BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00009647
         (1528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509740.1| cleavage and polyadenylation specificity fac...   382   e-103
ref|XP_004147971.1| PREDICTED: E3 ubiquitin-protein ligase At1g1...   369   2e-99
ref|XP_003517458.1| PREDICTED: E3 ubiquitin-protein ligase At1g1...   364   3e-98
ref|XP_003631422.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   363   5e-98
ref|XP_003631423.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   359   1e-96

>ref|XP_002509740.1| cleavage and polyadenylation specificity factor, putative [Ricinus
            communis] gi|223549639|gb|EEF51127.1| cleavage and
            polyadenylation specificity factor, putative [Ricinus
            communis]
          Length = 383

 Score =  382 bits (982), Expect = e-103
 Identities = 186/339 (54%), Positives = 225/339 (66%), Gaps = 1/339 (0%)
 Frame = +1

Query: 295  QAARFLRQASGHGSMREPSVLVRETAAQHLEERQNDWAYSKPVVVIDVVWNIGFVLVGIF 474
            +AARFLR+AS    MREPS+LVRETAA+ LEERQ+DWAYSKPVV++D++WN  FV V I 
Sbjct: 45   EAARFLRRASSRRMMREPSMLVRETAAEQLEERQSDWAYSKPVVILDILWNFAFVAVAIG 104

Query: 475  LGVLSLDERPDVPLRLWIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 654
            + ++S  E P +PLRLWI GY                                       
Sbjct: 105  VLIMSRKEDPSMPLRLWIVGYGLQCVLHMVCVCVEYRRRRRRRRRVGFGIGSDGNLSSGS 164

Query: 655  XXXXXXYVSLSQFTEEGTSSDTAKQLGSVNTMFSFIWWLLGFYWVSDAGPHLIEQAPLLY 834
                  YV+L+Q  +   +S  AK L S NTMFSFIWW++GFYWVS  G  L   +P LY
Sbjct: 165  RGDSGEYVTLAQLEDHDGTSSVAKHLESANTMFSFIWWIIGFYWVSAGGQALSHNSPQLY 224

Query: 835  WLCXXXXXXXXXXXXXXIALACVIGIAVCCCLPCIIAILYAVAEQEGASKEEVERLAKYT 1014
            WLC              +ALAC+IGIAVCCCLPCIIAILYAVA+QEGASKE++E+L+K+ 
Sbjct: 225  WLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVADQEGASKEDIEQLSKFK 284

Query: 1015 FRRVDNTEQKYSDGETKGP-GGLMTECETETPNEHYLALEDAECCICLSAYDDGAELREL 1191
            FRRVDN E+   +G+ +GP GG+MTEC T++P EH L+ EDAECCICLSAYDDG ELREL
Sbjct: 285  FRRVDNDEKLTGNGDEQGPLGGVMTECGTDSPVEHILSEEDAECCICLSAYDDGVELREL 344

Query: 1192 PCGHHFHSTCVDKWLFINATCPLCKYNITQXXXXXXQEV 1308
            PCGHHFH  CVDKWL+INATCPLCKYNI +      +EV
Sbjct: 345  PCGHHFHCACVDKWLYINATCPLCKYNILKSSSRDREEV 383


>ref|XP_004147971.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Cucumis
            sativus]
          Length = 383

 Score =  369 bits (946), Expect = 2e-99
 Identities = 187/342 (54%), Positives = 225/342 (65%), Gaps = 4/342 (1%)
 Frame = +1

Query: 295  QAARFLRQASGHGSMREPSVLVRETAAQHLEERQNDWAYSKPVVVIDVVWNIGFVLVGIF 474
            QAARFLRQAS   +MREPS+LVRETAA+ LEERQ+DWAYSKPVV++D+VWN  FV+V   
Sbjct: 45   QAARFLRQASNRRTMREPSMLVRETAAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAAT 104

Query: 475  LGVLSLDERPDVPLRLWIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 654
            + VLS +E P +PLRLWI GY                                       
Sbjct: 105  ILVLSRNESPSMPLRLWIVGYAFQCILHMVCVCVEYRRRRQLRYSAFSSMEEGNSARSIS 164

Query: 655  XXXXXX----YVSLSQFTEEGTSSDTAKQLGSVNTMFSFIWWLLGFYWVSDAGPHLIEQA 822
                      YVSL+Q  E  +S   AK L S NTMFSFIWW++GFYWVS  G  L + +
Sbjct: 165  GLGSRANSSHYVSLAQLDENDSS--VAKHLESANTMFSFIWWIIGFYWVSAGGQSLAQAS 222

