BLASTX nr result

ID: Lithospermum22_contig00009198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00009198
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB86262.1| unknown [Solanum tuberosum]                             69   4e-10
ref|XP_002513501.1| heterogeneous nuclear ribonucleoprotein, put...    68   7e-10
gb|AFK40386.1| unknown [Medicago truncatula]                           68   9e-10
ref|XP_003600475.1| Heterogeneous nuclear ribonucleoprotein F [M...    68   9e-10
ref|XP_003532209.1| PREDICTED: heterogeneous nuclear ribonucleop...    64   1e-08

>gb|ABB86262.1| unknown [Solanum tuberosum]
          Length = 364

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 40/98 (40%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
 Frame = +1

Query: 169 YLDAGDPREMGMKRQRLME-GXXXXXXXXXXXXXXNXXXXXXXXXXXXXXXXXXXXXXXV 345
           Y+D+GD REMG KRQR+M+ G              N                       V
Sbjct: 7   YMDSGDAREMGFKRQRIMDQGSSYYATPPGSSYMYNPPPPPPPPSYSYHGQPPPFPV--V 64

Query: 346 RLRGLPFDCTETDITDFFHGXXXXXXXXXHKGGRFSGE 459
           RLRGLPFDC+ET+I DF HG         HKGGRF+GE
Sbjct: 65  RLRGLPFDCSETEIADFLHGLDVVDVLLVHKGGRFTGE 102


>ref|XP_002513501.1| heterogeneous nuclear ribonucleoprotein, putative [Ricinus
           communis] gi|223547409|gb|EEF48904.1| heterogeneous
           nuclear ribonucleoprotein, putative [Ricinus communis]
          Length = 260

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 38/98 (38%), Positives = 46/98 (46%)
 Frame = +1

Query: 166 KYLDAGDPREMGMKRQRLMEGXXXXXXXXXXXXXXNXXXXXXXXXXXXXXXXXXXXXXXV 345
           +Y D GD REMG KRQRL++               +                       V
Sbjct: 9   RYPDGGDGREMGAKRQRLVD-------QGPSYYGTSPGPSFMYNPPPYGYVAQPPPFPVV 61

Query: 346 RLRGLPFDCTETDITDFFHGXXXXXXXXXHKGGRFSGE 459
           RLRGLPFDCTETD+ +FFHG         HKGG+F+GE
Sbjct: 62  RLRGLPFDCTETDVAEFFHGLDIVDVLFVHKGGKFTGE 99


>gb|AFK40386.1| unknown [Medicago truncatula]
          Length = 259

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 38/98 (38%), Positives = 44/98 (44%)
 Frame = +1

Query: 166 KYLDAGDPREMGMKRQRLMEGXXXXXXXXXXXXXXNXXXXXXXXXXXXXXXXXXXXXXXV 345
           K+ D GD REM  KRQR ++               N                       V
Sbjct: 6   KFADGGDGREMASKRQRTVDAGSSFYGSPGSSYMYNPSPYGYVSQPPPPPFPV------V 59

Query: 346 RLRGLPFDCTETDITDFFHGXXXXXXXXXHKGGRFSGE 459
           RLRGLPFDCTETD+ +FFHG         HKGG+FSGE
Sbjct: 60  RLRGLPFDCTETDVAEFFHGLDIVDVLFVHKGGKFSGE 97


>ref|XP_003600475.1| Heterogeneous nuclear ribonucleoprotein F [Medicago truncatula]
           gi|355489523|gb|AES70726.1| Heterogeneous nuclear
           ribonucleoprotein F [Medicago truncatula]
          Length = 259

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 38/98 (38%), Positives = 44/98 (44%)
 Frame = +1

Query: 166 KYLDAGDPREMGMKRQRLMEGXXXXXXXXXXXXXXNXXXXXXXXXXXXXXXXXXXXXXXV 345
           K+ D GD REM  KRQR ++               N                       V
Sbjct: 6   KFADGGDGREMASKRQRTVDAGSSFYGSPGSSYMYNPSPYGYVSQPPPPPFPV------V 59

Query: 346 RLRGLPFDCTETDITDFFHGXXXXXXXXXHKGGRFSGE 459
           RLRGLPFDCTETD+ +FFHG         HKGG+FSGE
Sbjct: 60  RLRGLPFDCTETDVAEFFHGLDIVDVLFVHKGGKFSGE 97


>ref|XP_003532209.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Glycine
           max]
          Length = 260

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 38/99 (38%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
 Frame = +1

Query: 166 KYLDAGDPREMGMKRQRLME-GXXXXXXXXXXXXXXNXXXXXXXXXXXXXXXXXXXXXXX 342
           K+ D GD REM  KRQR ++ G              N                       
Sbjct: 6   KFADGGDGREMAAKRQRTVDPGSSFYGASTGSNFMYNPSPYGYVSQPPPPPFPV------ 59

Query: 343 VRLRGLPFDCTETDITDFFHGXXXXXXXXXHKGGRFSGE 459
           VRLRGLPFDCTETD+ +FFHG         HKGG+F+GE
Sbjct: 60  VRLRGLPFDCTETDVAEFFHGLDIVDVLFVHKGGKFTGE 98


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