BLASTX nr result

ID: Lithospermum22_contig00009693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00009693
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514032.1| conserved hypothetical protein [Ricinus comm...    61   1e-07
ref|XP_002302340.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
emb|CAN70092.1| hypothetical protein VITISV_030028 [Vitis vinifera]    59   3e-07
ref|XP_004154854.1| PREDICTED: AP-4 complex subunit mu-1-like [C...    56   3e-06
ref|XP_004147850.1| PREDICTED: LOW QUALITY PROTEIN: AP-4 complex...    56   3e-06

>ref|XP_002514032.1| conserved hypothetical protein [Ricinus communis]
           gi|223547118|gb|EEF48615.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 63

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/33 (78%), Positives = 31/33 (93%)
 Frame = -3

Query: 99  SDRGDISKGSAEIFFRKVKFLKEDGEEEAPPIF 1
           +DRG++ KGSAEIFFRKVKF KEDG+EEAPP+F
Sbjct: 2   ADRGEVPKGSAEIFFRKVKFWKEDGQEEAPPVF 34


>ref|XP_002302340.1| predicted protein [Populus trichocarpa] gi|222844066|gb|EEE81613.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/46 (65%), Positives = 34/46 (73%), Gaps = 7/46 (15%)
 Frame = -3

Query: 117 FQLRQQSD-------RGDISKGSAEIFFRKVKFLKEDGEEEAPPIF 1
           F L Q+ D       RG++ KGSAEIFFRKVKF KEDGEEEAPP+F
Sbjct: 6   FVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEEEAPPVF 51


>emb|CAN70092.1| hypothetical protein VITISV_030028 [Vitis vinifera]
          Length = 619

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/33 (78%), Positives = 30/33 (90%)
 Frame = -3

Query: 99  SDRGDISKGSAEIFFRKVKFLKEDGEEEAPPIF 1
           SDRG++ KGSAEIFFRKVKF KEDGE +APP+F
Sbjct: 203 SDRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVF 235


>ref|XP_004154854.1| PREDICTED: AP-4 complex subunit mu-1-like [Cucumis sativus]
          Length = 451

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 7/46 (15%)
 Frame = -3

Query: 117 FQLRQQSD-------RGDISKGSAEIFFRKVKFLKEDGEEEAPPIF 1
           F L Q+ D       RG++ KGSAEIFFRKVKF KEDGE +APP+F
Sbjct: 6   FVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVF 51


>ref|XP_004147850.1| PREDICTED: LOW QUALITY PROTEIN: AP-4 complex subunit mu-1-like
           [Cucumis sativus]
          Length = 451

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 7/46 (15%)
 Frame = -3

Query: 117 FQLRQQSD-------RGDISKGSAEIFFRKVKFLKEDGEEEAPPIF 1
           F L Q+ D       RG++ KGSAEIFFRKVKF KEDGE +APP+F
Sbjct: 6   FVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVF 51


Top