BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00009566
         (1379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum l...   366   9e-99
ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, puta...   365   1e-98
ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...   363   7e-98
ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|2...   363   7e-98
emb|CBI21412.3| unnamed protein product [Vitis vinifera]              361   3e-97

>gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum lycopersicum]
          Length = 1561

 Score =  366 bits (939), Expect = 9e-99
 Identities = 192/245 (78%), Positives = 207/245 (84%), Gaps = 2/245 (0%)
 Frame = +3

Query: 24   ELLKRLVKKREDVKRKLKEAKGLKIQQFDITQQALKLTANSIYGCLGSSNSRFYAKPLAE 203
            ELLK LV++R  VK  LK A GLK QQFDI QQALKLTANS+YGCLG SNSRFYAK LAE
Sbjct: 995  ELLKNLVERRRMVKSWLKTASGLKAQQFDIQQQALKLTANSMYGCLGFSNSRFYAKSLAE 1054

Query: 204  LITLQGREILQSTVDLVQNTLNLEVIYGDTDSIMIYSGSNDIGNAKAIATKVTQEVNKKY 383
            LIT QGREILQSTVDLVQN LNLEVIYGDTDSIMIYSG +DIG +KAIA KV QEVNKKY
Sbjct: 1055 LITSQGREILQSTVDLVQNLLNLEVIYGDTDSIMIYSGLDDIGKSKAIAAKVIQEVNKKY 1114

Query: 384  RCLKIHPDCFYKRMXXXXXXXYAAVKIQ--DGVPYEVIERKGLDMVRRDWSMLAKEVGDF 557
            RCL+I  D  YKRM       YAAVK+Q  DG PYEVIE+KGLDMVRRDWS+L+KE+GDF
Sbjct: 1115 RCLEIDLDGLYKRMLLLKKKKYAAVKVQFKDGKPYEVIEKKGLDMVRRDWSLLSKELGDF 1174

Query: 558  CLSQILSDSSREAVVESIHKSLMKVQEDMKNGQIELEKYIITKSLTKPPEAYPDAKSQPH 737
            CLSQILS  S E V+ESIH +LMKVQE M+ GQIELEKY+ITKSLTKPPEAYPDAKSQPH
Sbjct: 1175 CLSQILSGGSCEDVIESIHNALMKVQEQMRTGQIELEKYVITKSLTKPPEAYPDAKSQPH 1234

Query: 738  VEVAL 752
            VEVAL
Sbjct: 1235 VEVAL 1239



 Score =  199 bits (507), Expect = 1e-48
 Identities = 97/154 (62%), Positives = 115/154 (74%), Gaps = 5/154 (3%)
 Frame = +3

Query: 933  ARHPDELKRDNENWIIDINYYLAQQIHPVVSRLCASIEGTSPARLADCLGLDSSKFQSKS 1112
            ARHPDELKRDN NWI+DI+YYLAQQIHPV+SRLCASI+GTSPARLADCLGLDSSKFQ+KS
Sbjct: 1278 ARHPDELKRDNGNWIVDIDYYLAQQIHPVISRLCASIQGTSPARLADCLGLDSSKFQNKS 1337

Query: 1113 GEAIMHDPSTSLLYTTDDEERYRCCNPLVLSCPSCSAMLECPPIYPSVVQIL----ADTE 1280
             EA+  DPS +LL   DDEER+R C PL L+CPSCS   EC PI+ S+   +    AD +
Sbjct: 1338 SEAVNDDPSNALLCVADDEERFRGCEPLTLTCPSCSCSFECAPIFSSICSSIRQNPADLQ 1397

Query: 1281 -GRMARNIWLKLRCSRCPEEGDVGKFSTASIRNQ 1379
             G  A  +W +  C +CPEE + G  S+A I NQ
Sbjct: 1398 VGESASKVWERFSCPKCPEESE-GNISSALIANQ 1430


>ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis]
            gi|223537171|gb|EEF38804.1| DNA polymerase alpha
            catalytic subunit, putative [Ricinus communis]
          Length = 1526

 Score =  365 bits (937), Expect = 1e-98
 Identities = 191/245 (77%), Positives = 207/245 (84%), Gaps = 2/245 (0%)
 Frame = +3

Query: 24   ELLKRLVKKREDVKRKLKEAKGLKIQQFDITQQALKLTANSIYGCLGSSNSRFYAKPLAE 203
            ELLK LV++R  VK  +K A GLK+QQ DI QQALKLTANS+YGCLG SNSRFYAKPLAE
Sbjct: 959  ELLKNLVERRRMVKSWMKNASGLKVQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAE 1018