Query: 823  PLLYWLCXXXXXXXXXXXXXXIALACVIGIAVCCCLPCIIAILYAVAEQEGASKEEVERL 1002
            PLLYWLC              +ALAC+IGIAVCCCLPCIIA+LYAVA+QEGA+KE+VE+L
Sbjct: 223  PLLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGATKEDVEQL 282

Query: 1003 AKYTFRRVDNTEQKYSDGETKGPGGLMTECETETPNEHYLALEDAECCICLSAYDDGAEL 1182
            +K+ FR+V+NTE K+S    +  GG+M+EC T++P E  L  EDAECCICLSAY+DG EL
Sbjct: 283  SKFKFRKVENTE-KFSTDVQEPLGGVMSECCTDSPIERPLLQEDAECCICLSAYEDGVEL 341

Query: 1183 RELPCGHHFHSTCVDKWLFINATCPLCKYNITQXXXXXXQEV 1308
            RELPCGHHFH  CVDKWL+INATCPLCKYNI +      +EV
Sbjct: 342  RELPCGHHFHCACVDKWLYINATCPLCKYNILKNSNLAQEEV 383


>ref|XP_003517458.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Glycine max]
          Length = 385

 Score =  364 bits (935), Expect = 3e-98
 Identities = 186/348 (53%), Positives = 223/348 (64%), Gaps = 10/348 (2%)
 Frame = +1

Query: 295  QAARFLRQASGHGSMREPSVLVRETAAQHLEERQNDWAYSKPVVVIDVVWNIGFVLVGIF 474
            QAARFLR+ASG   MREPS+LVRE AA+ LEERQ+DWAYSKPVVV+D+VWN  FV+V   
Sbjct: 42   QAARFLRRASGRRMMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNFAFVVVAGA 101

Query: 475  LGVLSLDERPDVPLRLWIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 654
            + VLS  E P +PLRLWI GY                                       
Sbjct: 102  VLVLSASEAPGMPLRLWIVGYAMQCVLHMVCVCVEYRRRRRQQRAAASSVQDRVGSSSGN 161

Query: 655  XXXXXXYVSLS---------QFTEEGTSSDTAKQLGSVNTMFSFIWWLLGFYWVSDAGPH 807
                    S S         Q  +EGTS   AK L S NTMFSF+WW++GFYWVS  G  
Sbjct: 162  LSVSSREGSASGSAQYVSLGQLDDEGTS--VAKHLESANTMFSFVWWIIGFYWVSAGGQA 219

Query: 808  LIEQAPLLYWLCXXXXXXXXXXXXXXIALACVIGIAVCCCLPCIIAILYAVAEQEGASKE 987
            L + +P LYWLC              +ALAC+IGIAVCCCLPCIIA+LYAVA+QEGASKE
Sbjct: 220  LAQDSPQLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGASKE 279

Query: 988  EVERLAKYTFRRVDNTEQKYSDGETKGP-GGLMTECETETPNEHYLALEDAECCICLSAY 1164
            ++E+L+K+ FRR+++ E+    G  +GP GG+MTEC+ ++P EH LA EDAECCICLS+Y
Sbjct: 280  DIEQLSKFKFRRIESNEK--LTGTIQGPVGGIMTECQADSPIEHVLAEEDAECCICLSSY 337

Query: 1165 DDGAELRELPCGHHFHSTCVDKWLFINATCPLCKYNITQXXXXXXQEV 1308
            DDG ELRELPCGHHFH  CVDKWL+INATCPLCKYNI +      +EV
Sbjct: 338  DDGVELRELPCGHHFHCVCVDKWLYINATCPLCKYNILKSNTLSQEEV 385


>ref|XP_003631422.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
            [Vitis vinifera]
          Length = 383

 Score =  363 bits (933), Expect = 5e-98
 Identities = 184/342 (53%), Positives = 223/342 (65%), Gaps = 4/342 (1%)
 Frame = +1

Query: 295  QAARFLRQASGHGSMREPSVLVRETAAQHLEERQNDWAYSKPVVVIDVVWNIGFVLVGIF 474
            +AARFLR+AS    MREPS+LVRETAA+ LEERQ+DWAYSKPVVV+D++WN  FV+V   
Sbjct: 45   EAARFLRRASSRRMMREPSMLVRETAAEQLEERQSDWAYSKPVVVLDMIWNFAFVVVAAA 104

