BLASTX nr result

ID: Lithospermum22_contig00009338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00009338
         (676 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529044.1| Heterogeneous nuclear ribonucleoprotein 27C,...   337   1e-90
emb|CBI26733.3| unnamed protein product [Vitis vinifera]              330   2e-88
ref|XP_002274589.1| PREDICTED: uncharacterized protein LOC100267...   330   2e-88
emb|CAN75218.1| hypothetical protein VITISV_003519 [Vitis vinifera]   330   2e-88
ref|XP_002300356.1| predicted protein [Populus trichocarpa] gi|2...   329   3e-88

>ref|XP_002529044.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
           communis] gi|223531524|gb|EEF33355.1| Heterogeneous
           nuclear ribonucleoprotein 27C, putative [Ricinus
           communis]
          Length = 478

 Score =  337 bits (864), Expect = 1e-90
 Identities = 165/188 (87%), Positives = 175/188 (93%)
 Frame = +3

Query: 108 MEQDLCKLFIGGISWDTDEERLTEYFKLYGEVVEAVIMRDRNTGRARGFGFIVFADPSVA 287
           ME DL KLFIGGISWDTDEERL EYF  YGEVVEAVIMRDR TGRARGFGF+VFADP+VA
Sbjct: 1   MESDLGKLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRTTGRARGFGFVVFADPAVA 60

Query: 288 ERVANEKHMIDGRSVEAKKAVPRDDQSILSRNISSIQGSPGPGRSKKIFVGGLASSVTES 467
           ERV  +KHMIDGR+VEAKKAVPRDDQ IL+RN SSI GSPGPGR+KKIFVGGLAS+VT++
Sbjct: 61  ERVIVDKHMIDGRTVEAKKAVPRDDQHILNRNTSSIHGSPGPGRTKKIFVGGLASTVTDN 120

Query: 468 DFKNYFEQFGNITDVVVMYDHNTQRPRGFGFITYDTEDAVDRVLHKTFHELNGKMVEVKR 647
           DFK YFEQFGNITDVVVMYDHNTQRPRGFGFITYD+EDAVDRVLHKTFHELNGKMVEVKR
Sbjct: 121 DFKKYFEQFGNITDVVVMYDHNTQRPRGFGFITYDSEDAVDRVLHKTFHELNGKMVEVKR 180

Query: 648 AVPKEQSP 671
           AVPKE SP
Sbjct: 181 AVPKELSP 188


>emb|CBI26733.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score =  330 bits (846), Expect = 2e-88
 Identities = 159/188 (84%), Positives = 173/188 (92%)
 Frame = +3

Query: 108 MEQDLCKLFIGGISWDTDEERLTEYFKLYGEVVEAVIMRDRNTGRARGFGFIVFADPSVA 287
           ME DL KLFIGGISWDTDE+RL EYF+ YGEVVEAVIMRDR TGRARGFGF+VFADP+VA
Sbjct: 1   MESDLGKLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVA 60

Query: 288 ERVANEKHMIDGRSVEAKKAVPRDDQSILSRNISSIQGSPGPGRSKKIFVGGLASSVTES 467
           ERV  +KHMIDGR+VEAKKAVPRDDQ +L+RN  SI GSPGPGR+KKIFVGGLAS+VTES
Sbjct: 61  ERVVMDKHMIDGRTVEAKKAVPRDDQHLLNRNTGSIHGSPGPGRTKKIFVGGLASTVTES 120

Query: 468 DFKNYFEQFGNITDVVVMYDHNTQRPRGFGFITYDTEDAVDRVLHKTFHELNGKMVEVKR 647
           DFK YF+QFG I DVVVMYDHNTQRPRGFGFITYD+E+AV+RVLHKTFHELNGKMVEVKR
Sbjct: 121 DFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLHKTFHELNGKMVEVKR 180

Query: 648 AVPKEQSP 671
           AVPKE SP
Sbjct: 181 AVPKEHSP 188


>ref|XP_002274589.1| PREDICTED: uncharacterized protein LOC100267443 [Vitis vinifera]
          Length = 478

 Score =  330 bits (846), Expect = 2e-88
 Identities = 159/188 (84%), Positives = 173/188 (92%)
 Frame = +3

Query: 108 MEQDLCKLFIGGISWDTDEERLTEYFKLYGEVVEAVIMRDRNTGRARGFGFIVFADPSVA 287
           ME DL KLFIGGISWDTDE+RL EYF+ YGEVVEAVIMRDR TGRARGFGF+VFADP+VA
Sbjct: 1   MESDLGKLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVA 60

