BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00009809
         (3121 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   130   4e-55
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...   122   5e-50
ref|XP_002450843.1| hypothetical protein SORBIDRAFT_05g019526 [S...   126   3e-43
gb|ABA96650.1| retrotransposon protein, putative, unclassified [...   122   3e-43
gb|AAX95129.1| retrotransposon protein, putative, unclassified [...   121   1e-41

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  130 bits (327), Expect(3) = 4e-55
 Identities = 73/223 (32%), Positives = 118/223 (52%), Gaps = 6/223 (2%)
 Frame = -2

Query: 1404 FLIETKLRGIE*DTIKRKIKSPNALIVDARG----RK*GFALLWPRDVQVEIKSFSTRHI 1237
            FL ETKL+  E +++K+K+K  + + VD  G    R+ G A+LW  +++V++ S S+ HI
Sbjct: 34   FLSETKLKSYEMESVKKKLKWEHMVAVDCEGECRKRRGGLAMLWRSEIKVQVMSMSSNHI 93

Query: 1236 EAYIRDASSIPWRFVGFYDHHETSKRRHSWNLMRLINGLSTLPTIFMGDFNEVLLSSEHV 1057
            +  + + +   WRF G Y + E   +  +  L+  +   S  P +  GDFN +L++SE  
Sbjct: 94   DIVVGEEAQGEWRFTGIYGYPEEEHKDKTGALLSALARASRRPWLCGGDFNLMLVASEKK 153

Query: 1056 SQRRHRSNWQMEHFLEVVNDCGIFDIEYEGFQFTWCNNFVSPNSTRARLDMGLANQSWKD 877
                  S  + + F   + +C   D+ + G++FTW NN     + + RLD  +AN  WK 
Sbjct: 154  GGDGFNSR-EADIFRNAMEECHFMDLGFVGYEFTWTNNRGGDANIQERLDRFVANDLWKI 212

Query: 876  SFPEARLTHLSTNNSDHFPILLEVESRVQNGARQK--PRFRFE 754
             FP + ++HL    SDH PI+  V+       R K   RFRFE
Sbjct: 213  KFPGSFVSHLPKRKSDHVPIVASVKGAQSAATRTKKSKRFRFE 255



 Score = 77.4 bits (189), Expect(3) = 4e-55
 Identities = 39/119 (32%), Positives = 65/119 (54%)
 Frame = -2

Query: 399 SAQRGKTNLITTLQDEAGNWHKDLVDIHDLATRFYTTLFTSQARGNLTFSGQLLSNQLAV 220
           ++ R + N +  +++EAG W +D  D+ +    ++  LF S     +     ++  Q+  
Sbjct: 368 ASHREQRNNVRRIRNEAGEWFEDEDDVTECFAHYFENLFQSGNNCEMDPILNIVKPQITD 427

Query: 219 EALERMEAIFTNEEVKKCLFSMNGSKAPRPDRMLARFFQHYWATVGDTLCNMVLNFLNN 43
           E   +++A F  EEV   L  M+ +KAP PD M A F+QH+W T+G+ +   VLN LNN
Sbjct: 428 ELGTQLDAPFRREEVSAALAQMHPNKAPGPDGMNALFYQHFWDTIGEDVTTKVLNMLNN 486



 Score = 57.4 bits (137), Expect(3) = 4e-55
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
 Frame = -3

Query: 659 GIHYSRL--ELLKWKRDKLGHVQKSL*EKQEALDRLQQGAITISSKGRATVLAREIDKLR 486
           GI+ +R   +LL W + K GHV K +   Q  +  L +   +  +      L   +D+L 
Sbjct: 279 GINLARTANKLLSWSKQKFGHVAKEIRMCQHQMKVLMESEPSEDNIMHMRALDARMDELE 338

Query: 485 EVDDVYWGQRSRVMWRVKGNKNTSFFH 405
           + ++VYW QRSR  W   G+KNT FFH
Sbjct: 339 KREEVYWHQRSRQDWIKSGDKNTKFFH 365


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score =  122 bits (307), Expect(3) = 5e-50
 Identities = 76/223 (34%), Positives = 112/223 (50%), Gaps = 6/223 (2%)
 Frame = -2

Query: 1404 FLIETKLRGIE*DTIKRKIKSPNALIV----DARGRK*GFALLWPRDVQVEIKSFSTRHI 1237
            FLIETK+   +   +K +++    L V    D  G + G  L W   V V+  S S   I
Sbjct: 312  FLIETKMTEAQMGKLKARLRMDGVLCVGRNEDNGGARGGMCLFWNNKVVVDYISSSFYFI 371

