BLASTX nr result

ID: Lithospermum22_contig00009472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00009472
         (1521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264648.1| PREDICTED: ribosome biogenesis regulatory pr...   159   2e-36
ref|XP_003549765.1| PREDICTED: ribosome biogenesis regulatory pr...   154   8e-35
ref|XP_003542686.1| PREDICTED: ribosome biogenesis regulatory pr...   152   2e-34
ref|XP_003542685.1| PREDICTED: ribosome biogenesis regulatory pr...   152   2e-34
emb|CBI40495.3| unnamed protein product [Vitis vinifera]              152   3e-34

>ref|XP_002264648.1| PREDICTED: ribosome biogenesis regulatory protein homolog [Vitis
           vinifera] gi|296088996|emb|CBI38699.3| unnamed protein
           product [Vitis vinifera]
          Length = 327

 Score =  159 bits (402), Expect = 2e-36
 Identities = 76/111 (68%), Positives = 94/111 (84%)
 Frame = +3

Query: 3   SLPITGTQTAPRKVSKDELQHVXXXXXXXXXXXXKFDKKLPGEKQLKHEKKYRKYLPVVE 182
           +LPITGTQTAP+KVSK+EL+ V            KFDKKLPGEK  KH+ KYRK+LPVVE
Sbjct: 187 ALPITGTQTAPKKVSKNELEDVASMAATATASGGKFDKKLPGEKPEKHKGKYRKFLPVVE 246

Query: 183 GTGMASLERQQTEKVLNKLISKNSHELVNVEKAVNMYNVKEDKKRRNQKGK 335
           GTG+ SLE+QQTEK+LNKLISKNSHE++NV+KA+NMYNVK++KKR+N++GK
Sbjct: 247 GTGIGSLEKQQTEKILNKLISKNSHEILNVDKAINMYNVKKEKKRKNRQGK 297


>ref|XP_003549765.1| PREDICTED: ribosome biogenesis regulatory protein homolog [Glycine
           max]
          Length = 331

 Score =  154 bits (388), Expect = 8e-35
 Identities = 75/115 (65%), Positives = 92/115 (80%)
 Frame = +3

Query: 3   SLPITGTQTAPRKVSKDELQHVXXXXXXXXXXXXKFDKKLPGEKQLKHEKKYRKYLPVVE 182
           +LPITGTQ AP+KV+KDEL +V            KFDKKL GEK  KHE KYRK+LPVVE
Sbjct: 191 ALPITGTQAAPKKVTKDELGNVAGIAATATASGGKFDKKLAGEKPQKHEGKYRKFLPVVE 250

Query: 183 GTGMASLERQQTEKVLNKLISKNSHELVNVEKAVNMYNVKEDKKRRNQKGKSFTS 347
           GTG+ SLER+QTEK+LNK+ISKNSH ++NVEKAV M+NVK++KKRR++KGK+  S
Sbjct: 251 GTGIGSLEREQTEKILNKIISKNSHNILNVEKAVTMHNVKKEKKRRSEKGKALAS 305


>ref|XP_003542686.1| PREDICTED: ribosome biogenesis regulatory protein homolog isoform 2
           [Glycine max]
          Length = 286

 Score =  152 bits (384), Expect = 2e-34
 Identities = 74/112 (66%), Positives = 91/112 (81%)
 Frame = +3

Query: 3   SLPITGTQTAPRKVSKDELQHVXXXXXXXXXXXXKFDKKLPGEKQLKHEKKYRKYLPVVE 182
           +LPITGTQ AP+KV+KDEL +V            KFDKKL GEK  KHE KYRK+LPVVE
Sbjct: 147 ALPITGTQAAPKKVTKDELGNVAGIAATATASGGKFDKKLAGEKPQKHEGKYRKFLPVVE 206

Query: 183 GTGMASLERQQTEKVLNKLISKNSHELVNVEKAVNMYNVKEDKKRRNQKGKS 338
           GTG+ SLER+QTEK+LNK+ISKNSH ++NVEKAV M+NVK++KKRR++KGK+
Sbjct: 207 GTGIGSLEREQTEKILNKIISKNSHNILNVEKAVTMHNVKKEKKRRSEKGKA 258


>ref|XP_003542685.1| PREDICTED: ribosome biogenesis regulatory protein homolog isoform 1
           [Glycine max]
          Length = 332

 Score =  152 bits (384), Expect = 2e-34
 Identities = 74/112 (66%), Positives = 91/112 (81%)
 Frame = +3

Query: 3   SLPITGTQTAPRKVSKDELQHVXXXXXXXXXXXXKFDKKLPGEKQLKHEKKYRKYLPVVE 182
           +LPITGTQ AP+KV+KDEL +V            KFDKKL GEK  KHE KYRK+LPVVE
Sbjct: 193 ALPITGTQAAPKKVTKDELGNVAGIAATATASGGKFDKKLAGEKPQKHEGKYRKFLPVVE 252

Query: 183 GTGMASLERQQTEKVLNKLISKNSHELVNVEKAVNMYNVKEDKKRRNQKGKS 338
           GTG+ SLER+QTEK+LNK+ISKNSH ++NVEKAV M+NVK++KKRR++KGK+
Sbjct: 253 GTGIGSLEREQTEKILNKIISKNSHNILNVEKAVTMHNVKKEKKRRSEKGKA 304


>emb|CBI40495.3| unnamed protein product [Vitis vinifera]
          Length = 328

 Score =  152 bits (383), Expect = 3e-34
 Identities = 73/111 (65%), Positives = 90/111 (81%)
 Frame = +3

Query: 3   SLPITGTQTAPRKVSKDELQHVXXXXXXXXXXXXKFDKKLPGEKQLKHEKKYRKYLPVVE 182
           +LPITGTQ AP+K SK+ELQ +            KFDKKL GEK  KH+ KYRK+LPVVE
Sbjct: 187 ALPITGTQAAPKKASKNELQDIASMAAAATASGGKFDKKLVGEKPEKHKGKYRKFLPVVE 246

Query: 183 GTGMASLERQQTEKVLNKLISKNSHELVNVEKAVNMYNVKEDKKRRNQKGK 335
           GTG+ S E+QQTEKVLN+LISKNSHE++NV+KA+NMYNVK++KKR+NQ+GK
Sbjct: 247 GTGIGSQEKQQTEKVLNRLISKNSHEILNVDKAINMYNVKKEKKRKNQRGK 297


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