Query: 204  LITLQGREILQSTVDLVQNTLNLEVIYGDTDSIMIYSGSNDIGNAKAIATKVTQEVNKKY 383
            LITLQGREILQSTVDLVQN LNLEVIYGDTDSIMIYSG  DI  AKAIA KV QEVNKKY
Sbjct: 1019 LITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGLEDITKAKAIAGKVIQEVNKKY 1078

Query: 384  RCLKIHPDCFYKRMXXXXXXXYAAVKIQ--DGVPYEVIERKGLDMVRRDWSMLAKEVGDF 557
            RCL+I  D  YKRM       YAAVK+Q  DG PYEVIERKGLDMVRRDWS+L+KE+GDF
Sbjct: 1079 RCLEIDLDGLYKRMLLLKKKKYAAVKLQFKDGTPYEVIERKGLDMVRRDWSLLSKELGDF 1138

Query: 558  CLSQILSDSSREAVVESIHKSLMKVQEDMKNGQIELEKYIITKSLTKPPEAYPDAKSQPH 737
            CL+QILS  S E VVESIH SLMKVQE+M+NGQ+ LEKYIITK+LTKPPEAYPDAK+QPH
Sbjct: 1139 CLAQILSGGSCEDVVESIHNSLMKVQEEMRNGQVALEKYIITKTLTKPPEAYPDAKNQPH 1198

Query: 738  VEVAL 752
            V VAL
Sbjct: 1199 VMVAL 1203



 Score =  203 bits (517), Expect = 7e-50
 Identities = 93/154 (60%), Positives = 117/154 (75%), Gaps = 5/154 (3%)
 Frame = +3

Query: 933  ARHPDELKRDNENWIIDINYYLAQQIHPVVSRLCASIEGTSPARLADCLGLDSSKFQSKS 1112
            ARHPDELK+D+  W+IDI+YYL+QQIHPVVSRLCASI+GTSP RLADCLGLDSSKFQ KS
Sbjct: 1242 ARHPDELKKDDGKWMIDIDYYLSQQIHPVVSRLCASIQGTSPERLADCLGLDSSKFQIKS 1301

Query: 1113 GEAIMHDPSTSLLYTTDDEERYRCCNPLVLSCPSCSAMLECPPIYPSVVQILADTEGRM- 1289
             EAI +DP++SLL+  +DEERYR C PL+LSCPSCS   ECP ++ S+   ++    ++ 
Sbjct: 1302 SEAINNDPASSLLFAVNDEERYRSCEPLLLSCPSCSGTFECPAVFGSICTSISANPTKLQ 1361

Query: 1290 ----ARNIWLKLRCSRCPEEGDVGKFSTASIRNQ 1379
                  N W ++RC +CPEEGD G+ S A + NQ
Sbjct: 1362 VEESVSNFWCRMRCPKCPEEGDTGRISPAMLANQ 1395


>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
            vinifera]
          Length = 1522

 Score =  363 bits (931), Expect = 7e-98
 Identities = 191/245 (77%), Positives = 210/245 (85%), Gaps = 2/245 (0%)
 Frame = +3

Query: 24   ELLKRLVKKREDVKRKLKEAKGLKIQQFDITQQALKLTANSIYGCLGSSNSRFYAKPLAE 203
            ELLK+LV++R+ VK +LK A GLK+QQ DI QQALKLTANS+YGCLG SNSRFYAKPLAE
Sbjct: 959  ELLKKLVERRKTVKSRLKTASGLKVQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAE 1018

Query: 204  LITLQGREILQSTVDLVQNTLNLEVIYGDTDSIMIYSGSNDIGNAKAIATKVTQEVNKKY 383
            LITLQGREILQSTVDLVQN LNLEVIYGDTDSIMIY+G +DI  AKAIA KV QEVNKKY
Sbjct: 1019 LITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYTGLDDITKAKAIAGKVIQEVNKKY 1078

Query: 384  RCLKIHPDCFYKRMXXXXXXXYAAVKIQ--DGVPYEVIERKGLDMVRRDWSMLAKEVGDF 557
            RCL+I  D  YKRM       YAAVK+Q  DG PYEVIERKGLDMVRRDWS+L+KE+GDF
Sbjct: 1079 RCLEIDLDGLYKRMLLLKKKKYAAVKLQFKDGTPYEVIERKGLDMVRRDWSLLSKELGDF 1138

