BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00009280
         (1406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282861.1| PREDICTED: DNA polymerase III polC-type-like...   182   1e-85
emb|CBI39565.3| unnamed protein product [Vitis vinifera]              175   1e-83
ref|XP_002512483.1| exonuclease, putative [Ricinus communis] gi|...   179   2e-79
ref|XP_003521673.1| PREDICTED: DNA polymerase III polC-type-like...   169   2e-76
ref|XP_003626171.1| DNA polymerase III polC-type [Medicago trunc...   162   8e-76

>ref|XP_002282861.1| PREDICTED: DNA polymerase III polC-type-like isoform 2 [Vitis
            vinifera] gi|225450651|ref|XP_002282855.1| PREDICTED: DNA
            polymerase III polC-type-like isoform 1 [Vitis vinifera]
          Length = 337

 Score =  182 bits (462), Expect(2) = 1e-85
 Identities = 98/199 (49%), Positives = 128/199 (64%), Gaps = 3/199 (1%)
 Frame = -3

Query: 1170 MRTVAMCFSLMQFPRCRIHTLSSSWWGCFQQHGQRYTEVHGSKVHCLNKYDPEGGFTRKW 991
            MRTV MCFS++Q PRCRIHTL+S W   F   G         K+   +    EGG +R+W
Sbjct: 1    MRTVPMCFSILQVPRCRIHTLASFWRESFHSLGSTCRSSSSFKLLGSHTNGLEGGNSRRW 60

Query: 990  IRRTVTTKTLTGKGSVT---KKTTIQRELTNETLGTSTNAYTPEITELESTQVESVQYYN 820
             RR +TTK+  G+   T   K++ I+ E+ + T+ TST      + +LE ++ + +QY  
Sbjct: 61   TRRPITTKS-EGRNKYTQSSKRSNIRHEIVDGTVSTSTKLI---VDKLEISESQRIQYCE 116

Query: 819  IQQVVAENKDISKFVTYLVFDIETTGFSRENDRIIEIAIQDLRGGKNSTFQTLVNPGCAI 640
            +Q+ V ENKD++K VT +VFD ETTG SR NDRIIEI +QDL GG+NSTFQTLVNP   +
Sbjct: 117  VQEKVTENKDLAKLVTVIVFDTETTGLSRANDRIIEIGLQDLGGGENSTFQTLVNPERIV 176

Query: 639  PNSHVHHIYNSMVNRNDVP 583
            PN HVH I   MVNR DVP
Sbjct: 177  PNPHVHGITTYMVNRPDVP 195



 Score =  162 bits (410), Expect(2) = 1e-85
 Identities = 77/125 (61%), Positives = 96/125 (76%)
 Frame = -2

Query: 532 RMEDLIPILLQYVRSRQKPSGYVVWIAHNARVFDVPFLIKEFNRHSFEIPSNWSFIDTLP 353
           R +DLIPILLQYV SRQKP G ++W+AHN R FDVPFLI EF+R + E+P NW F+DTLP
Sbjct: 196 RWKDLIPILLQYVESRQKPGGLILWVAHNGRSFDVPFLINEFSRCNTEVPPNWRFLDTLP 255

Query: 352 LARELIKSGGENVPPKASVQALREHFEIPQFGAAHRALSDVRCLSLIFQRLIFLLKYTAS 173
           LARELIKS G ++PP AS+QALRE++ IP  G AHR LSDV  LS + Q L F LK + +
Sbjct: 256 LARELIKSAGSDLPPGASLQALREYYRIPLVGPAHRVLSDVYTLSQVLQMLTFNLKVSVA 315

Query: 172 RLIEK 158
            L+++
Sbjct: 316 NLLDR 320


>emb|CBI39565.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score =  175 bits (444), Expect(2) = 1e-83
 Identities = 94/194 (48%), Positives = 124/194 (63%), Gaps = 3/194 (1%)
 Frame = -3