Query: 1236 EAYIRDASSIPWRFVGFYDHHETSKRRHSWNLMRLINGLSTLPTIFMGDFNEVLLSSEHV 1057
             A +        RF GFY H ETS+R  SW+L+R +  + + P +  GDFNE+L  +E  
Sbjct: 372  NAMVTWEDKKKCRFTGFYGHPETSQRHLSWDLLRSLRRVCSEPWLCCGDFNEILDFNEKT 431

Query: 1056 SQRRHRSNWQMEHFLEVVNDCGIFDIEYEGFQFTWCNNFVSPNSTRARLDMGLANQSWKD 877
               + RS  Q++ F   V DCG+++  + GFQ+TW N      + + RLD G  N +   
Sbjct: 432  GAVQ-RSQRQIDGFRHAVEDCGLYEFAFTGFQYTWDNRRKGDANVKERLDRGFGNLALIQ 490

Query: 876  SFPEARLTHLSTNNSDHFPILLEVESRVQNGA--RQKPRFRFE 754
             +      HL + +SDH P+L E +  +  G   R+K RF FE
Sbjct: 491  QWGGISCHHLVSMSSDHCPLLFENDPPMSRGGNWRRKRRFLFE 533



 Score = 77.0 bits (188), Expect(3) = 5e-50
 Identities = 39/129 (30%), Positives = 70/129 (54%)
 Frame = -2

Query: 393  QRGKTNLITTLQDEAGNWHKDLVDIHDLATRFYTTLFTSQARGNLTFSGQLLSNQLAVEA 214
            QRG++N I  +  E   W  D+ DI  +   ++  LFT+          + +++++   +
Sbjct: 649  QRGRSNRICGILGEDNRWRSDVTDIGCVFVSYFRNLFTAGGGSMDETIFEAVTSRVDATS 708

Query: 213  LERMEAIFTNEEVKKCLFSMNGSKAPRPDRMLARFFQHYWATVGDTLCNMVLNFLNNDIF 34
             + ++ ++  EE++  L  MN SK+P  D M ARFFQ +W  +G+ + ++ L FLN D  
Sbjct: 709  KKSLDQVYRREEIELALKDMNPSKSPGSDGMPARFFQKFWNIIGNDVVDVCLRFLNGDGS 768

Query: 33   LKKFNFTLI 7
            +  FN +LI
Sbjct: 769  IADFNHSLI 777



 Score = 48.5 bits (114), Expect(3) = 5e-50
 Identities = 25/77 (32%), Positives = 43/77 (55%)
 Frame = -3

Query: 635 LLKWKRDKLGHVQKSL*EKQEALDRLQQGAITISSKGRATVLAREIDKLREVDDVYWGQR 456
           L +W ++  G V+K +   +E LD LQ+   T +   +   +   +D + E +++ W QR
Sbjct: 568 LKRWNQETFGSVKKKVASLREELDVLQRQPPTSNIICKRNEVECLLDGVLEREELLWKQR 627

Query: 455 SRVMWRVKGNKNTSFFH 405
           +RV W   G++NT FFH
Sbjct: 628 ARVSWFKCGDRNTQFFH 644


>ref|XP_002450843.1| hypothetical protein SORBIDRAFT_05g019526 [Sorghum bicolor]
            gi|241936686|gb|EES09831.1| hypothetical protein
            SORBIDRAFT_05g019526 [Sorghum bicolor]
          Length = 1209

 Score =  126 bits (317), Expect(3) = 3e-43
 Identities = 67/187 (35%), Positives = 105/187 (56%)
 Frame = -2

Query: 1314 GRK*GFALLWPRDVQVEIKSFSTRHIEAYIRDASSIPWRFVGFYDHHETSKRRHSWNLMR 1135
            GR  G  + W   + V++  +S  HI+  I + S+ PWR    Y   +  +R  +W++++
Sbjct: 327  GRSGGLGIFWNNKISVQLLPYSKYHIDVIISEGSADPWRLTCVYGEAQIVERYKTWDMLK 386

Query: 1134 LINGLSTLPTIFMGDFNEVLLSSEHVSQRRHRSNWQMEHFLEVVNDCGIFDIEYEGFQFT 955
             I   S+LP + +GDFNEVL  SEH+   + RS  Q+  F E+V+ CG+ D+ YEG  +T
Sbjct: 387  SIKPNSSLPWVCIGDFNEVLHRSEHLGV-QERSYAQIAGFREMVDVCGLCDLGYEGRSWT 445

