BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00009573
         (989 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi...    77   4e-15
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]    73   4e-13
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab...    71   1e-12
emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera]    71   1e-12
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]    71   1e-12

>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1156

 Score = 77.4 bits (189), Expect(2) = 4e-15
 Identities = 44/97 (45%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
 Frame = -1

Query: 296 HSVTVDSAD-LWHRRLGHPFQKIISSLRVTLNXXXXXXXXXXXXXXSVCFKAKQPRTSFP 120
           H+  V S   LWH+RLGHP   ++SSL V  +               VCF+AKQ R  FP
Sbjct: 80  HTAKVSSDQALWHQRLGHPSFSVLSSLPVLTSSSLSVGSRSCD----VCFRAKQTREVFP 135

Query: 119 LI*IKLLVYLNLIHCDIWGPVSVSSSNGTRYFLTIVD 9
           +   K +   +LIHCD+WGP  V SS G  YFLTIVD
Sbjct: 136 VSTNKSIECFSLIHCDVWGPYRVPSSCGAVYFLTIVD 172



 Score = 30.8 bits (68), Expect(2) = 4e-15
 Identities = 19/56 (33%), Positives = 29/56 (51%)
 Frame = -2

Query: 487 FIVLRSMKQEQIGVMMKILTPRNFFLSLKQREEDHTLRNLIGAGVQSNGVYWFRHV 320
           F  L S K+E I    +++T      +LK  + D   R LIG+G + +GVY+   V
Sbjct: 19  FSSLNSNKEESISSEHRLVTLTLTHENLKACKLDRFSRTLIGSGEERDGVYYLTDV 74


>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
          Length = 1099

 Score = 73.2 bits (178), Expect(2) = 4e-13
 Identities = 37/88 (42%), Positives = 46/88 (52%)
 Frame = -1

Query: 272 DLWHRRLGHPFQKIISSLRVTLNXXXXXXXXXXXXXXSVCFKAKQPRTSFPLI*IKLLVY 93
           +LWH+R+GHP +K++  L    N               +CF+AK PR  FPL   K    
Sbjct: 181 ELWHKRMGHPSEKVVKLLPPVSNLKGSLNKACE-----ICFRAKHPRDKFPLSDNKATRI 235

Query: 92  LNLIHCDIWGPVSVSSSNGTRYFLTIVD 9
              IHCD+WG     SS G RYFLTIVD
Sbjct: 236 FEKIHCDLWGSYKHVSSCGARYFLTIVD 263



 Score = 28.1 bits (61), Expect(2) = 4e-13
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = -2

Query: 391 EDHTLRNLIGAGVQSNGVYWF 329
           +DHT R LIG GV+ +G+Y+F
Sbjct: 141 QDHT-RELIGTGVRRDGLYYF 160


>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1486

 Score = 70.9 bits (172), Expect(2) = 1e-12
 Identities = 37/95 (38%), Positives = 49/95 (51%)
 Frame = -1

Query: 293 SVTVDSADLWHRRLGHPFQKIISSLRVTLNXXXXXXXXXXXXXXSVCFKAKQPRTSFPLI 114
           S  + S+ LWH+RLGHP  K +  L  +                 +C +AKQ R  FPL 
Sbjct: 498 SKALPSSQLWHQRLGHPSSKALHLLPFS----DVTSSTFDSKTCEICIQAKQTRDPFPLS 553

Query: 113 *IKLLVYLNLIHCDIWGPVSVSSSNGTRYFLTIVD 9
             K      L+HCD+WGP   +S  G+RYFLT+VD
Sbjct: 554 SNKTSFAFELVHCDLWGPYRTTSICGSRYFLTLVD 588



 Score = 28.9 bits (63), Expect(2) = 1e-12
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = -2

Query: 391 EDHTLRNLIGAGVQSNGVYWFRHV 320
           +D T   LIGAG + NG+Y+FR V
Sbjct: 467 QDRTTLMLIGAGRELNGLYFFRGV 490


>emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera]
          Length = 1262

 Score = 71.2 bits (173), Expect(2) = 1e-12
 Identities = 42/102 (41%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
 Frame = -1

Query: 302 VEHSVTVDSA----DLWHRRLGHPFQKIISSLRVTLNXXXXXXXXXXXXXXSVCFKAKQP 135
           VEH V+V +A    +LWH+R+GHP +K++  L    N               +CF+AK P
Sbjct: 500 VEH-VSVHNAASTLELWHKRMGHPSEKVVKLLPPVSNLKGSLNKACE-----ICFRAKHP 553

Query: 134 RTSFPLI*IKLLVYLNLIHCDIWGPVSVSSSNGTRYFLTIVD 9
           R  F L   K       IHCD+WG     SS G RYFLTIVD
Sbjct: 554 RDKFSLSDNKATRIFEKIHCDLWGSYKHVSSCGARYFLTIVD 595



 Score = 28.1 bits (61), Expect(2) = 1e-12
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = -2

Query: 391 EDHTLRNLIGAGVQSNGVYWF 329
           +DHT R LIG GV+ +G+Y+F
Sbjct: 473 QDHT-RELIGTGVRRDGLYYF 492


>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
          Length = 1129

 Score = 71.2 bits (173), Expect(2) = 1e-12
 Identities = 36/88 (40%), Positives = 45/88 (51%)
 Frame = -1

Query: 272 DLWHRRLGHPFQKIISSLRVTLNXXXXXXXXXXXXXXSVCFKAKQPRTSFPLI*IKLLVY 93
           +LWH R+GHP +K++  L +  N               +CF+AK PR  FPL   K    
Sbjct: 262 ELWHNRMGHPSEKVVKLLPLVSNIKGSLNKACE-----ICFRAKHPRDKFPLSDNKATRI 316

Query: 92  LNLIHCDIWGPVSVSSSNGTRYFLTIVD 9
              IHCD+W      SS G RYFLTIVD
Sbjct: 317 FEKIHCDLWASYKHVSSCGARYFLTIVD 344



 Score = 28.1 bits (61), Expect(2) = 1e-12
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = -2

Query: 391 EDHTLRNLIGAGVQSNGVYWF 329
           +DHT R LIG GV+ +G+Y+F
Sbjct: 222 QDHT-RELIGTGVRRDGLYYF 241