Query: 1155 MCFSLMQFPRCRIHTLSSSWWGCFQQHGQRYTEVHGSKVHCLNKYDPEGGFTRKWIRRTV 976
            MCFS++Q PRCRIHTL+S W   F   G         K+   +    EGG +R+W RR +
Sbjct: 1    MCFSILQVPRCRIHTLASFWRESFHSLGSTCRSSSSFKLLGSHTNGLEGGNSRRWTRRPI 60

Query: 975  TTKTLTGKGSVT---KKTTIQRELTNETLGTSTNAYTPEITELESTQVESVQYYNIQQVV 805
            TTK+  G+   T   K++ I+ E+ + T+ TST      + +LE ++ + +QY  +Q+ V
Sbjct: 61   TTKS-EGRNKYTQSSKRSNIRHEIVDGTVSTSTKLI---VDKLEISESQRIQYCEVQEKV 116

Query: 804  AENKDISKFVTYLVFDIETTGFSRENDRIIEIAIQDLRGGKNSTFQTLVNPGCAIPNSHV 625
             ENKD++K VT +VFD ETTG SR NDRIIEI +QDL GG+NSTFQTLVNP   +PN HV
Sbjct: 117  TENKDLAKLVTVIVFDTETTGLSRANDRIIEIGLQDLGGGENSTFQTLVNPERIVPNPHV 176

Query: 624  HHIYNSMVNRNDVP 583
            H I   MVNR DVP
Sbjct: 177  HGITTYMVNRPDVP 190



 Score =  162 bits (410), Expect(2) = 1e-83
 Identities = 77/125 (61%), Positives = 96/125 (76%)
 Frame = -2

Query: 532 RMEDLIPILLQYVRSRQKPSGYVVWIAHNARVFDVPFLIKEFNRHSFEIPSNWSFIDTLP 353
           R +DLIPILLQYV SRQKP G ++W+AHN R FDVPFLI EF+R + E+P NW F+DTLP
Sbjct: 191 RWKDLIPILLQYVESRQKPGGLILWVAHNGRSFDVPFLINEFSRCNTEVPPNWRFLDTLP 250

Query: 352 LARELIKSGGENVPPKASVQALREHFEIPQFGAAHRALSDVRCLSLIFQRLIFLLKYTAS 173
           LARELIKS G ++PP AS+QALRE++ IP  G AHR LSDV  LS + Q L F LK + +
Sbjct: 251 LARELIKSAGSDLPPGASLQALREYYRIPLVGPAHRVLSDVYTLSQVLQMLTFNLKVSVA 310

Query: 172 RLIEK 158
            L+++
Sbjct: 311 NLLDR 315


>ref|XP_002512483.1| exonuclease, putative [Ricinus communis] gi|223548444|gb|EEF49935.1|
            exonuclease, putative [Ricinus communis]
          Length = 334

 Score =  179 bits (455), Expect(2) = 2e-79
 Identities = 90/200 (45%), Positives = 133/200 (66%), Gaps = 4/200 (2%)
 Frame = -3

Query: 1170 MRTVAMCFSLMQFPRCRIHTLSSSWWGCFQQHGQRYTEVHGSKVHCLNKYDPEGGFTRKW 991
            MR + MCFS++Q PRCR+HT+++ W   F    ++       ++        EGG++R+W
Sbjct: 1    MRIIPMCFSILQVPRCRLHTIANFWQESFHSSARKCGNKSSFRLLASKSDGLEGGYSRRW 60

Query: 990  IRRTVTTKTLTGKGSVT----KKTTIQRELTNETLGTSTNAYTPEITELESTQVESVQYY 823
            IRR V+TKT  G   +T    K T I+ E+ +ET+ TS    T  I++ E ++ ++++Y 
Sbjct: 61   IRRPVSTKT-EGTNKITQYDSKSTNIRHEILDETVSTSA---TLSISKTEISEYQNIRYC 116