Query: 558  CLSQILSDSSREAVVESIHKSLMKVQEDMKNGQIELEKYIITKSLTKPPEAYPDAKSQPH 737
             LSQILS  S E VVESIH SLMKVQEDM+NG++ LEKYIITKSLTKPPEAYPD K+QPH
Sbjct: 1139 SLSQILSGGSCEDVVESIHNSLMKVQEDMRNGEVALEKYIITKSLTKPPEAYPD-KNQPH 1197

Query: 738  VEVAL 752
            V+VAL
Sbjct: 1198 VQVAL 1202



 Score =  194 bits (493), Expect = 5e-47
 Identities = 97/153 (63%), Positives = 115/153 (75%), Gaps = 4/153 (2%)
 Frame = +3

Query: 933  ARHPDELKRDNENWIIDINYYLAQQIHPVVSRLCASIEGTSPARLADCLGLDSSKFQSKS 1112
            ARHPDELKRDN  W+IDI+YYLAQQIHPVVSRLCASI+GTSPARLADCLGLDSSKFQS+ 
Sbjct: 1241 ARHPDELKRDNGKWMIDIDYYLAQQIHPVVSRLCASIQGTSPARLADCLGLDSSKFQSRR 1300

Query: 1113 GEAIMHDPSTSLLYTTDDEERYRCCNPLVLSCPSCSAMLECPPIYPSVVQILADTEGRM- 1289
             EAI +D S SLL  + DEERYR C  L+LSCPSC    +CP ++ SV   + +   ++ 
Sbjct: 1301 SEAINNDFSISLL--SADEERYRGCEHLILSCPSCFGTFDCPTLFNSVHTSITEKSTQVQ 1358

Query: 1290 ---ARNIWLKLRCSRCPEEGDVGKFSTASIRNQ 1379
               + N W +LRC +CPEEGDVG+ S A I NQ
Sbjct: 1359 VEESNNFWQRLRCPKCPEEGDVGRMSPALIANQ 1391


>ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|222853622|gb|EEE91169.1|
            predicted protein [Populus trichocarpa]
          Length = 1312

 Score =  363 bits (931), Expect = 7e-98
 Identities = 188/245 (76%), Positives = 207/245 (84%), Gaps = 2/245 (0%)
 Frame = +3

Query: 24   ELLKRLVKKREDVKRKLKEAKGLKIQQFDITQQALKLTANSIYGCLGSSNSRFYAKPLAE 203
            ELLK LV++R  VK  +K A GLK+QQ DI QQALKLTANS+YGCLG SNSRFYAKPLAE
Sbjct: 744  ELLKNLVERRRMVKSWMKNASGLKVQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAE 803

Query: 204  LITLQGREILQSTVDLVQNTLNLEVIYGDTDSIMIYSGSNDIGNAKAIATKVTQEVNKKY 383
            LITLQGREILQSTVDLVQN LNLEVIYGDTDSIMIYSG +DI  AKAIA KV QEVNKKY
Sbjct: 804  LITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGLDDIPKAKAIAGKVIQEVNKKY 863

Query: 384  RCLKIHPDCFYKRMXXXXXXXYAAVKIQ--DGVPYEVIERKGLDMVRRDWSMLAKEVGDF 557
            RCL+I  D  YKRM       YAAVK+Q  DG PYEVIERKGLDMVRRDWS+L+KE+GDF
Sbjct: 864  RCLEIDLDGLYKRMLLLKKKKYAAVKVQFKDGTPYEVIERKGLDMVRRDWSLLSKELGDF 923

Query: 558  CLSQILSDSSREAVVESIHKSLMKVQEDMKNGQIELEKYIITKSLTKPPEAYPDAKSQPH 737
            CL+QILS  S E V+ESIH SLMKVQEDM++GQ+ LEKY+ITK+LTKPPEAYPDAK+QPH
Sbjct: 924  CLAQILSGGSCEDVIESIHNSLMKVQEDMRSGQVALEKYVITKTLTKPPEAYPDAKNQPH 983

Query: 738  VEVAL 752
              VAL
Sbjct: 984  ALVAL 988



 Score =  194 bits (492), Expect = 6e-47
 Identities = 94/154 (61%), Positives = 115/154 (74%), Gaps = 5/154 (3%)
 Frame = +3

Query: 933  ARHPDELKRDNENWIIDINYYLAQQIHPVVSRLCASIEGTSPARLADCLGLDSSKFQSKS 1112
            ARHPDELK D+  WIIDI YYL+QQIHPVVSRLCASI+GTSP RLADCLGLDSSKF+SKS
Sbjct: 1029 ARHPDELKCDDGKWIIDIEYYLSQQIHPVVSRLCASIQGTSPERLADCLGLDSSKFRSKS 1088

