BLASTX nr result
ID: Lithospermum22_contig00009311
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00009311
(2685 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002531582.1| serine/arginine rich splicing factor, putati... 100 3e-18
emb|CBI16510.3| unnamed protein product [Vitis vinifera] 98 1e-17
ref|NP_001173443.1| Os03g0374575 [Oryza sativa Japonica Group] g... 97 2e-17
gb|AAP46199.1| putative splicing factor [Oryza sativa Japonica G... 97 2e-17
gb|AAG51556.1|AC027034_2 unknown protein; 47745-45927 [Arabidops... 95 9e-17
>ref|XP_002531582.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528778|gb|EEF30785.1| serine/arginine rich
splicing factor, putative [Ricinus communis]
Length = 216
Score = 100 bits (248), Expect = 3e-18
Identities = 62/130 (47%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Frame = -2
Query: 779 DPRGFGFVQYLDPDDVVDAKHHMDGKVFQGRQLTVVFAEKNRKKPTEMRARDCGRNRVYD 600
+PRGFGFVQY+DP D DAKHHMDG++ GR+LTVVFAE+NRKKP EMRAR+ R R YD
Sbjct: 79 EPRGFGFVQYVDPADAADAKHHMDGEILLGRELTVVFAEENRKKPAEMRARERVRGRSYD 138
Query: 599 XXXXXXXXXXPLGKXXXXXXXXXXXXXXXSFSPSPARYSRSLSRSPVRDQSPLYEAESP- 423
+S SP RY RS SR SPLY + SP
Sbjct: 139 -----------------------RKRSPQCYSRSP-RYRRSYSR------SPLYYSRSPR 168
Query: 422 ----ARDISP 405
+R ISP
Sbjct: 169 QRNYSRSISP 178
Score = 77.8 bits (190), Expect = 1e-11
Identities = 38/50 (76%), Positives = 40/50 (80%)
Frame = -1
Query: 1602 PSPRGRYGGYFSTDGPTSLLVRNL*HDCRPDDLRRPFGQFGQLKDVYLPR 1453
PSPR RYGG S D PTSLLVRNL HDCR +DLR PFG FG LKD+YLPR
Sbjct: 25 PSPRNRYGGR-SRDLPTSLLVRNLRHDCRTEDLRGPFGHFGPLKDIYLPR 73
>emb|CBI16510.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 97.8 bits (242), Expect = 1e-17
Identities = 56/123 (45%), Positives = 73/123 (59%), Gaps = 5/123 (4%)
Frame = -2
Query: 800 LEMELISDPRGFGFVQYLDPDDVVDAKHHMDGKVFQGRQLTVVFAEKNRKKPTEMRARDC 621
L++ L +PRGFGFVQY+DP D +AK+ MDG++ GR+LTVVFAE+NRKKP++MRAR+
Sbjct: 94 LKLTLAREPRGFGFVQYVDPADAAEAKYQMDGQILHGRELTVVFAEENRKKPSDMRARER 153
Query: 620 GRNRVYDXXXXXXXXXXPLGKXXXXXXXXXXXXXXXSFSPSPAR--YSRSLS---RSPVR 456
GR R YD + +SPSP R YSRS+S R R
Sbjct: 154 GRGRFYD----RRRSPLRYSRSPPPRHARSPSRGRDYYSPSPKRRQYSRSVSPQDRRYSR 209
Query: 455 DQS 447
D+S
Sbjct: 210 DRS 212
Score = 83.6 bits (205), Expect = 3e-13
Identities = 41/51 (80%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
Frame = -1
Query: 1602 PSPRGRYGGYFST-DGPTSLLVRNL*HDCRPDDLRRPFGQFGQLKDVYLPR 1453
PSPRGRYGG S D PTSLLVRNL HDCR +DLRRPFGQFG LKD+YLPR
Sbjct: 21 PSPRGRYGGRGSARDLPTSLLVRNLRHDCRGEDLRRPFGQFGPLKDIYLPR 71
>ref|NP_001173443.1| Os03g0374575 [Oryza sativa Japonica Group]
gi|255674538|dbj|BAH92171.1| Os03g0374575 [Oryza sativa
Japonica Group]
Length = 251
Score = 97.4 bits (241), Expect = 2e-17
Identities = 56/132 (42%), Positives = 71/132 (53%), Gaps = 7/132 (5%)
Frame = -2
Query: 779 DPRGFGFVQYLDPDDVVDAKHHMDGKVFQGRQLTVVFAEKNRKKPTEMRARD--CGRNRV 606
+PRGFGF+QY DP+D DAK+HMDG++ GR++TVVFAE+NRKKP+EMRAR+ R+R