Query: 475  LGVLSLDERPDVPLRLWIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 654
            + VLS  E P +PLR WI GY                                       
Sbjct: 105  VLVLSRRESPSMPLRFWIVGYALQCILHIVCVSVEYRRRRRRAGVFGSEDDGIGSGGSYS 164

Query: 655  XXXXXX---YVSLSQFTEEGTSSDTAKQLGSVNTMFSFIWWLLGFYWVSDAGPHLIEQAP 825
                     YV+L+   +E ++S  AK L S NTMFSFIWW++GFYWVS  G  L   +P
Sbjct: 165  SSPQGDSSQYVTLASLGDESSTS-VAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSP 223

Query: 826  LLYWLCXXXXXXXXXXXXXXIALACVIGIAVCCCLPCIIAILYAVAEQEGASKEEVERLA 1005
             LYWLC              +ALACVIGIAVCCCLPCIIAILYAVA+QEGASKE++++L+
Sbjct: 224  QLYWLCIIFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVADQEGASKEDIDQLS 283

Query: 1006 KYTFRRVDNTEQKYSDGETKGP-GGLMTECETETPNEHYLALEDAECCICLSAYDDGAEL 1182
            ++ FR+V + E+   DG+ +G  GG+MTEC T+ P EH L+ EDAECCICLSAYDDG EL
Sbjct: 284  RFKFRKVGDIEK--IDGDIQGACGGIMTECGTDAPTEHVLSQEDAECCICLSAYDDGVEL 341

Query: 1183 RELPCGHHFHSTCVDKWLFINATCPLCKYNITQXXXXXXQEV 1308
            RELPCGHHFH TCVDKWL+INATCPLCKYNI +      +EV
Sbjct: 342  RELPCGHHFHCTCVDKWLYINATCPLCKYNILKSSSNGREEV 383


>ref|XP_003631423.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
            [Vitis vinifera]
          Length = 392

 Score =  359 bits (921), Expect = 1e-96
 Identities = 184/350 (52%), Positives = 221/350 (63%), Gaps = 12/350 (3%)
 Frame = +1

Query: 295  QAARFLRQASGHGSMREPSVLVRETAAQHLEERQNDWAYSKPVVVIDVVWNIGFVLVGIF 474
            +AARFLR+AS    MREPS+LVRETAA+ LEERQ+DWAYSKPVVV+D++WN  FV+V   
Sbjct: 45   EAARFLRRASSRRMMREPSMLVRETAAEQLEERQSDWAYSKPVVVLDMIWNFAFVVVAAA 104

Query: 475  LGVLSLDERPDVPLRLWIFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 654
            + VLS  E P +PLR WI GY                                       
Sbjct: 105  VLVLSRRESPSMPLRFWIVGYALQCILHIVCVSVEYRRRRRRAGVFGSEDDGIGSGGSYS 164

Query: 655  XXXXXX---YVSLSQFTEEGTS--------SDTAKQLGSVNTMFSFIWWLLGFYWVSDAG 801
                     YV+L+   E  +         S  AK L S NTMFSFIWW++GFYWVS  G
Sbjct: 165  SSPQGDSSQYVTLANVDEHHSQTCQFLSLLSSVAKHLESANTMFSFIWWIIGFYWVSAGG 224

Query: 802  PHLIEQAPLLYWLCXXXXXXXXXXXXXXIALACVIGIAVCCCLPCIIAILYAVAEQEGAS 981
              L   +P LYWLC              +ALACVIGIAVCCCLPCIIAILYAVA+QEGAS
Sbjct: 225  QALARDSPQLYWLCIIFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVADQEGAS 284

Query: 982  KEEVERLAKYTFRRVDNTEQKYSDGETKGP-GGLMTECETETPNEHYLALEDAECCICLS 1158
            KE++++L+++ FR+V + E+   DG+ +G  GG+MTEC T+ P EH L+ EDAECCICLS
Sbjct: 285  KEDIDQLSRFKFRKVGDIEK--IDGDIQGACGGIMTECGTDAPTEHVLSQEDAECCICLS 342

Query: 1159 AYDDGAELRELPCGHHFHSTCVDKWLFINATCPLCKYNITQXXXXXXQEV 1308
            AYDDG ELRELPCGHHFH TCVDKWL+INATCPLCKYNI +      +EV
Sbjct: 343  AYDDGVELRELPCGHHFHCTCVDKWLYINATCPLCKYNILKSSSNGREEV 392