Query: 1113 GEAIMHDPSTSLLYTTDDEERYRCCNPLVLSCPSCSAMLECPPIYPSV-VQILADTEG-- 1283
             E++   PS+SLL+  DDEERY+ C PL+LSCPSCS    CPP++ S+   IL  ++   
Sbjct: 1089 SESV---PSSSLLFAADDEERYQSCEPLILSCPSCSGTFHCPPVFISICTSILEKSKNPQ 1145

Query: 1284 --RMARNIWLKLRCSRCPEEGDVGKFSTASIRNQ 1379
                  N W +L C +CPEEGD+G+ S A++ NQ
Sbjct: 1146 IEESISNFWHRLCCPKCPEEGDLGRISPATMANQ 1179


>emb|CBI21412.3| unnamed protein product [Vitis vinifera]
          Length = 1561

 Score =  361 bits (926), Expect = 3e-97
 Identities = 190/244 (77%), Positives = 209/244 (85%), Gaps = 2/244 (0%)
 Frame = +3

Query: 27   LLKRLVKKREDVKRKLKEAKGLKIQQFDITQQALKLTANSIYGCLGSSNSRFYAKPLAEL 206
            LLK+LV++R+ VK +LK A GLK+QQ DI QQALKLTANS+YGCLG SNSRFYAKPLAEL
Sbjct: 999  LLKKLVERRKTVKSRLKTASGLKVQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAEL 1058

Query: 207  ITLQGREILQSTVDLVQNTLNLEVIYGDTDSIMIYSGSNDIGNAKAIATKVTQEVNKKYR 386
            ITLQGREILQSTVDLVQN LNLEVIYGDTDSIMIY+G +DI  AKAIA KV QEVNKKYR
Sbjct: 1059 ITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYTGLDDITKAKAIAGKVIQEVNKKYR 1118

Query: 387  CLKIHPDCFYKRMXXXXXXXYAAVKIQ--DGVPYEVIERKGLDMVRRDWSMLAKEVGDFC 560
            CL+I  D  YKRM       YAAVK+Q  DG PYEVIERKGLDMVRRDWS+L+KE+GDF 
Sbjct: 1119 CLEIDLDGLYKRMLLLKKKKYAAVKLQFKDGTPYEVIERKGLDMVRRDWSLLSKELGDFS 1178

Query: 561  LSQILSDSSREAVVESIHKSLMKVQEDMKNGQIELEKYIITKSLTKPPEAYPDAKSQPHV 740
            LSQILS  S E VVESIH SLMKVQEDM+NG++ LEKYIITKSLTKPPEAYPD K+QPHV
Sbjct: 1179 LSQILSGGSCEDVVESIHNSLMKVQEDMRNGEVALEKYIITKSLTKPPEAYPD-KNQPHV 1237

Query: 741  EVAL 752
            +VAL
Sbjct: 1238 QVAL 1241



 Score =  194 bits (493), Expect = 5e-47
 Identities = 97/153 (63%), Positives = 115/153 (75%), Gaps = 4/153 (2%)
 Frame = +3

Query: 933  ARHPDELKRDNENWIIDINYYLAQQIHPVVSRLCASIEGTSPARLADCLGLDSSKFQSKS 1112
            ARHPDELKRDN  W+IDI+YYLAQQIHPVVSRLCASI+GTSPARLADCLGLDSSKFQS+ 
Sbjct: 1280 ARHPDELKRDNGKWMIDIDYYLAQQIHPVVSRLCASIQGTSPARLADCLGLDSSKFQSRR 1339

Query: 1113 GEAIMHDPSTSLLYTTDDEERYRCCNPLVLSCPSCSAMLECPPIYPSVVQILADTEGRM- 1289
             EAI +D S SLL  + DEERYR C  L+LSCPSC    +CP ++ SV   + +   ++ 
Sbjct: 1340 SEAINNDFSISLL--SADEERYRGCEHLILSCPSCFGTFDCPTLFNSVHTSITEKSTQVQ 1397

Query: 1290 ---ARNIWLKLRCSRCPEEGDVGKFSTASIRNQ 1379
               + N W +LRC +CPEEGDVG+ S A I NQ
Sbjct: 1398 VEESNNFWQRLRCPKCPEEGDVGRMSPALIANQ 1430