Sbjct: 83 EPRGFGFIQYYDPEDAADAKYHMDGQILLGREVTVVFAEENRKKPSEMRARERVGSRDRS 142
Query: 605 YDXXXXXXXXXXPLG-----KXXXXXXXXXXXXXXXSFSPSPARYSRSLSRSPVRDQSPL 441
YD + +S SPAR RSLSRSP +S
Sbjct: 143 YDRRSRSPRYSRSRSPVYSPRSRSRSRSYSPAPKRKHYSRSPARRERSLSRSPADSRSRS 202
Query: 440 YEAESPARDISP 405
R SP
Sbjct: 203 RSLSDDRRSKSP 214
Score = 82.8 bits (203), Expect = 4e-13
Identities = 39/50 (78%), Positives = 43/50 (86%)
Frame = -1
Query: 1602 PSPRGRYGGYFSTDGPTSLLVRNL*HDCRPDDLRRPFGQFGQLKDVYLPR 1453
PSPRGRYGG D PTSLLVRNL DCRPDDLRRPFG+FG++KD+YLPR
Sbjct: 29 PSPRGRYGGR-DRDLPTSLLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPR 77
>gb|AAP46199.1| putative splicing factor [Oryza sativa Japonica Group]
gi|108708412|gb|ABF96207.1| RNA recognition motif family
protein, expressed [Oryza sativa Japonica Group]
gi|218192921|gb|EEC75348.1| hypothetical protein
OsI_11773 [Oryza sativa Indica Group]
gi|222625002|gb|EEE59134.1| hypothetical protein
OsJ_11026 [Oryza sativa Japonica Group]
Length = 217
Score = 97.4 bits (241), Expect = 2e-17
Identities = 56/132 (42%), Positives = 71/132 (53%), Gaps = 7/132 (5%)
Frame = -2
Query: 779 DPRGFGFVQYLDPDDVVDAKHHMDGKVFQGRQLTVVFAEKNRKKPTEMRARD--CGRNRV 606
+PRGFGF+QY DP+D DAK+HMDG++ GR++TVVFAE+NRKKP+EMRAR+ R+R
Sbjct: 76 EPRGFGFIQYYDPEDAADAKYHMDGQILLGREVTVVFAEENRKKPSEMRARERVGSRDRS 135
Query: 605 YDXXXXXXXXXXPLG-----KXXXXXXXXXXXXXXXSFSPSPARYSRSLSRSPVRDQSPL 441
YD + +S SPAR RSLSRSP +S
Sbjct: 136 YDRRSRSPRYSRSRSPVYSPRSRSRSRSYSPAPKRKHYSRSPARRERSLSRSPADSRSRS 195
Query: 440 YEAESPARDISP 405
R SP
Sbjct: 196 RSLSDDRRSKSP 207
Score = 82.8 bits (203), Expect = 4e-13
Identities = 39/50 (78%), Positives = 43/50 (86%)
Frame = -1
Query: 1602 PSPRGRYGGYFSTDGPTSLLVRNL*HDCRPDDLRRPFGQFGQLKDVYLPR 1453
PSPRGRYGG D PTSLLVRNL DCRPDDLRRPFG+FG++KD+YLPR
Sbjct: 22 PSPRGRYGGR-DRDLPTSLLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPR 70
>gb|AAG51556.1|AC027034_2 unknown protein; 47745-45927 [Arabidopsis thaliana]
Length = 220
Score = 95.1 bits (235), Expect = 9e-17
Identities = 59/146 (40%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Frame = -2
Query: 779 DPRGFGFVQYLDPDDVVDAKHHMDGKVFQGRQLTVVFAEKNRKKPTEMRARDCGRNRVYD 600
DPRGFGFVQ++DP D DAKHHMDG + GR+LTVVFAE+NRKKPTEMRAR+ G R D
Sbjct: 75 DPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPTEMRARERGGGRFRD 134
Query: 599 XXXXXXXXXXPLGKXXXXXXXXXXXXXXXSFSPSPAR-YSRSLSRSPVRDQSPLYEAESP 423
+ +SP P R + RS+S R + SP
Sbjct: 135 RRRTPPRYYSR-SRSPPPRRGRSRSRSGDYYSPPPRRHHPRSISPREERYDGRRSYSRSP 193
Query: 422 ARDISPVKXXXXGYFSSRGVVMGVQE 345
A D S + SR + ++E
Sbjct: 194 ASDGSRGRSLTPVRGKSRSLTPALEE 219
Score = 76.3 bits (186), Expect = 4e-11
Identities = 37/50 (74%), Positives = 41/50 (82%)
Frame = -1
Query: 1602 PSPRGRYGGYFSTDGPTSLLVRNL*HDCRPDDLRRPFGQFGQLKDVYLPR 1453
PSPRGRYGG S D PTSLLVRNL HDCR +DLR+ F QFG +KD+YLPR
Sbjct: 21 PSPRGRYGGR-SRDLPTSLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPR 69