Query: 954  WCNNFVSPNSTRARLDMGLANQSWKDSFPEARLTHLSTNNSDHFPILLEVESRVQNGARQ 775
            +       +  R RLD  LA   W   FP A++ H++   SDH PI+L+ E+  Q   RQ
Sbjct: 446  YEKKVTGGSFCRVRLDRALATPEWSARFPLAKVRHITAAASDHGPIVLQWEA-AQGRQRQ 504

Query: 774  KPRFRFE 754
            + +FR+E
Sbjct: 505  RRQFRYE 511



 Score = 53.9 bits (128), Expect(3) = 3e-43
 Identities = 32/104 (30%), Positives = 56/104 (53%)
 Frame = -2

Query: 429 KQKHFLFPCISAQRGKTNLITTLQDEAGNWHKDLVDIHDLATRFYTTLFTSQARGNLTFS 250
           K  HF F   +++R K N+I  L+   G   +D  ++  +AT FY  L+T++   N+   
Sbjct: 621 KNTHF-FHLRASRRRKRNMIVKLKTANGQVTEDRKEMGQMATSFYKLLYTAEGTENMEAV 679

Query: 249 GQLLSNQLAVEALERMEAIFTNEEVKKCLFSMNGSKAPRPDRML 118
            + +  ++  E  +++ A F+  E+K+ LF M  +KAP PD  L
Sbjct: 680 LETVPAKVTTEMNDKLIAPFSELEIKEALFQMFPTKAPGPDGRL 723



 Score = 45.1 bits (105), Expect(3) = 3e-43
 Identities = 26/111 (23%), Positives = 44/111 (39%)
 Frame = -3

Query: 737 YEDRKDAIQSAWDKVRVLDPRRYLMDGIHYSRLELLKWKRDKLGHVQKSL*EKQEALDRL 558
           +ED  + I   W +         L   +     +L  W+    G V + L   +  L+ +
Sbjct: 517 HEDFANVISQTWQRGTKATTAHELQSKLRSVSCKLNHWEVRTFGQVSRELKGLRRELEMM 576

Query: 557 QQGAITISSKGRATVLAREIDKLREVDDVYWGQRSRVMWRVKGNKNTSFFH 405
           Q              +   I +L   +++ W QR+R+ W   G+KNT FFH
Sbjct: 577 QADVNRQGPSHVELKIKERIMELNHREELMWKQRARIQWLSAGDKNTHFFH 627


>gb|ABA96650.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1100

 Score =  122 bits (305), Expect(3) = 3e-43
 Identities = 61/174 (35%), Positives = 98/174 (56%), Gaps = 1/174 (0%)
 Frame = -2

Query: 1326 VDARGRK*GFALLWPRDVQVEIKSFSTRHIEAYIR-DASSIPWRFVGFYDHHETSKRRHS 1150
            VD  G   G AL W     +++ S++ RHI+  ++ D S++ WR    Y   +  +R + 
Sbjct: 170  VDGVGSGGGLALFWDESFHLDLLSYTNRHIDVLVKEDRSAMQWRCTFVYGEPKAHERHNM 229

Query: 1149 WNLMRLINGLSTLPTIFMGDFNEVLLSSEHVSQRRHRSNWQMEHFLEVVNDCGIFDIEYE 970
            W L+R I   ST P   MGDFNE +   EH S+ + +   QM  F E+++ C +FD+ + 
Sbjct: 230  WTLLRRIKPNSTAPWCLMGDFNEAMWQFEHFSEHKRKEK-QMLDFREILSHCDVFDLGFI 288

Query: 969  GFQFTWCNNFVSPNSTRARLDMGLANQSWKDSFPEARLTHLSTNNSDHFPILLE 808
            G  +T+ N      + R RLD  +A+QSW   +P+A++ HL ++ SDH PIL++
Sbjct: 289  GTPWTYDNKRKGGYNVRVRLDRAVASQSWSVLYPQAQVRHLVSSRSDHCPILVQ 342



 Score = 56.2 bits (134), Expect(3) = 3e-43
 Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 4/135 (2%)
 Frame = -2

Query: 399 SAQRGKTNLITTLQDEAGNWHKDLVDIHDLATRFYTTLFTSQARGNLTFSGQLLSNQLAV 220
           +A R + N I+ L    G+W     ++  +AT F+  L+T         + Q L + + +
Sbjct: 476 AAWRHRKNKISKLFLPDGSWTDQRKEMETMATNFFKDLYTKDP----LVTPQPLLDLIML 531

Query: 219 EALERMEA----IFTNEEVKKCLFSMNGSKAPRPDRMLARFFQHYWATVGDTLCNMVLNF 52
           +  E+M       F+++E+   LF +   KAP PD   ARFFQ  W  + + +C  V  F
Sbjct: 532 KVTEQMNEDLCKAFSDKEISDALFQIGPIKAPGPDGFPARFFQRNWEVLKNDVCKAVKLF 591

