BLASTX nr result

ID: Lithospermum22_contig00009549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00009549
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]   100   1e-19
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]   100   1e-19
emb|CAN77295.1| hypothetical protein VITISV_005638 [Vitis vinifera]    97   1e-18
emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]    96   4e-18
gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Ho...    95   7e-18

>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
          Length = 1402

 Score =  100 bits (249), Expect = 1e-19
 Identities = 56/169 (33%), Positives = 79/169 (46%), Gaps = 6/169 (3%)
 Frame = -2

Query: 490 DQVTRRPLISRTSRNGLYQFPXXXXXXXXXXXXXXXXXXXXXXL------WHHRLGHSHD 329
           D  T+R L      NGLY+FP                      +      WHHRLGH+  
Sbjct: 436 DLHTKRVLAQGKLENGLYKFPVISNKKTAYVGITNDSTFQCSNIENKRELWHHRLGHAAT 495

Query: 328 GTFRKLAHQFNWSPVLNSSQSCTACPLGXXXXXXXXXXXXXSTQPLELIFSDLWGPASQM 149
               ++ H  N S     +  C++C L              +++PLEL+++D+WGPAS  
Sbjct: 496 DIVTRIMHNCNVSCGKYKATVCSSCQLAKSHRLPTHLSSFHASKPLELVYTDIWGPASVT 555

Query: 148 SMDGNRYSLIFVDDFLRFIWFYPLAQKSDALHVFKRFQAFVERQFTLKI 2
           S  G +Y ++FVDD+ R+ W Y L  K  AL +FK F+  VE QF  KI
Sbjct: 556 STSGAKYFILFVDDYSRYTWLYLLQSKDQALPIFKXFKLQVENQFEAKI 604


>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score =  100 bits (249), Expect = 1e-19
 Identities = 59/169 (34%), Positives = 79/169 (46%), Gaps = 6/169 (3%)
 Frame = -2

Query: 490 DQVTRRPLISRTSRNGLYQFPXXXXXXXXXXXXXXXXXXXXXXL------WHHRLGHSHD 329
           DQVT++ L+  +  +GLY+FP                      L      WH RLGH  D
Sbjct: 472 DQVTKKILLQGSLEHGLYRFPARFVPSPAAFVSSSYDRSSNLSLTTTTTLWHSRLGHPAD 531

Query: 328 GTFRKLAHQFNWSPVLNSSQSCTACPLGXXXXXXXXXXXXXSTQPLELIFSDLWGPASQM 149
              + +    N S   + +  C AC                ++ PL L+ +DLWGP S  
Sbjct: 532 NILKHILTSCNISHQCHKNNVCCACQFAKSHKLPFNVXVSRASHPLALLHADLWGPXSIP 591

Query: 148 SMDGNRYSLIFVDDFLRFIWFYPLAQKSDALHVFKRFQAFVERQFTLKI 2
           S  G RY ++FVDDF RF W YPL  K  AL VF +F++ VE QF  +I
Sbjct: 592 STTGARYFILFVDDFSRFSWIYPLHSKDQALSVFIKFKSLVENQFNSRI 640


>emb|CAN77295.1| hypothetical protein VITISV_005638 [Vitis vinifera]
          Length = 1198

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 50/127 (39%), Positives = 67/127 (52%), Gaps = 8/127 (6%)
 Frame = -2

Query: 358 WHHRLGHSHDGTFRKLAHQFNWSPVLNS--------SQSCTACPLGXXXXXXXXXXXXXS 203
           WHHRLGH+      ++    N S   N         S  C++C L              +
Sbjct: 387 WHHRLGHASTNIVTQIMQSCNVSFEKNKNTVCSTVCSTVCSSCQLAKSHRLPTHLSLSCA 446

Query: 202 TQPLELIFSDLWGPASQMSMDGNRYSLIFVDDFLRFIWFYPLAQKSDALHVFKRFQAFVE 23
           ++PLEL+ +DLWGPAS  S  G RY ++F+DD+ R+ WFYPL  K  AL  FK+F+  VE
Sbjct: 447 SKPLELVHTDLWGPASVKSTSGARYFILFLDDYSRYTWFYPLQTKDQALPAFKKFKLQVE 506

Query: 22  RQFTLKI 2
            QF  KI
Sbjct: 507 NQFDAKI 513


>emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]
          Length = 1007

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 55/169 (32%), Positives = 75/169 (44%), Gaps = 6/169 (3%)
 Frame = -2

Query: 490 DQVTRRPLISRTSRNGLYQFPXXXXXXXXXXXXXXXXXXXXXXL------WHHRLGHSHD 329
           DQVT++ L+  +  +GLY+FP                      L      WH RLGH  D
Sbjct: 124 DQVTKKILLQGSLEHGLYRFPARFVPSPTAFVSSSYDRSSNISLTTITTLWHSRLGHPAD 183

Query: 328 GTFRKLAHQFNWSPVLNSSQSCTACPLGXXXXXXXXXXXXXSTQPLELIFSDLWGPASQM 149
              + +    N S   + +  C AC                ++ P  L+ +DLWGP S  
Sbjct: 184 NILKHILTSCNISHQCHKNNVCCACQFAKSHKLPFNVSVSRASHPFALLHADLWGPTSIP 243

Query: 148 SMDGNRYSLIFVDDFLRFIWFYPLAQKSDALHVFKRFQAFVERQFTLKI 2
           S  G RY ++FVDDF  F W YPL  K  AL  F +F++ VE QF  +I
Sbjct: 244 STTGARYFILFVDDFSHFSWIYPLHSKDQALSXFIKFKSLVENQFNSRI 292


>gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
           sativa Japonica Group]
           gi|14718304|gb|AAK72882.1|AC091123_1 putative gag-pol
           protein [Oryza sativa Japonica Group]
          Length = 1219

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 61/166 (36%), Positives = 78/166 (46%), Gaps = 3/166 (1%)
 Frame = -2

Query: 490 DQVTRRPLISRTSRNGLYQFPXXXXXXXXXXXXXXXXXXXXXXLWHHRLGHSHDGTFRKL 311
           D+VTRR ++    R  LY  P                       WH RLGH+      ++
Sbjct: 408 DKVTRRTILEGPCRRDLYPLPAGDPIKQVFAVMPSFER------WHGRLGHASKPIVLRV 461

Query: 310 AHQFNWSPVLNSSQS---CTACPLGXXXXXXXXXXXXXSTQPLELIFSDLWGPASQMSMD 140
            +Q N  P  N S S   C AC  G             S+ PLELI SD+WGPAS  S+ 
Sbjct: 462 INQ-NKLPCSNESPSESVCDACQQGKSHQLPFPKFFSVSSNPLELIHSDVWGPASD-SVG 519

Query: 139 GNRYSLIFVDDFLRFIWFYPLAQKSDALHVFKRFQAFVERQFTLKI 2
             RY + F+DD+ +F+W Y L  KS+    FK FQ+ VERQF  KI
Sbjct: 520 AKRYYVSFIDDYSKFVWIYFLKFKSEVFEKFKEFQSMVERQFNRKI 565


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