Query: 822  NIQQVVAENKDISKFVTYLVFDIETTGFSRENDRIIEIAIQDLRGGKNSTFQTLVNPGCA 643
            +I++ + EN D++K VT +VFD+ETTGFSRE +RIIEIA+QDL GG+NSTFQTL+NPG  
Sbjct: 117  DIRREILENNDLAKLVTVIVFDLETTGFSREYERIIEIALQDLHGGENSTFQTLINPGRI 176

Query: 642  IPNSHVHHIYNSMVNRNDVP 583
            +PNSH+H I   MV +  VP
Sbjct: 177  VPNSHIHGITTHMVCKPHVP 196



 Score =  144 bits (363), Expect(2) = 2e-79
 Identities = 74/123 (60%), Positives = 90/123 (73%)
 Frame = -2

Query: 532 RMEDLIPILLQYVRSRQKPSGYVVWIAHNARVFDVPFLIKEFNRHSFEIPSNWSFIDTLP 353
           RMEDLIPILLQY+RSRQKP GYV+ +AHN R FDVPFLI EF R   ++P NW F+DTLP
Sbjct: 197 RMEDLIPILLQYIRSRQKPGGYVLLVAHNGRSFDVPFLINEFKRSGVDVPCNWLFMDTLP 256

Query: 352 LARELIKSGGENVPPKASVQALREHFEIPQFGAAHRALSDVRCLSLIFQRLIFLLKYTAS 173
           LAR+ +KS G  +   +S+Q LRE F I   G+AHRA+SDVR L+ +FQ L F LK T  
Sbjct: 257 LARKWMKSKGLKI--SSSLQGLREAFGIKLEGSAHRAMSDVRLLAKLFQMLTFNLKTTLP 314

Query: 172 RLI 164
            L+
Sbjct: 315 SLV 317


>ref|XP_003521673.1| PREDICTED: DNA polymerase III polC-type-like [Glycine max]
          Length = 329

 Score =  169 bits (429), Expect(2) = 2e-76
 Identities = 97/198 (48%), Positives = 131/198 (66%), Gaps = 2/198 (1%)
 Frame = -3

Query: 1170 MRTVAMCFSLMQFPRCRIHTLSSSWWGCFQQHGQRYTEVHGSKVHCLNK--YDPEGGFTR 997
            M+T +M FSL   PRCRI +L++ W   F  HG   T  + S +  L    Y  +GG  +
Sbjct: 1    MKTGSMIFSLFHVPRCRIQSLANCWGETF--HGFSTTCGNNSSIRLLGSRIYGLQGGQRK 58

Query: 996  KWIRRTVTTKTLTGKGSVTKKTTIQRELTNETLGTSTNAYTPEITELESTQVESVQYYNI 817
            KW R  +TT T  GKGS TK  +I+ E+ +ET+  +  A    + + +  Q + +Q  +I
Sbjct: 59   KWTR-PITTNT-EGKGS-TKSKSIKHEILSETILANATA---NVNKTQLDQSQEIQDCDI 112

Query: 816  QQVVAENKDISKFVTYLVFDIETTGFSRENDRIIEIAIQDLRGGKNSTFQTLVNPGCAIP 637
            QQ +AENKD+S + T +VFDIETTGFSREN+RIIEIA++DL+GG+NSTFQTLVNP C +P
Sbjct: 113  QQEIAENKDLSSY-TVIVFDIETTGFSRENERIIEIALRDLQGGENSTFQTLVNPQCKVP 171

Query: 636  NSHVHHIYNSMVNRNDVP 583
            NSH+H I   MVN+ DVP
Sbjct: 172  NSHIHGITTQMVNKPDVP 189



 Score =  144 bits (363), Expect(2) = 2e-76
 Identities = 75/125 (60%), Positives = 93/125 (74%)
 Frame = -2

