BLASTX nr result

ID: Lithospermum22_contig00009249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00009249
         (851 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P23326.1|RK35_SPIOL RecName: Full=50S ribosomal protein L35, ...   138   2e-30
ref|XP_003610263.1| 50S ribosomal protein L35 [Medicago truncatu...   138   2e-30
gb|AFK37785.1| unknown [Lotus japonicus] gi|388516355|gb|AFK4623...   136   5e-30
ref|XP_002324518.1| predicted protein [Populus trichocarpa] gi|2...   135   9e-30
gb|ABK93832.1| unknown [Populus trichocarpa]                          135   9e-30

>sp|P23326.1|RK35_SPIOL RecName: Full=50S ribosomal protein L35, chloroplastic; AltName:
           Full=CL35; Flags: Precursor gi|189096153|pdb|3BBO|5
           Chain 5, Homology Model For The Spinach Chloroplast 50s
           Subunit Fitted To 9.4a Cryo-Em Map Of The 70s
           Chlororibosome gi|170139|gb|AAA34043.1| ribosomal
           protein L35 [Spinacia oleracea]
          Length = 159

 Score =  138 bits (347), Expect = 2e-30
 Identities = 68/78 (87%), Positives = 73/78 (93%)
 Frame = +3

Query: 297 SSTIVAAKGYKMKTHKASAKRFRVTGSGKIVRRRAGKQHLLGKKNTKRKLRLSKMVQVDR 476
           S T+ AAKGYKMKTHKASAKRFRVTG GKIVRRRAGKQHLL KKNTKRK RLSK++QVDR
Sbjct: 81  SFTVFAAKGYKMKTHKASAKRFRVTGKGKIVRRRAGKQHLLAKKNTKRKNRLSKLIQVDR 140

Query: 477 SDYNNVIGALPYLKVNRQ 530
           SDY+NVIGALPYLKVNR+
Sbjct: 141 SDYDNVIGALPYLKVNRK 158


>ref|XP_003610263.1| 50S ribosomal protein L35 [Medicago truncatula]
           gi|217071304|gb|ACJ84012.1| unknown [Medicago
           truncatula] gi|355511318|gb|AES92460.1| 50S ribosomal
           protein L35 [Medicago truncatula]
           gi|388495356|gb|AFK35744.1| unknown [Medicago
           truncatula]
          Length = 148

 Score =  138 bits (347), Expect = 2e-30
 Identities = 69/78 (88%), Positives = 75/78 (96%)
 Frame = +3

Query: 297 SSTIVAAKGYKMKTHKASAKRFRVTGSGKIVRRRAGKQHLLGKKNTKRKLRLSKMVQVDR 476
           S TIV+AKGYKMKTHKASAKRFRVTG+GKIVRRRAGKQHLL KKN KRKLRLSKM+QV+R
Sbjct: 69  SLTIVSAKGYKMKTHKASAKRFRVTGAGKIVRRRAGKQHLLYKKNKKRKLRLSKMIQVNR 128

Query: 477 SDYNNVIGALPYLKVNRQ 530
           SDY+NVIGALPYLKVNR+
Sbjct: 129 SDYDNVIGALPYLKVNRK 146


>gb|AFK37785.1| unknown [Lotus japonicus] gi|388516355|gb|AFK46239.1| unknown
           [Lotus japonicus]
          Length = 148

 Score =  136 bits (343), Expect = 5e-30
 Identities = 70/77 (90%), Positives = 72/77 (93%)
 Frame = +3

Query: 297 SSTIVAAKGYKMKTHKASAKRFRVTGSGKIVRRRAGKQHLLGKKNTKRKLRLSKMVQVDR 476
           S TIVAAKGYKMKTHKASAKRFRVTG GKIVRRRAGKQHLL KKNTKRKLRLSKM  V+R
Sbjct: 69  SLTIVAAKGYKMKTHKASAKRFRVTGKGKIVRRRAGKQHLLQKKNTKRKLRLSKMHPVNR 128

Query: 477 SDYNNVIGALPYLKVNR 527
           SDY+NVIGALPYLKVNR
Sbjct: 129 SDYDNVIGALPYLKVNR 145


>ref|XP_002324518.1| predicted protein [Populus trichocarpa] gi|222865952|gb|EEF03083.1|
           predicted protein [Populus trichocarpa]
          Length = 150

 Score =  135 bits (341), Expect = 9e-30
 Identities = 70/89 (78%), Positives = 73/89 (82%)
 Frame = +3

Query: 264 CSFLHHHINHHSSTIVAAKGYKMKTHKASAKRFRVTGSGKIVRRRAGKQHLLGKKNTKRK 443
           CS         S T+ AAKGYKMKTHKASAKRFRVTG GKIVRRRAGKQHLL KKNTKRK
Sbjct: 60  CSITSLTQRFQSLTVFAAKGYKMKTHKASAKRFRVTGKGKIVRRRAGKQHLLAKKNTKRK 119

Query: 444 LRLSKMVQVDRSDYNNVIGALPYLKVNRQ 530
           LRLSKM  V RSDY+NVIGALPYLKVNR+
Sbjct: 120 LRLSKMHPVSRSDYDNVIGALPYLKVNRK 148


>gb|ABK93832.1| unknown [Populus trichocarpa]
          Length = 150

 Score =  135 bits (341), Expect = 9e-30
 Identities = 70/89 (78%), Positives = 73/89 (82%)
 Frame = +3

Query: 264 CSFLHHHINHHSSTIVAAKGYKMKTHKASAKRFRVTGSGKIVRRRAGKQHLLGKKNTKRK 443
           CS         S T+ AAKGYKMKTHKASAKRFRVTG GKIVRRRAGKQHLL KKNTKRK
Sbjct: 60  CSITSLTQRFQSLTVFAAKGYKMKTHKASAKRFRVTGKGKIVRRRAGKQHLLAKKNTKRK 119

Query: 444 LRLSKMVQVDRSDYNNVIGALPYLKVNRQ 530
           LRLSKM  V RSDY+NVIGALPYLKVNR+
Sbjct: 120 LRLSKMHPVSRSDYDNVIGALPYLKVNRK 148


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