BLASTX nr result

ID: Lithospermum22_contig00009568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00009568
         (922 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309412.1| predicted protein [Populus trichocarpa] gi|2...    65   3e-08
ref|XP_002530529.1| RNA binding protein, putative [Ricinus commu...    64   5e-08
ref|XP_004149190.1| PREDICTED: glycine-rich RNA-binding protein ...    59   2e-06
ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycin...    58   3e-06
ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein ...    58   4e-06

>ref|XP_002309412.1| predicted protein [Populus trichocarpa] gi|222855388|gb|EEE92935.1|
           predicted protein [Populus trichocarpa]
          Length = 139

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 31/39 (79%), Positives = 35/39 (89%)
 Frame = +3

Query: 48  ALFISRRGIVTKLFVGGLSFYTTENGLLEAFSKHGQVIE 164
           ALFI +RGI TKLFVGGLS YTTENGL EAFS++GQV+E
Sbjct: 29  ALFIWQRGITTKLFVGGLSIYTTENGLSEAFSQYGQVVE 67


>ref|XP_002530529.1| RNA binding protein, putative [Ricinus communis]
           gi|223529933|gb|EEF31861.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 127

 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 29/39 (74%), Positives = 35/39 (89%)
 Frame = +3

Query: 48  ALFISRRGIVTKLFVGGLSFYTTENGLLEAFSKHGQVIE 164
           +LF+S RGI TKLFVGGLSFYTT+ GL EAFS++GQV+E
Sbjct: 21  SLFVSYRGIATKLFVGGLSFYTTDKGLTEAFSQYGQVVE 59


>ref|XP_004149190.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Cucumis sativus]
          Length = 134

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 27/36 (75%), Positives = 32/36 (88%)
 Frame = +3

Query: 57  ISRRGIVTKLFVGGLSFYTTENGLLEAFSKHGQVIE 164
           +S RGI TKLFVGGLS+YTT+ GL EAFS++GQVIE
Sbjct: 28  VSYRGIATKLFVGGLSYYTTDKGLSEAFSQYGQVIE 63


>ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycine max]
           gi|255631508|gb|ACU16121.1| unknown [Glycine max]
          Length = 130

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 29/39 (74%), Positives = 31/39 (79%)
 Frame = +3

Query: 48  ALFISRRGIVTKLFVGGLSFYTTENGLLEAFSKHGQVIE 164
           +L   RRGI  KLFVGGLSFYTTEN L EAFS +GQVIE
Sbjct: 19  SLLSFRRGIAYKLFVGGLSFYTTENALSEAFSNYGQVIE 57


>ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Vitis vinifera] gi|297740158|emb|CBI30340.3| unnamed
           protein product [Vitis vinifera]
          Length = 133

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 28/39 (71%), Positives = 32/39 (82%)
 Frame = +3

Query: 48  ALFISRRGIVTKLFVGGLSFYTTENGLLEAFSKHGQVIE 164
           AL I  RGI +KLFVGGLSFYTTE GL E FS++GQV+E
Sbjct: 24  ALLICCRGIASKLFVGGLSFYTTEKGLSEHFSQYGQVVE 62


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