucumis sativus]
          Length = 801

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/75 (64%), Positives = 58/75 (77%)
 Frame = -2

Query: 226 SVNELKKKASNFDPKKAAYWGDGERVPFMFVVKGLDAISQVSGRIVMTEILCNMLRTVME 47
           S  ELKKKA +F+ K  A W +GERVPF+F+  G D IS+ S RI +T+I+CNMLRTVM+
Sbjct: 161 STAELKKKAKDFNSKNVACWKEGERVPFLFLCLGFDMISEESSRITITDIVCNMLRTVMD 220

Query: 46  TTPDDLVAFVYLLGN 2
           TTPDDLVA VYLL N
Sbjct: 221 TTPDDLVATVYLLAN 235


>ref|XP_002272683.1| PREDICTED: DNA ligase 1 [Vitis vinifera]
           gi|297734904|emb|CBI17138.3| unnamed protein product
           [Vitis vinifera]
          Length = 723

 Score =  100 bits (248), Expect = 2e-19
 Identities = 47/82 (57%), Positives = 65/82 (79%)
 Frame = -2

Query: 247 RKLSPDESVNELKKKASNFDPKKAAYWGDGERVPFMFVVKGLDAISQVSGRIVMTEILCN 68
           +K+  +E + +L+KKA++F+PK AAYW D + VPF+F+V+  D IS+ +GRIV+T+I+CN
Sbjct: 76  KKVDVEECIGQLRKKAADFNPKTAAYWED-KPVPFLFLVRAFDMISKETGRIVITDIVCN 134

Query: 67  MLRTVMETTPDDLVAFVYLLGN 2
           MLRTVM  TPDDLVA VYL  N
Sbjct: 135 MLRTVMHATPDDLVAVVYLSAN 156


>ref|XP_002464455.1| hypothetical protein SORBIDRAFT_01g018700 [Sorghum bicolor]
           gi|241918309|gb|EER91453.1| hypothetical protein
           SORBIDRAFT_01g018700 [Sorghum bicolor]
          Length = 905

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 50/82 (60%), Positives = 57/82 (69%)
 Frame = -2

Query: 247 RKLSPDESVNELKKKASNFDPKKAAYWGDGERVPFMFVVKGLDAISQVSGRIVMTEILCN 68
           RK     +  ELKKK S FDP  AAYW  GE VPF+F+ + LD IS  SGRIV+TEIL N
Sbjct: 285 RKAEEKNTTLELKKKGSEFDPMAAAYWKPGEPVPFLFLARALDLISNESGRIVITEILSN 344

Query: 67  MLRTVMETTPDDLVAFVYLLGN 2
           + RTVM TTPDDL+A VYL  N
Sbjct: 345 VFRTVMATTPDDLLATVYLSAN 366


>ref|XP_004160093.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 1-like [Cucumis sativus]
          Length = 801

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 48/75 (64%), Positives = 57/75 (76%)
 Frame = -2

Query: 226 SVNELKKKASNFDPKKAAYWGDGERVPFMFVVKGLDAISQVSGRIVMTEILCNMLRTVME 47
           S  ELKKKA +F+ K  A W +GERVPF F+  G D IS+ S RI +T+I+CNMLRTVM+
Sbjct: 161 STAELKKKAKDFNSKNVACWKEGERVPFXFLCLGFDMISEESSRITITDIVCNMLRTVMD 220

Query: 46  TTPDDLVAFVYLLGN 2
           TTPDDLVA VYLL N
Sbjct: 221 TTPDDLVATVYLLAN 235


>ref|XP_002892438.1| ATLIG1 [Arabidopsis lyrata subsp. lyrata]
           gi|297338280|gb|EFH68697.1| ATLIG1 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 793

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 49/89 (55%), Positives = 62/89 (69%), Gaps = 7/89 (7%)
 Frame = -2

Query: 247 RKLSPDESVNE-------LKKKASNFDPKKAAYWGDGERVPFMFVVKGLDAISQVSGRIV 89
           R LS  + ++E       LKKK ++FDP+K + W  GERVPF+F+    D IS  SGRIV
Sbjct: 139 RTLSKTDKIDEMKSKIGLLKKKPNDFDPEKVSCWEKGERVPFLFLALAFDLISNESGRIV 198

Query: 88  MTEILCNMLRTVMETTPDDLVAFVYLLGN 2
           +T+ILCNMLRTV+ TTP+DLVA VYL  N
Sbjct: 199 ITDILCNMLRTVIATTPEDLVATVYLAAN 227


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