BLASTX nr result

ID: Lithospermum22_contig00009232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00009232
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515124.1| pentatricopeptide repeat-containing protein,...   228   4e-58
gb|ACU25729.1| pentatricopeptide repeat-containing protein [Stac...   225   3e-57
gb|ACU25728.1| pentatricopeptide repeat-containing protein [Stac...   224   6e-57
gb|ACU25721.1| pentatricopeptide repeat-containing protein [Neos...   223   1e-56
gb|ACU25720.1| pentatricopeptide repeat-containing protein [Lamp...   223   1e-56

>ref|XP_002515124.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545604|gb|EEF47108.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 898

 Score =  228 bits (581), Expect = 4e-58
 Identities = 110/145 (75%), Positives = 126/145 (86%)
 Frame = +1

Query: 52   WSSSPYMDLLANRISSKSELLRVFSLSRGRRVQDNGADSFDIDMVNTYLSIFLAKGKLSV 231
            WSSSPYMD LAN++ S     + FSL+RG+RVQ  G +SFDIDMVNT+LSIFLAKGKLSV
Sbjct: 576  WSSSPYMDHLANQVKSTDNCSQSFSLARGQRVQAKGVESFDIDMVNTFLSIFLAKGKLSV 635

Query: 232  ACKLFEILSGMGAEPVSYTYNSIMSSFVKRGYFNEAWGILDAMGENICPADIATYNLIIQ 411
            ACKLFEI S MG  PVSYTYNSIMSSFVK+GYF+EAW +L+ MGE +CP+DIATYNLIIQ
Sbjct: 636  ACKLFEIFSDMGVNPVSYTYNSIMSSFVKKGYFSEAWDVLNQMGEKVCPSDIATYNLIIQ 695

Query: 412  GLGRMGRADLASAVLDKLMEHGGYL 486
            GLG+MGRADLAS+VLDKLM+ GGYL
Sbjct: 696  GLGKMGRADLASSVLDKLMKQGGYL 720


>gb|ACU25729.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 429

 Score =  225 bits (573), Expect = 3e-57
 Identities = 113/146 (77%), Positives = 127/146 (86%), Gaps = 1/146 (0%)
 Frame = +1

Query: 52  WSSSPYMDLLANRISSKSELLRV-FSLSRGRRVQDNGADSFDIDMVNTYLSIFLAKGKLS 228
           WSSSPYMD+LA++ +S S   R  FSL+RG RV   G DSFDIDMVNTYLSIFLAKGKLS
Sbjct: 224 WSSSPYMDMLADKFTSDSHHSRKPFSLARGVRVMAKGEDSFDIDMVNTYLSIFLAKGKLS 283

Query: 229 VACKLFEILSGMGAEPVSYTYNSIMSSFVKRGYFNEAWGILDAMGENICPADIATYNLII 408
           VACKLFEI + MG EPVSYTYNSIMSSFVK+GYFNEAWG+L A+GE + PADIATYN+II
Sbjct: 284 VACKLFEIFTTMGVEPVSYTYNSIMSSFVKKGYFNEAWGVLHAIGETVYPADIATYNVII 343

Query: 409 QGLGRMGRADLASAVLDKLMEHGGYL 486
           QGLG+MGRADLA+AVLDKLM+ GGYL
Sbjct: 344 QGLGKMGRADLANAVLDKLMKEGGYL 369


>gb|ACU25728.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 426

 Score =  224 bits (571), Expect = 6e-57
 Identities = 112/146 (76%), Positives = 127/146 (86%), Gaps = 1/146 (0%)
 Frame = +1

Query: 52  WSSSPYMDLLANRISSKSELLRV-FSLSRGRRVQDNGADSFDIDMVNTYLSIFLAKGKLS 228
           WSSSPYMD+LA++ +S S   R  FSL+RG RV   G DSFDIDMVNTYLSIFLAKGKLS
Sbjct: 224 WSSSPYMDMLADKFTSDSHHSRKPFSLARGVRVMAKGEDSFDIDMVNTYLSIFLAKGKLS 283

Query: 229 VACKLFEILSGMGAEPVSYTYNSIMSSFVKRGYFNEAWGILDAMGENICPADIATYNLII 408
           VACKLFEI + MG EPVSYTYNSIMSSFVK+GYFNEAWG+L A+GE + PADIATYN++I
Sbjct: 284 VACKLFEIFTTMGVEPVSYTYNSIMSSFVKKGYFNEAWGVLHAIGETVYPADIATYNVLI 343

Query: 409 QGLGRMGRADLASAVLDKLMEHGGYL 486
           QGLG+MGRADLA+AVLDKLM+ GGYL
Sbjct: 344 QGLGKMGRADLANAVLDKLMKEGGYL 369


>gb|ACU25721.1| pentatricopeptide repeat-containing protein [Neosparton
           ephedroides]
          Length = 310

 Score =  223 bits (569), Expect = 1e-56
 Identities = 111/146 (76%), Positives = 126/146 (86%), Gaps = 1/146 (0%)
 Frame = +1

Query: 52  WSSSPYMDLLANRISSKSE-LLRVFSLSRGRRVQDNGADSFDIDMVNTYLSIFLAKGKLS 228
           WSSSPYMD+LAN+ +S S    + FSL+RG RV   G DSFDIDMVNTYLSIFLAKGKLS
Sbjct: 103 WSSSPYMDMLANKFTSYSHHSWQSFSLARGVRVMAKGEDSFDIDMVNTYLSIFLAKGKLS 162

Query: 229 VACKLFEILSGMGAEPVSYTYNSIMSSFVKRGYFNEAWGILDAMGENICPADIATYNLII 408
           +ACKLFEI + MG +PVSYTYNSIMSSFVK+GYF EAWG+L AMGE + PADIATYN+II
Sbjct: 163 IACKLFEIFTNMGVDPVSYTYNSIMSSFVKKGYFKEAWGVLHAMGETVNPADIATYNVII 222

Query: 409 QGLGRMGRADLASAVLDKLMEHGGYL 486
           QGLG+MGRADLA+AVLDKLM+ GGYL
Sbjct: 223 QGLGKMGRADLANAVLDKLMKEGGYL 248


>gb|ACU25720.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
          Length = 311

 Score =  223 bits (568), Expect = 1e-56
 Identities = 111/146 (76%), Positives = 126/146 (86%), Gaps = 1/146 (0%)
 Frame = +1

Query: 52  WSSSPYMDLLANRISSKSE-LLRVFSLSRGRRVQDNGADSFDIDMVNTYLSIFLAKGKLS 228
           WSSSPYMD+LAN+++S S    + FSL+RG RV   G DSFDIDMVNTYLSIFLAKGKLS
Sbjct: 104 WSSSPYMDMLANKVTSYSHHSWQSFSLARGVRVMAKGEDSFDIDMVNTYLSIFLAKGKLS 163

Query: 229 VACKLFEILSGMGAEPVSYTYNSIMSSFVKRGYFNEAWGILDAMGENICPADIATYNLII 408
           +ACKLFEI + MG +PVSYTYNSIMSSFVK+GYF EAWG+L AMGE   PADIATYN+II
Sbjct: 164 IACKLFEIFTNMGVDPVSYTYNSIMSSFVKKGYFKEAWGVLHAMGETXNPADIATYNVII 223

Query: 409 QGLGRMGRADLASAVLDKLMEHGGYL 486
           QGLG+MGRADLA+AVLDKLM+ GGYL
Sbjct: 224 QGLGKMGRADLANAVLDKLMKEGGYL 249


Top