Query: 532 RMEDLIPILLQYVRSRQKPSGYVVWIAHNARVFDVPFLIKEFNRHSFEIPSNWSFIDTLP 353
           RMEDLIPIL QYVRSR+KP G V+++AHNAR FDVPF+I E  R+S +IP NW F+DTLP
Sbjct: 190 RMEDLIPILFQYVRSREKPGGDVLFVAHNARCFDVPFIISELRRYSIKIPPNWLFLDTLP 249

Query: 352 LARELIKSGGENVPPKASVQALREHFEIPQFGAAHRALSDVRCLSLIFQRLIFLLKYTAS 173
           LAREL+KSGG  +   +S+ ALR+ + I   G+AHRA+ DV  LSLI  RL   LK T S
Sbjct: 250 LARELMKSGGTTL-SSSSLAALRDLYGIKVDGSAHRAMVDVNTLSLILSRLTSDLKLTLS 308

Query: 172 RLIEK 158
            L++K
Sbjct: 309 DLVDK 313


>ref|XP_003626171.1| DNA polymerase III polC-type [Medicago truncatula]
            gi|355501186|gb|AES82389.1| DNA polymerase III polC-type
            [Medicago truncatula]
          Length = 332

 Score =  162 bits (411), Expect(2) = 8e-76
 Identities = 90/198 (45%), Positives = 126/198 (63%), Gaps = 2/198 (1%)
 Frame = -3

Query: 1170 MRTVAMCFSLMQFPRCRIHTLSSSWWGCFQQHGQRYTEVHGSKVHCLNK--YDPEGGFTR 997
            M+T +M FS +Q PRCR+H+L+++    F  H       + S V  L    Y  +GG  +
Sbjct: 1    MKTGSMIFSFLQVPRCRLHSLANNCGQTF--HSFSNICENNSSVRLLGSRIYGLQGGHRK 58

Query: 996  KWIRRTVTTKTLTGKGSVTKKTTIQRELTNETLGTSTNAYTPEITELESTQVESVQYYNI 817
            KW RR +TT T    G  TK  + ++E+ +ET+ TS+   T  + + +  Q   +QY +I
Sbjct: 59   KWTRRPITTNTEGSAG--TKSRSTKQEILSETISTSS---TVNVKKTQLGQFPEIQYCDI 113

Query: 816  QQVVAENKDISKFVTYLVFDIETTGFSRENDRIIEIAIQDLRGGKNSTFQTLVNPGCAIP 637
             Q +A+NKD+S  VT +VFDIETTGFSREN+RIIEIA++DL+GG NSTFQT VNP  ++ 
Sbjct: 114  HQEIAQNKDLSSLVTVIVFDIETTGFSRENERIIEIALRDLQGGPNSTFQTFVNPQRSVY 173

Query: 636  NSHVHHIYNSMVNRNDVP 583
            NSH+H I   MV+R  VP
Sbjct: 174  NSHIHGITTQMVSRPGVP 191



 Score =  149 bits (376), Expect(2) = 8e-76
 Identities = 74/125 (59%), Positives = 92/125 (73%)
 Frame = -2

Query: 532 RMEDLIPILLQYVRSRQKPSGYVVWIAHNARVFDVPFLIKEFNRHSFEIPSNWSFIDTLP 353
           RMEDL+PIL  YV+SR+KP GYV+W+ HNARVFDVPF+I EF R S +IP NW F+DTLP
Sbjct: 192 RMEDLVPILFHYVKSREKPRGYVLWVGHNARVFDVPFIINEFRRCSTQIPPNWLFVDTLP 251

Query: 352 LARELIKSGGENVPPKASVQALREHFEIPQFGAAHRALSDVRCLSLIFQRLIFLLKYTAS 173
           LAR+L+KS G  + P  S+ +LR+ +EI   G AHRA+ DV  LSLI  +L   LK T S
Sbjct: 252 LARQLMKSEGTKL-PSVSLDSLRKFYEIKVDGPAHRAMEDVNTLSLILPKLTCDLKLTLS 310

Query: 172 RLIEK 158
            L+EK
Sbjct: 311 GLVEK 315