Query: 288 ERVANEKHMIDGRSVEAKKAVPRDDQSILSRNISSIQGSPGPGRSKKIFVGGLASSVTES 467
           ERV  +KHMIDGR+VEAKKAVPRDDQ +L+RN  SI GSPGPGR+KKIFVGGLAS+VTES
Sbjct: 61  ERVVMDKHMIDGRTVEAKKAVPRDDQHLLNRNTGSIHGSPGPGRTKKIFVGGLASTVTES 120

Query: 468 DFKNYFEQFGNITDVVVMYDHNTQRPRGFGFITYDTEDAVDRVLHKTFHELNGKMVEVKR 647
           DFK YF+QFG I DVVVMYDHNTQRPRGFGFITYD+E+AV+RVLHKTFHELNGKMVEVKR
Sbjct: 121 DFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLHKTFHELNGKMVEVKR 180

Query: 648 AVPKEQSP 671
           AVPKE SP
Sbjct: 181 AVPKEHSP 188


>emb|CAN75218.1| hypothetical protein VITISV_003519 [Vitis vinifera]
          Length = 482

 Score =  330 bits (846), Expect = 2e-88
 Identities = 159/188 (84%), Positives = 173/188 (92%)
 Frame = +3

Query: 108 MEQDLCKLFIGGISWDTDEERLTEYFKLYGEVVEAVIMRDRNTGRARGFGFIVFADPSVA 287
           ME DL KLFIGGISWDTDE+RL EYF+ YGEVVEAVIMRDR TGRARGFGF+VFADP+VA
Sbjct: 1   MESDLGKLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVA 60

Query: 288 ERVANEKHMIDGRSVEAKKAVPRDDQSILSRNISSIQGSPGPGRSKKIFVGGLASSVTES 467
           ERV  +KHMIDGR+VEAKKAVPRDDQ +L+RN  SI GSPGPGR+KKIFVGGLAS+VTES
Sbjct: 61  ERVVMDKHMIDGRTVEAKKAVPRDDQHLLNRNTGSIHGSPGPGRTKKIFVGGLASTVTES 120

Query: 468 DFKNYFEQFGNITDVVVMYDHNTQRPRGFGFITYDTEDAVDRVLHKTFHELNGKMVEVKR 647
           DFK YF+QFG I DVVVMYDHNTQRPRGFGFITYD+E+AV+RVLHKTFHELNGKMVEVKR
Sbjct: 121 DFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLHKTFHELNGKMVEVKR 180

Query: 648 AVPKEQSP 671
           AVPKE SP
Sbjct: 181 AVPKEHSP 188


>ref|XP_002300356.1| predicted protein [Populus trichocarpa] gi|222847614|gb|EEE85161.1|
           predicted protein [Populus trichocarpa]
          Length = 478

 Score =  329 bits (843), Expect = 3e-88
 Identities = 163/188 (86%), Positives = 172/188 (91%)
 Frame = +3

Query: 108 MEQDLCKLFIGGISWDTDEERLTEYFKLYGEVVEAVIMRDRNTGRARGFGFIVFADPSVA 287
           ME DL KLFIGGISWDTDEERL EYF  YGEVVEAVIMRDR TGRARGFGF+VFADP VA
Sbjct: 1   MESDLGKLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRVTGRARGFGFVVFADPIVA 60

Query: 288 ERVANEKHMIDGRSVEAKKAVPRDDQSILSRNISSIQGSPGPGRSKKIFVGGLASSVTES 467
           ERV  EKH++DGR+VEAKKAVPRDDQ ILSRN SSI GSPGPGR+KKIFVGGLAS+VTE+
Sbjct: 61  ERVIMEKHVVDGRTVEAKKAVPRDDQHILSRNTSSIHGSPGPGRTKKIFVGGLASTVTEN 120

Query: 468 DFKNYFEQFGNITDVVVMYDHNTQRPRGFGFITYDTEDAVDRVLHKTFHELNGKMVEVKR 647
           DFK YFEQFG ITDVVVMYDHNT RPRGFGFITYD+E+AVDRVLHKTFHELNGKMVEVKR
Sbjct: 121 DFKKYFEQFGIITDVVVMYDHNTLRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKR 180

Query: 648 AVPKEQSP 671
           AVPKE SP
Sbjct: 181 AVPKELSP 188


Top