Query: 51  LNNDIFLKKFNFTLI 7
            +  +  +  N T I
Sbjct: 592 FDQKVMPEGVNTTAI 606



 Score = 47.4 bits (111), Expect(3) = 3e-43
 Identities = 28/108 (25%), Positives = 53/108 (49%)
 Frame = -3

Query: 734 EDRKDAIQSAWDKVRVLDPRRYLMDGIHYSRLELLKWKRDKLGHVQKSL*EKQEALDRLQ 555
           E   + I++AW++         +   +      L  W R+K G V K L   ++ ++ LQ
Sbjct: 366 ESLSEEIRTAWEQHHAATDLGSVSSKLKLVMGALQHWSREKFGSVNKELGALRKKMEELQ 425

Query: 554 QGAITISSKGRATVLAREIDKLREVDDVYWGQRSRVMWRVKGNKNTSF 411
            G      +   +  +R ++++   +++ W QRSRV W  +G++NTSF
Sbjct: 426 LGGRHTHDQEYQSC-SRRMEEILYREEMMWLQRSRVAWLREGDRNTSF 472


>gb|AAX95129.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|62733115|gb|AAX95232.1|
            retrotransposon protein, putative, unclassified [Oryza
            sativa Japonica Group]
          Length = 1324

 Score =  121 bits (304), Expect(3) = 1e-41
 Identities = 67/222 (30%), Positives = 114/222 (51%), Gaps = 3/222 (1%)
 Frame = -2

Query: 1404 FLIETKLRGIE*DTIKRKIKSPNALIVDARGRK*GFALLWPRDVQVEIKSFSTRHIEAYI 1225
            FL  TK+   +    + K+  PN ++ D +G+  G A+ W +++ + +++ S   ++  +
Sbjct: 480  FLSNTKMDTNKLQCFRWKLGMPNLVVKDCQGKSGGLAVFWKKEINLRLRTVSRLFMDVDV 539

Query: 1224 RDASSIPWRFVGFYDHHETSKRRHSWNLMRLINGLSTLPTIFMGDFNEVLLSSEHVSQRR 1045
             +     WRF G Y    + K+  +W  +R +N       + +GDFNEVL S E   +R 
Sbjct: 540  MEDDGFWWRFTGVYGEPRSDKKDLTWKALRTLNATKGELWLCVGDFNEVLFSWE--KERG 597

Query: 1044 H-RSNWQMEHFLEVVNDCGIFDIEYEGFQFTWCNNF-VSPNSTRARLDMGLANQSWKDSF 871
            H ++   M+ F + ++ C + ++ + G  FTW NN+ V     R RLD  +A+  W   F
Sbjct: 598  HAKAQSCMDRFRQTLDCCSLSNLGFTGDPFTWRNNWCVRDGYIRERLDRAVADSDWCCRF 657

Query: 870  PEARLTHLSTNNSDHFPILLEVESRV-QNGARQKPRFRFEGG 748
            P  R+      +SDH P+++   + V  NG R KP FRFE G
Sbjct: 658  PSFRVRKGDPRHSDHHPVIVTTSNEVIWNGGRSKPGFRFEAG 699



 Score = 67.4 bits (163), Expect(3) = 1e-41
 Identities = 35/104 (33%), Positives = 59/104 (56%)
 Frame = -3

Query: 716  IQSAWDKVRVLDPRRYLMDGIHYSRLELLKWKRDKLGHVQKSL*EKQEALDRLQQGAITI 537
            +++AW K+ V      +MD I      L  W ++ LG ++K + + ++AL+  ++  I+ 
Sbjct: 710  VENAW-KLSVGPRGGKVMDAIREVAANLWDWSKNFLGDLEKRIKKAKQALEAHRRSPISS 768

Query: 536  SSKGRATVLAREIDKLREVDDVYWGQRSRVMWRVKGNKNTSFFH 405
            S+  R  VL   +DKL E  ++YW QR+   W  KG++NT FFH
Sbjct: 769  STASREAVLKYRLDKLEEQRELYWRQRANQHWLEKGDRNTKFFH 812



 Score = 31.2 bits (69), Expect(3) = 1e-41
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -3

Query: 1499 MNILSWNCWGLGHPRAIRSLAGLVTKKKPNL 1407
            M I++WNC GLG+   +R L  L  +  P++
Sbjct: 448  MKIIAWNCRGLGNGPTVRGLLNLQKEDDPDI 478